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Carg16468 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16468
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein RALF-like 10
Genome locationCarg_Chr12:7670002..7670950
RNA-Seq ExpressionCarg16468
SyntenyCarg16468
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020863.1 hypothetical protein SDJN02_17551, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-1157.81Show/hide
Query:  MVMTSPEVLADEE------FLKLSECQHPNPPSHC-LAGNRGFIPVPANPYDRGCSATSRCRGG
        M+MTS +V+ ++E      +LK  EC HPNPP+HC L+G +G+  VPANPYDRGCSA  RCRGG
Subjt:  MVMTSPEVLADEE------FLKLSECQHPNPPSHC-LAGNRGFIPVPANPYDRGCSATSRCRGG
KAG7020864.1 hypothetical protein SDJN02_17552, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-36100Show/hide
Query:  MDDEQASTHHVVPTCMVMTSPEVLADEEFLKLSECQHPNPPSHCLAGNRGFIPVPANPYDRGCSATSRCRGGG
        MDDEQASTHHVVPTCMVMTSPEVLADEEFLKLSECQHPNPPSHCLAGNRGFIPVPANPYDRGCSATSRCRGGG
Subjt:  MDDEQASTHHVVPTCMVMTSPEVLADEEFLKLSECQHPNPPSHCLAGNRGFIPVPANPYDRGCSATSRCRGGG
XP_022947821.1 protein RALF-like 10 [Cucurbita moschata]3.2e-0651.72Show/hide
Query:  MVMTSPEVLADEEFLKLSE-CQHPNPPSHCLAGNRGFIPVPANPYDRGCSATSRCRGG
        M++ S +V ++ +FLK  + CQ PNPP  C  GN     VPANPY RGCS  +RCRGG
Subjt:  MVMTSPEVLADEEFLKLSE-CQHPNPPSHCLAGNRGFIPVPANPYDRGCSATSRCRGG
XP_023533089.1 protein RALF-like 10 [Cucurbita pepo subsp. pepo]1.4e-0650.79Show/hide
Query:  VVPTCMVMTSPEVLADEEFLKLSE-CQHPNPPSHCLAGNRGFIPVPANPYDRGCSATSRCRGG
        +V   M++ S EV ++ +FLK  + CQ PNPP  C  GN     VPANPY RGCS  +RCRGG
Subjt:  VVPTCMVMTSPEVLADEEFLKLSE-CQHPNPPSHCLAGNRGFIPVPANPYDRGCSATSRCRGG
XP_038877580.1 protein RALF-like 11 [Benincasa hispida]6.7e-0446.03Show/hide
Query:  VVPTCMVMTSPEVLADEEFLK-LSECQHPNPPSHCLAGNRGFIPVPANPYDRGCSATSRCRGG
        VV   M++  P V A++++L+ L  C  PNPP  C         V ANPY+RGCSA  RCRGG
Subjt:  VVPTCMVMTSPEVLADEEFLK-LSECQHPNPPSHCLAGNRGFIPVPANPYDRGCSATSRCRGG
TrEMBL top hitse value%identityAlignment
A0A0A0LZK3 Uncharacterized protein5.5e-0446.55Show/hide
Query:  MVMTSPEVLADEEFLKLSE-CQHPNPPSHCLAGNRGFIPVPANPYDRGCSATSRCRGG
        M++ S EV A+ +FL  S+ C  P+PP  C    R   P+   PYDRGCS   RCRGG
Subjt:  MVMTSPEVLADEEFLKLSE-CQHPNPPSHCLAGNRGFIPVPANPYDRGCSATSRCRGG
A0A6J1G7J2 protein RALF-like 101.6e-0651.72Show/hide
Query:  MVMTSPEVLADEEFLKLSE-CQHPNPPSHCLAGNRGFIPVPANPYDRGCSATSRCRGG
        M++ S +V ++ +FLK  + CQ PNPP  C  GN     VPANPY RGCS  +RCRGG
Subjt:  MVMTSPEVLADEEFLKLSE-CQHPNPPSHCLAGNRGFIPVPANPYDRGCSATSRCRGG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G19020.1 ralf-like 107.1e-0445Show/hide
Query:  LSECQHPNPPSHCL-AGNRGFIPVPANPYDRGCSATSRCR
        +++C  PNPP  C   G +   P PAN Y RGCS  +RC+
Subjt:  LSECQHPNPPSHCL-AGNRGFIPVPANPYDRGCSATSRCR
AT3G25170.1 ralf-like 262.5e-0435.94Show/hide
Query:  VVPTCMVMTSPEVLADEEFLK---LSECQHPNPPSHCLAGNRGFIP-VPANPYDRGCSATSRCR
        V+   +V+   E     ++L    L  C+ PNPP+ C   N    P VP + Y RGCS  +RCR
Subjt:  VVPTCMVMTSPEVLADEEFLK---LSECQHPNPPSHCLAGNRGFIP-VPANPYDRGCSATSRCR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACGAGCAGGCTAGCACTCACCATGTTGTCCCCACCTGCATGGTGATGACGAGCCCAGAAGTACTAGCAGATGAGGAATTTCTTAAACTTTCAGAATGTCAACA
CCCTAACCCACCTTCACATTGTTTAGCCGGAAATAGGGGTTTTATACCTGTTCCTGCTAATCCCTATGATCGAGGATGCTCTGCTACCAGTCGTTGTCGAGGAGGAGGAT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGATGACGAGCAGGCTAGCACTCACCATGTTGTCCCCACCTGCATGGTGATGACGAGCCCAGAAGTACTAGCAGATGAGGAATTTCTTAAACTTTCAGAATGTCAACA
CCCTAACCCACCTTCACATTGTTTAGCCGGAAATAGGGGTTTTATACCTGTTCCTGCTAATCCCTATGATCGAGGATGCTCTGCTACCAGTCGTTGTCGAGGAGGAGGAT
GA
Protein sequenceShow/hide protein sequence
MDDEQASTHHVVPTCMVMTSPEVLADEEFLKLSECQHPNPPSHCLAGNRGFIPVPANPYDRGCSATSRCRGGG