; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16439 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16439
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:7433118..7433645
RNA-Seq ExpressionCarg16439
SyntenyCarg16439
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020835.1 hypothetical protein SDJN02_17523, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-91100Show/hide
Query:  MFESKHIENQISAVDCSSVNGDGDETRKRIATAEIRRDDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSSSIFSITRT
        MFESKHIENQISAVDCSSVNGDGDETRKRIATAEIRRDDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSSSIFSITRT
Subjt:  MFESKHIENQISAVDCSSVNGDGDETRKRIATAEIRRDDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSSSIFSITRT

Query:  NSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHLGIFLVLLVHIS
        NSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHLGIFLVLLVHIS
Subjt:  NSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHLGIFLVLLVHIS

XP_011648888.1 uncharacterized protein LOC101216013 [Cucumis sativus]7.6e-5470.52Show/hide
Query:  MFESKHIENQISAVDCSSVNGDG----DETRKRIATAEIRRDDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSSSIFS
        M ES+H EN IS V CS VN DG    DETR  +A  +IR        DD+ DDD KME+GKKGFGKAKQVMFYPFRKAKKQILR RIKR SSCSSS  S
Subjt:  MFESKHIENQISAVDCSSVNGDG----DETRKRIATAEIRRDDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSSSIFS

Query:  IT---RTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHLGI
        +T   RTNS DK  +D SVNQGCGFC  K SISDSKNGSPTDPNH KFT+EMLKVLIEKNDFYSKESNPH  +
Subjt:  IT---RTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHLGI

XP_022937511.1 uncharacterized protein LOC111443901 [Cucurbita moschata]6.0e-8398.18Show/hide
Query:  MFESKHIENQISAVDCSSVNGDGDETRKRIATAEIRR-DDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSSSIFSITR
        MFESKHIENQISAVDCSSVNGDGDE RKRIATAEIRR DDDDDDDDDDDDDDGK EIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSSSIFSITR
Subjt:  MFESKHIENQISAVDCSSVNGDGDETRKRIATAEIRR-DDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSSSIFSITR

Query:  TNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHL
        TNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHL
Subjt:  TNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHL

XP_022969627.1 uncharacterized protein LOC111468598 [Cucurbita maxima]6.6e-8296.45Show/hide
Query:  MFESKHIENQISAVDCSSVNGDGDETRKRIATAEIRR-DDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRT----SSCSSSIF
        MFESKHIENQISAVDCSSVNGDGDETRKRIATAEIRR DDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRT    SSCSSSIF
Subjt:  MFESKHIENQISAVDCSSVNGDGDETRKRIATAEIRR-DDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRT----SSCSSSIF

Query:  SITRTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHL
        SITRTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFT+EMLKVLIEKNDFYSKESNPHL
Subjt:  SITRTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHL

XP_023537897.1 uncharacterized protein LOC111798795 [Cucurbita pepo subsp. pepo]6.6e-8296.45Show/hide
Query:  MFESKHIENQISAVDCSSVNGDGDETRKRIATAEIRRDDDDDDDDDDDDD-DGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRT----SSCSSSIF
        MFESKHIENQISAVDCSSVNGDGDE RKRIATAEIRRDDDDDDDDDDDDD DGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRT    SSCSSSIF
Subjt:  MFESKHIENQISAVDCSSVNGDGDETRKRIATAEIRRDDDDDDDDDDDDD-DGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRT----SSCSSSIF

Query:  SITRTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHL
        SITRTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHL
Subjt:  SITRTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHL

TrEMBL top hitse value%identityAlignment
A0A0A0LH19 Uncharacterized protein3.7e-5470.52Show/hide
Query:  MFESKHIENQISAVDCSSVNGDG----DETRKRIATAEIRRDDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSSSIFS
        M ES+H EN IS V CS VN DG    DETR  +A  +IR        DD+ DDD KME+GKKGFGKAKQVMFYPFRKAKKQILR RIKR SSCSSS  S
Subjt:  MFESKHIENQISAVDCSSVNGDG----DETRKRIATAEIRRDDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSSSIFS

Query:  IT---RTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHLGI
        +T   RTNS DK  +D SVNQGCGFC  K SISDSKNGSPTDPNH KFT+EMLKVLIEKNDFYSKESNPH  +
Subjt:  IT---RTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHLGI

A0A1S3BWA1 uncharacterized protein LOC1034938249.0e-5367.6Show/hide
Query:  MFESKHIENQISAVDCSSVNGDG----DETRKRIATAEIRRDDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSS----
        M ES+H EN IS V CS VN DG    DETR  +A  +IR        DD+ DDD KME+GKKGFGKAKQVMFYPFRKAKKQILR RIKR SSCSS    
Subjt:  MFESKHIENQISAVDCSSVNGDG----DETRKRIATAEIRRDDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSS----

Query:  -----SIFSITRTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHLGI
             S+    RTNS DK  +D SVNQGCGFC  K SISDSKNGSPTDPNH KFT+EMLKVLIEKNDFYSKESNPHL +
Subjt:  -----SIFSITRTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHLGI

A0A6J1FAJ4 uncharacterized protein LOC1114439012.9e-8398.18Show/hide
Query:  MFESKHIENQISAVDCSSVNGDGDETRKRIATAEIRR-DDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSSSIFSITR
        MFESKHIENQISAVDCSSVNGDGDE RKRIATAEIRR DDDDDDDDDDDDDDGK EIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSSSIFSITR
Subjt:  MFESKHIENQISAVDCSSVNGDGDETRKRIATAEIRR-DDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSSSIFSITR

Query:  TNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHL
        TNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHL
Subjt:  TNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHL

A0A6J1HWU1 uncharacterized protein LOC1114685983.2e-8296.45Show/hide
Query:  MFESKHIENQISAVDCSSVNGDGDETRKRIATAEIRR-DDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRT----SSCSSSIF
        MFESKHIENQISAVDCSSVNGDGDETRKRIATAEIRR DDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRT    SSCSSSIF
Subjt:  MFESKHIENQISAVDCSSVNGDGDETRKRIATAEIRR-DDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRT----SSCSSSIF

Query:  SITRTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHL
        SITRTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFT+EMLKVLIEKNDFYSKESNPHL
Subjt:  SITRTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHL

A0A6J1KI22 uncharacterized protein LOC1114940222.9e-4361.93Show/hide
Query:  MFESKHIENQISAVDCSSVNGDGD----ETRKRIATAEIRRDDDDDDDDDDDDDDGKMEIGK-KGFGKAKQVMFYPFRKAKKQILRCRIKR-TSSC--SS
        M ES + EN +S V CS VN DGD    E RK +A  +I   D                +GK KGFGKAK+VM YPFRKAKKQILR RIKR +SSC  SS
Subjt:  MFESKHIENQISAVDCSSVNGDGD----ETRKRIATAEIRRDDDDDDDDDDDDDDGKMEIGK-KGFGKAKQVMFYPFRKAKKQILRCRIKR-TSSC--SS

Query:  SIFSITRTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHLGIFL
        S+    RT+S DK V+D SVNQGCGFCF K SISDSKNG PTDPNH KFT+EMLKVLIEKNDFYSKESNPHL + +
Subjt:  SIFSITRTNSWDKSVYDASVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHLGIFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGAATCAAAACATATTGAAAACCAAATCTCAGCTGTTGATTGCAGTAGCGTTAATGGCGATGGCGACGAGACTCGTAAAAGAATCGCGACGGCCGAAATCAGGCG
CGATGATGATGATGACGACGACGACGACGACGACGATGACGATGGAAAAATGGAGATCGGTAAAAAAGGCTTTGGAAAAGCGAAACAGGTGATGTTCTATCCATTTCGAA
AGGCGAAGAAACAGATTCTTCGGTGTAGGATTAAGAGGACCTCTTCTTGTTCTTCTTCGATTTTTAGTATTACAAGAACAAATTCTTGGGATAAGAGTGTTTATGATGCG
AGTGTAAATCAAGGCTGTGGTTTCTGTTTTGCGAAACATTCAATTTCAGATTCTAAGAATGGATCTCCGACTGATCCGAATCATCCGAAGTTCACTGATGAAATGTTGAA
AGTTCTTATTGAAAAGAATGATTTCTATTCCAAAGAATCCAATCCTCATTTGGGTATATTCCTCGTTCTTCTTGTTCATATATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGAATCAAAACATATTGAAAACCAAATCTCAGCTGTTGATTGCAGTAGCGTTAATGGCGATGGCGACGAGACTCGTAAAAGAATCGCGACGGCCGAAATCAGGCG
CGATGATGATGATGACGACGACGACGACGACGACGATGACGATGGAAAAATGGAGATCGGTAAAAAAGGCTTTGGAAAAGCGAAACAGGTGATGTTCTATCCATTTCGAA
AGGCGAAGAAACAGATTCTTCGGTGTAGGATTAAGAGGACCTCTTCTTGTTCTTCTTCGATTTTTAGTATTACAAGAACAAATTCTTGGGATAAGAGTGTTTATGATGCG
AGTGTAAATCAAGGCTGTGGTTTCTGTTTTGCGAAACATTCAATTTCAGATTCTAAGAATGGATCTCCGACTGATCCGAATCATCCGAAGTTCACTGATGAAATGTTGAA
AGTTCTTATTGAAAAGAATGATTTCTATTCCAAAGAATCCAATCCTCATTTGGGTATATTCCTCGTTCTTCTTGTTCATATATCTTGA
Protein sequenceShow/hide protein sequence
MFESKHIENQISAVDCSSVNGDGDETRKRIATAEIRRDDDDDDDDDDDDDDGKMEIGKKGFGKAKQVMFYPFRKAKKQILRCRIKRTSSCSSSIFSITRTNSWDKSVYDA
SVNQGCGFCFAKHSISDSKNGSPTDPNHPKFTDEMLKVLIEKNDFYSKESNPHLGIFLVLLVHIS