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Carg16543 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16543
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAcidic leucine-rich nuclear phosphoprotein 32-related protein 2
Genome locationCarg_Chr14:13171900..13173238
RNA-Seq ExpressionCarg16543
SyntenyCarg16543
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582410.1 hypothetical protein SDJN03_22412, partial [Cucurbita argyrosperma subsp. sororia]3.9e-44100Show/hide
Query:  MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
        MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
Subjt:  MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
XP_004134046.1 uncharacterized protein LOC101205158 [Cucumis sativus]3.3e-3586.02Show/hide
Query:  GDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
        GDS+ VNG  E+++DSAAAGEVGDH NGE+ SESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCSC+IM
Subjt:  GDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
XP_022924268.1 uncharacterized protein LOC111431793 [Cucurbita moschata]3.9e-44100Show/hide
Query:  MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
        MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
Subjt:  MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
XP_022979377.1 uncharacterized protein LOC111479120 [Cucurbita maxima]1.9e-4398.95Show/hide
Query:  MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
        MGGDSRAVNGYDERSVDSAAAGEVGDHRN EDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
Subjt:  MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
XP_038897861.1 uncharacterized protein LOC120085750 [Benincasa hispida]1.5e-3585.26Show/hide
Query:  MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
        M GDS+ VNG  E+ +DSAA GEVGDH NGE+ SESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCSC+IM
Subjt:  MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
TrEMBL top hitse value%identityAlignment
A0A0A0L701 Uncharacterized protein1.6e-3586.02Show/hide
Query:  GDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
        GDS+ VNG  E+++DSAAAGEVGDH NGE+ SESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCSC+IM
Subjt:  GDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
A0A1S3AX40 uncharacterized protein LOC103483558 isoform X21.1e-3385.71Show/hide
Query:  MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCS
        M GDS+ VNG  E+++DSAAAGEVGDH NGE+ SESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCS
Subjt:  MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCS
A0A5A7U1V8 Uncharacterized protein1.1e-3385.71Show/hide
Query:  MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCS
        M GDS+ VNG  E+++DSAAAGEVGDH NGE+ SESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCS
Subjt:  MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCS
A0A6J1EBY1 uncharacterized protein LOC1114317931.9e-44100Show/hide
Query:  MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
        MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
Subjt:  MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
A0A6J1INK9 uncharacterized protein LOC1114791209.3e-4498.95Show/hide
Query:  MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
        MGGDSRAVNGYDERSVDSAAAGEVGDHRN EDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
Subjt:  MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34010.1 unknown protein9.3e-0446.67Show/hide
Query:  RMKVRWNDSNGNNLAEILEFQPSDVSDSGDE----ESDSCSCMIM
        R KV+W D+ G  +AE+ EF+PS+V +S DE       SC C IM
Subjt:  RMKVRWNDSNGNNLAEILEFQPSDVSDSGDE----ESDSCSCMIM
AT2G33390.1 unknown protein1.0e-1847.31Show/hide
Query:  GDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM
        G+ +  NG + +++ S  + E+ D    E++SES  LLPPR+GGMSR ++K +  V+WND  G+NLAE+L ++PS+VSD+ D++SDSC C IM
Subjt:  GDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGGCGATTCTAGGGCTGTTAATGGCTACGATGAGAGGTCTGTGGACTCTGCGGCGGCGGGAGAAGTTGGGGATCATAGAAACGGCGAAGATGACAGTGAATCGAA
TGCTCTATTGCCGCCGCGGCGCGGCGGAATGTCGAGGAAATCGAATAAGCCGAGGATGAAAGTCCGGTGGAATGATAGTAATGGTAATAACCTAGCGGAGATTTTGGAGT
TTCAACCGAGCGACGTGAGCGATTCCGGGGACGAGGAGTCTGATTCTTGCAGCTGTATGATTATGTAG
mRNA sequenceShow/hide mRNA sequence
TGAGATGGTTCGATTTAGAAATCCGAAATCTAGGTCTGTTTTTTGGGGTTGTTTATAGGGCAAATTTCCGATTGGATTTATACTGCGAGTTTCGAGGCTATGGGCGGCGA
TTCTAGGGCTGTTAATGGCTACGATGAGAGGTCTGTGGACTCTGCGGCGGCGGGAGAAGTTGGGGATCATAGAAACGGCGAAGATGACAGTGAATCGAATGCTCTATTGC
CGCCGCGGCGCGGCGGAATGTCGAGGAAATCGAATAAGCCGAGGATGAAAGTCCGGTGGAATGATAGTAATGGTAATAACCTAGCGGAGATTTTGGAGTTTCAACCGAGC
GACGTGAGCGATTCCGGGGACGAGGAGTCTGATTCTTGCAGCTGTATGATTATGTAGATTATTACATCAAATATTAGTGTATGACGACGAGAACAATGTCATTTCTTTAC
AACGAAACTGATAATAATTGGCGATGTTTCTGACTGTATAACGGATTGCTTTTGGTACTACGACGACTGATAGAAGAGTTCAAAGATCGACTGATTAATATGTCGTTTCG
TTACGCCTTGCGGTTTCTGGCGATGTGTCCGAGTTGTTTTTCGAATTTGTAAGATCACCTTCCTGGTGATATGATGTATGGATGATGCTGATATTGACATTATGAAATCA
CAGATTAGTTGAGCCTTTGACAGTGCAGAATGATGTATTATGTAATGCAAACACTTGGAATTCTTCTTCTATATCTATCATTGTTAATGATTCATAGAGCTTCTCGACCT
TTTCTCTGTTGTTTATTGCTCCCGATCTCGAGATTTCGTGAACGTTTTTGTCGCCGTTTTCGTTTTTTCATCACGAATTAGCCGTAATGTTGTAATATAACCA
Protein sequenceShow/hide protein sequence
MGGDSRAVNGYDERSVDSAAAGEVGDHRNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEESDSCSCMIM