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Carg16487 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16487
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionsec-independent protein translocase protein TATA, chloroplastic
Genome locationCarg_Chr12:7840933..7847105
RNA-Seq ExpressionCarg16487
SyntenyCarg16487
Gene Ontology termsGO:0032594 - protein transport within lipid bilayer (biological process)
GO:0043953 - protein transport by the Tat complex (biological process)
GO:0051260 - protein homooligomerization (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0033281 - TAT protein transport complex (cellular component)
InterPro domainsIPR003369 - Sec-independent protein translocase protein TatA/B/E
IPR006312 - Sec-independent protein translocase protein TatA/E


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588320.1 Sec-independent protein translocase protein TATA, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.0e-7398.73Show/hide
Query:  MVISSVTLSFTSSIPRLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
        MVISS TLSFTSSIPRLPSFSPPFSSSKSSFF+NNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
Subjt:  MVISSVTLSFTSSIPRLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV

Query:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV
        GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV
Subjt:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV

KAG7020882.1 Sec-independent protein translocase protein TATA, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-74100Show/hide
Query:  MVISSVTLSFTSSIPRLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
        MVISSVTLSFTSSIPRLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
Subjt:  MVISSVTLSFTSSIPRLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV

Query:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV
        GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV
Subjt:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV

XP_022932561.1 sec-independent protein translocase protein TATA, chloroplastic [Cucurbita moschata]1.6e-7196.82Show/hide
Query:  MVISSVTLSFTSSIPRLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
        MVISS TLSFTSSIPRLPSFSPPFSSSKSSFFANN TANSFNKGDHSHS LLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
Subjt:  MVISSVTLSFTSSIPRLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV

Query:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV
        GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKP S+DDEEKQDLKVSNQKESV
Subjt:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV

XP_022969040.1 sec-independent protein translocase protein TATA, chloroplastic [Cucurbita maxima]9.4e-7297.45Show/hide
Query:  MVISSVTLSFTSSIPRLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
        MVISS TLSFTSSIPRLPSFSPP SSSKSSFFANN TANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
Subjt:  MVISSVTLSFTSSIPRLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV

Query:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV
        GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLK SNQKESV
Subjt:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV

XP_023529222.1 sec-independent protein translocase protein TATA, chloroplastic [Cucurbita pepo subsp. pepo]3.2e-7298.09Show/hide
Query:  MVISSVTLSFTSSIPRLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
        MVISS TLSFTSSIPRLPSFSPPFSSSKSSFFANN TANSFNKGDHSHS LLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
Subjt:  MVISSVTLSFTSSIPRLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV

Query:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV
        GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV
Subjt:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV

TrEMBL top hitse value%identityAlignment
A0A0A0LWL1 Uncharacterized protein8.7e-5580.38Show/hide
Query:  MVISSVTLSFTSSIPRL-PSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPE
        MVISS TLSFTSSIP+L PS SP FSSSKS+FFANN T + F  GDH+HSSLLR T  R T    HKG TCNALFGLGVPELVVIAGVAALVFGPKKLPE
Subjt:  MVISSVTLSFTSSIPRL-PSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPE

Query:  VGKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV
        VGKSIGKTVKSFQQAAKEFESELKKEPE   ET+VEKPTS + EE+QDLKVSNQKE+V
Subjt:  VGKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV

A0A1S3BPB0 sec-independent protein translocase protein TATA, chloroplastic1.1e-5479.75Show/hide
Query:  MVISSVTLSFTSSIPRL-PSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPE
        MVIS+ TLSFTSSIP+L PS SP FSSSKS+FFANN T + F  GDH+HSSLLR T  R T    HKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPE
Subjt:  MVISSVTLSFTSSIPRL-PSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPE

Query:  VGKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV
        VGKSIGKTVKSFQQAAKEFESELKKEPE   ET+VEKPTS + E++QDLKVSNQKE+V
Subjt:  VGKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV

A0A5D3CIV6 Sec-independent protein translocase protein TATA5.8e-5176.28Show/hide
Query:  MVISSVTLSFTSSIPRL-PSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPE
        MVIS+ TLSFTSSIP+L PS SP FSSSKS+FFANN T + F  GDH+HSSLLR T  R T    HKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPE
Subjt:  MVISSVTLSFTSSIPRL-PSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPE

Query:  VGKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKE
        VGKSIGKTVKSFQQAAKEFESELKKEPE   ET+VEKPTS + E++QDLK+   ++
Subjt:  VGKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKE

A0A6J1EWP2 sec-independent protein translocase protein TATA, chloroplastic7.8e-7296.82Show/hide
Query:  MVISSVTLSFTSSIPRLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
        MVISS TLSFTSSIPRLPSFSPPFSSSKSSFFANN TANSFNKGDHSHS LLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
Subjt:  MVISSVTLSFTSSIPRLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV

Query:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV
        GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKP S+DDEEKQDLKVSNQKESV
Subjt:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV

A0A6J1HYU6 sec-independent protein translocase protein TATA, chloroplastic4.6e-7297.45Show/hide
Query:  MVISSVTLSFTSSIPRLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
        MVISS TLSFTSSIPRLPSFSPP SSSKSSFFANN TANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV
Subjt:  MVISSVTLSFTSSIPRLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEV

Query:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV
        GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLK SNQKESV
Subjt:  GKSIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV

SwissProt top hitse value%identityAlignment
Q31RR1 Sec-independent protein translocase protein TatA1.8e-1247.13Show/hide
Query:  FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE----PESIGETAVEKPTSVDDEEKQDLKVSNQKES
        FG+G+PE++VI  +A LVFGPKKLPE+G+S+GK ++ FQ A++EFESE+K+E    P +  E  VE P  +D    + + V  Q E+
Subjt:  FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE----PESIGETAVEKPTSVDDEEKQDLKVSNQKES

Q75GK3 Sec-independent protein translocase protein TATA, chloroplastic7.9e-2153.6Show/hide
Query:  ANSFNKGDHSHSSLLRTTRSRKTMDRAHKG---LTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPESIGETAV
        A+SF  G     ++    R+R       +G   + C  LFGLGVPELVVIAGVAALVFGPK+LPE+G+SIGKTVKSFQQAAKEFE+ELKKE +  G+   
Subjt:  ANSFNKGDHSHSSLLRTTRSRKTMDRAHKG---LTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPESIGETAV

Query:  EKPTSV---DDEEKQDLKVSNQKES
          PT     D  E+++L+ S+ KES
Subjt:  EKPTSV---DDEEKQDLKVSNQKES

Q9LKU2 Sec-independent protein translocase protein TATA, chloroplastic1.6e-2657.86Show/hide
Query:  PSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKE
        P   P  SSS+SSFF+N  T  +      S  ++ R  R   T     K LTCNALFGLGVPEL VIAGVAAL+FGPKKLPE+GKSIGKTVKSFQQAAKE
Subjt:  PSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKE

Query:  FESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV
        FESELK EPE     + +  TS  +EEK+    S+ KE+V
Subjt:  FESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV

Q9XFJ8 Sec-independent protein translocase protein TATA, chloroplastic2.1e-2152.27Show/hide
Query:  SSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE
        SS++S F         + GD +  +     R R+        L C  LFGLGVPEL VIAGVAALVFGPK+LPE+G+SIGKTVKSFQQAAKEFE+ELKKE
Subjt:  SSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE

Query:  P-ESIGETAVEKPTSVDDEEKQDLKVSNQKES
        P E   +     PT+V   E++ L+ S+ KES
Subjt:  P-ESIGETAVEKPTSVDDEEKQDLKVSNQKES

Q9XH46 Sec-independent protein translocase protein TATA, chloroplastic5.6e-2756.77Show/hide
Query:  VTLSFTSS--IP-RLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGK
        +TLS +SS  IP RLP+         SS ++N     SF   + + SSLL      KT  R  KG TCNA FGLGVPELVVIAGVAALVFGPKKLPEVG+
Subjt:  VTLSFTSS--IP-RLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGK

Query:  SIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV
        SIG+TVKSFQQAAKEFE+ELKKEP    E +V       ++EKQ++KVS+ K++V
Subjt:  SIGKTVKSFQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV

Arabidopsis top hitse value%identityAlignment
AT5G28750.1 Bacterial sec-independent translocation protein mttA/Hcf1061.2e-2757.86Show/hide
Query:  PSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKE
        P   P  SSS+SSFF+N  T  +      S  ++ R  R   T     K LTCNALFGLGVPEL VIAGVAAL+FGPKKLPE+GKSIGKTVKSFQQAAKE
Subjt:  PSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKE

Query:  FESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV
        FESELK EPE     + +  TS  +EEK+    S+ KE+V
Subjt:  FESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV

AT5G52440.1 Bacterial sec-independent translocation protein mttA/Hcf1063.0e-0745.9Show/hide
Query:  ALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSF-------QQAAKEFESELKKE
        +LFG+G PE +VI  VA LVFGPK L EV +++GKT+++F       Q  +++F+S L++E
Subjt:  ALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSF-------QQAAKEFESELKKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAATCTCATCTGTAACTTTATCCTTCACATCTTCCATTCCCAGGCTTCCATCGTTTTCCCCTCCGTTTTCCTCCTCCAAATCATCCTTCTTCGCCAACAATGTCAC
CGCCAATTCCTTCAACAAAGGCGACCATAGCCATTCTTCGCTATTGCGAACCACCAGGTCCAGAAAGACGATGGATAGAGCTCATAAGGGTCTCACTTGTAACGCTCTGT
TTGGACTTGGAGTGCCTGAGCTTGTTGTAATTGCCGGCGTCGCCGCTCTGGTTTTTGGCCCCAAGAAGTTGCCTGAAGTCGGGAAGAGTATTGGAAAAACGGTCAAGAGC
TTCCAACAGGCGGCTAAGGAGTTCGAGTCCGAGCTGAAGAAAGAGCCCGAGTCAATCGGAGAGACCGCAGTAGAAAAGCCTACATCAGTAGATGATGAGGAGAAGCAAGA
TTTGAAGGTATCAAACCAAAAGGAGAGTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAATCTCATCTGTAACTTTATCCTTCACATCTTCCATTCCCAGGCTTCCATCGTTTTCCCCTCCGTTTTCCTCCTCCAAATCATCCTTCTTCGCCAACAATGTCAC
CGCCAATTCCTTCAACAAAGGCGACCATAGCCATTCTTCGCTATTGCGAACCACCAGGTCCAGAAAGACGATGGATAGAGCTCATAAGGGTCTCACTTGTAACGCTCTGT
TTGGACTTGGAGTGCCTGAGCTTGTTGTAATTGCCGGCGTCGCCGCTCTGGTTTTTGGCCCCAAGAAGTTGCCTGAAGTCGGGAAGAGTATTGGAAAAACGGTCAAGAGC
TTCCAACAGGCGGCTAAGGAGTTCGAGTCCGAGCTGAAGAAAGAGCCCGAGTCAATCGGAGAGACCGCAGTAGAAAAGCCTACATCAGTAGATGATGAGGAGAAGCAAGA
TTTGAAGGTATCAAACCAAAAGGAGAGTGTATGA
Protein sequenceShow/hide protein sequence
MVISSVTLSFTSSIPRLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKTMDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKS
FQQAAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV