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Carg16519 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16519
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionF-box domain-containing protein
Genome locationCarg_Chr14:13286268..13290277
RNA-Seq ExpressionCarg16519
SyntenyCarg16519
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582437.1 hypothetical protein SDJN03_22439, partial [Cucurbita argyrosperma subsp. sororia]5.4e-11585.71Show/hide
Query:  MAQSDFLRPPMKARKKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK--------------
        MAQSDFLRPPMKARKKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK              
Subjt:  MAQSDFLRPPMKARKKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK--------------

Query:  ---------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE
                             TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE
Subjt:  ---------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE

Query:  HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
        HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
Subjt:  HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL

KAG7018833.1 hypothetical protein SDJN02_20706 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-120100Show/hide
Query:  MAQSDFLRPPMKARKKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSKTRIMREDLCAHAWQ
        MAQSDFLRPPMKARKKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSKTRIMREDLCAHAWQ
Subjt:  MAQSDFLRPPMKARKKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSKTRIMREDLCAHAWQ

Query:  FHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIAD
        FHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIAD
Subjt:  FHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIAD

Query:  ADKDSGTGPL
        ADKDSGTGPL
Subjt:  ADKDSGTGPL

XP_022924581.1 uncharacterized protein LOC111432022 [Cucurbita moschata]3.0e-11385.31Show/hide
Query:  MAQSDFLRPPMKARKKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK--------------
        MAQSDFLRPPMKAR KKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK              
Subjt:  MAQSDFLRPPMKARKKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK--------------

Query:  ---------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE
                             TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE
Subjt:  ---------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE

Query:  HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
        HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
Subjt:  HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL

XP_022980380.1 uncharacterized protein LOC111479766 [Cucurbita maxima]6.2e-11183.67Show/hide
Query:  MAQSDFLRPPMKARKKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK--------------
        MAQSDFLRPPMKAR  KKKKRES SDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLW+SK              
Subjt:  MAQSDFLRPPMKARKKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK--------------

Query:  ---------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE
                             TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGE+RE
Subjt:  ---------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE

Query:  HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
        HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
Subjt:  HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL

XP_023526828.1 uncharacterized protein LOC111790211 [Cucurbita pepo subsp. pepo]3.4e-10982.45Show/hide
Query:  MAQSDFLRPPMKARKKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK--------------
        MAQSDFLRPP KAR  KKKKRESV DEQGQ+NG RNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLW+SK              
Subjt:  MAQSDFLRPPMKARKKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK--------------

Query:  ---------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE
                             TRIMREDLCAHAWQFHFNKEAP+YWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE
Subjt:  ---------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE

Query:  HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
        HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
Subjt:  HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL

TrEMBL top hitse value%identityAlignment
A0A1S3AW05 uncharacterized protein LOC103483521 isoform X21.5e-10284.93Show/hide
Query:  MAQSDFL--------RPPMKARKKKKKKRESVSDEQGQQN-GTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSKTRIMR
        MAQSDFL        R   K +KKKKKKRE+VSDE+GQQN  T N +LQDPFEVLG DLLM ILSY+DARSVALSLLVSRSWYAVASSDRLW+SKTRIMR
Subjt:  MAQSDFL--------RPPMKARKKKKKKRESVSDEQGQQN-GTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSKTRIMR

Query:  EDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNH
        EDLC HAWQFHFNKEAP+YWR+LDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHE CFSTVTSF+GDGEIREHYVRINRWPRMFVSRNEDWSW+MSNH
Subjt:  EDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNH

Query:  FTSYSSIADADKDSGTGPL
        FTSYSSIAD DK  GTGPL
Subjt:  FTSYSSIADADKDSGTGPL

A0A1S3AWZ4 uncharacterized protein LOC103483521 isoform X13.2e-9773.23Show/hide
Query:  MAQSDFL--------RPPMKARKKKKKKRESVSDEQGQQN-GTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK-----
        MAQSDFL        R   K +KKKKKKRE+VSDE+GQQN  T N +LQDPFEVLG DLLM ILSY+DARSVALSLLVSRSWYAVASSDRLW+SK     
Subjt:  MAQSDFL--------RPPMKARKKKKKKRESVSDEQGQQN-GTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK-----

Query:  ------------------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTS
                                      TRIMREDLC HAWQFHFNKEAP+YWR+LDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHE CFSTVTS
Subjt:  ------------------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTS

Query:  FIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
        F+GDGEIREHYVRINRWPRMFVSRNEDWSW+MSNHFTSYSSIAD DK  GTGPL
Subjt:  FIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL

A0A5D3D180 F-box family protein2.7e-9673.02Show/hide
Query:  MAQSDFL------RPPMKARKKKKKKRESVSDEQGQQN-GTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK-------
        MAQSDFL      +   K +KKKKKKRE+VSDE+GQQN  T N +LQDPFEVLG DLLM ILSY+DARSVALSLLVSRSWYAVASSDRLW+SK       
Subjt:  MAQSDFL------RPPMKARKKKKKKRESVSDEQGQQN-GTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK-------

Query:  ----------------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFI
                                    TRIMREDLC HAWQFHFNKEAP+YWR+LDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHE CFSTVTSF+
Subjt:  ----------------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFI

Query:  GDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
        GDGEIREHYVRINRWPRMFVSRNEDWSW+MSNHFTSY SIAD DK  GTGPL
Subjt:  GDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL

A0A6J1E9U6 uncharacterized protein LOC1114320221.4e-11385.31Show/hide
Query:  MAQSDFLRPPMKARKKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK--------------
        MAQSDFLRPPMKAR KKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK              
Subjt:  MAQSDFLRPPMKARKKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK--------------

Query:  ---------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE
                             TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE
Subjt:  ---------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE

Query:  HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
        HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
Subjt:  HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL

A0A6J1IW44 uncharacterized protein LOC1114797663.0e-11183.67Show/hide
Query:  MAQSDFLRPPMKARKKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK--------------
        MAQSDFLRPPMKAR  KKKKRES SDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLW+SK              
Subjt:  MAQSDFLRPPMKARKKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSK--------------

Query:  ---------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE
                             TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGE+RE
Subjt:  ---------------------TRIMREDLCAHAWQFHFNKEAPIYWRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIRE

Query:  HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
        HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL
Subjt:  HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCAAAGTGACTTCCTCCGGCCGCCGATGAAAGCAAGGAAGAAGAAGAAGAAGAAGCGAGAGAGTGTCTCGGATGAACAAGGGCAACAAAATGGAACCCGTAATGA
ACTTCTCCAAGATCCTTTCGAGGTTTTAGGTCCTGATCTATTAATGACGATACTTAGCTACGTTGATGCACGCAGCGTGGCACTTTCTCTCCTTGTCTCTCGATCTTGGT
ACGCCGTGGCTTCCAGCGATCGCCTATGGAATTCGAAGACTCGCATTATGAGGGAGGATTTATGTGCTCATGCCTGGCAATTTCACTTCAATAAGGAAGCTCCCATATAC
TGGCGGAATCTTGATCCGTATTGGCAAGGCAGCCACCCTCTGATGCGCCGATATTTCCATCCCGATGGGAGCCAAACTGCTGATCCTGATGATAGAGTATGGGGTGGGCA
TGAATGCTGCTTTTCCACGGTTACAAGTTTCATCGGCGATGGGGAGATCAGAGAACACTATGTGAGGATAAACAGATGGCCAAGAATGTTTGTGTCAAGGAACGAAGATT
GGAGCTGGAAGATGTCGAATCATTTCACCTCGTACTCAAGCATAGCCGATGCCGACAAGGATAGCGGGACGGGGCCACTTTAA
mRNA sequenceShow/hide mRNA sequence
TTTTGCAACCGCCATTTCCTTAGCAATGTCGGCCAGATCACAATGCTAATCGCCGATCGCGCCATCCTCTCCAAAACCCTTTTCGCCTCTTGAGCTTTGAATTTATGGCG
CAAAGTGACTTCCTCCGGCCGCCGATGAAAGCAAGGAAGAAGAAGAAGAAGAAGCGAGAGAGTGTCTCGGATGAACAAGGGCAACAAAATGGAACCCGTAATGAACTTCT
CCAAGATCCTTTCGAGGTTTTAGGTCCTGATCTATTAATGACGATACTTAGCTACGTTGATGCACGCAGCGTGGCACTTTCTCTCCTTGTCTCTCGATCTTGGTACGCCG
TGGCTTCCAGCGATCGCCTATGGAATTCGAAGACTCGCATTATGAGGGAGGATTTATGTGCTCATGCCTGGCAATTTCACTTCAATAAGGAAGCTCCCATATACTGGCGG
AATCTTGATCCGTATTGGCAAGGCAGCCACCCTCTGATGCGCCGATATTTCCATCCCGATGGGAGCCAAACTGCTGATCCTGATGATAGAGTATGGGGTGGGCATGAATG
CTGCTTTTCCACGGTTACAAGTTTCATCGGCGATGGGGAGATCAGAGAACACTATGTGAGGATAAACAGATGGCCAAGAATGTTTGTGTCAAGGAACGAAGATTGGAGCT
GGAAGATGTCGAATCATTTCACCTCGTACTCAAGCATAGCCGATGCCGACAAGGATAGCGGGACGGGGCCACTTTAACAGCTGGTGAGAAAATGCTTGTTTGCTCTTTCT
AGTAGAGGCTGTCGCTTTTCTGTTAACAGAATTTTTGGTAGTATGGGAAAGGAATTGGTGTTGGGTTAGGATCACATTTTCTTTTGATCCTCTGCACAGAATTGGGAGTG
GACTTTGGTTTTTTCCTGGGAAAATGTATGTATATGTTTCTTACTAGCAAGCATCAGGATTTGAAATTAATAAGTTAAGTGAATTTGTTTTTCTCAAGTCATATACTTGT
TAATATCACTTGTCATTCAGATATACATTAAACTTTTGGGGCCTATGTTATGTCTGGAACCTTAACTCGTCTTAAATATTAATTTTAGCATTATAGAGGTTTCTTAATAA
GTCATGCCTATATTCATGTATATGTTATATACAATATTCAAGCCATTATTAACACGAGTAGTCAAAAGTTAAAGAGTTCTCCCCTGCCGCTGCTCGTACAGGCGCTTGTA
TATTCCGGCCAACTTGTCGGCGTCCGGCAGGTTATCTCTGATCAGAGCAGCTTTCTTTAAGTTATGGGTCCAAGCGTACAAGCCAGGGAATTCATCGCATGCACAATTCC
TCCGAACTCCAAATCCAGGGTGCCAATCTCCTCTCCGGTGAAGAATTTCTTGTCGCCAAGGCATTGTTCTTAGGAATTCGATCGCCTCTGCCCTAGCTTTCTTCACCGCT
CAATTGGGCCGTGCGGCTGTGCAGCGTGGACGGGCAGAGGTTGGGGATCATAAAGAAGAGGCAAGTCCCTGACATTGATGTATTTGGATTGGTTAAACCCTCCACACTGA
ATAAC
Protein sequenceShow/hide protein sequence
MAQSDFLRPPMKARKKKKKKRESVSDEQGQQNGTRNELLQDPFEVLGPDLLMTILSYVDARSVALSLLVSRSWYAVASSDRLWNSKTRIMREDLCAHAWQFHFNKEAPIY
WRNLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTSFIGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADADKDSGTGPL