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Carg16548 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16548
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEmbryo sac development arrest protein
Genome locationCarg_Chr14:13131518..13131889
RNA-Seq ExpressionCarg16548
SyntenyCarg16548
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN56835.1 hypothetical protein Csa_009887 [Cucumis sativus]4.1e-4678.46Show/hide
Query:  MSFHFHSRGLLPAGPSRKRKE---PAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAA----QWKKSKSEAAPPEILKKEHQIQS
        MSFHFHSRGLL AGPS+KRKE   P+A KA EP VSSNRLLAGYMAYEFLTKGT+ GR+F+P R EA PSAA+    QWKK KS+AAPPEILKKEHQIQS
Subjt:  MSFHFHSRGLLPAGPSRKRKE---PAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAA----QWKKSKSEAAPPEILKKEHQIQS

Query:  YTEVATILKTTGGHIPEIVNPTQLGRWLQK
        Y EVA ILKTTG HI  IVNPTQLGRWLQK
Subjt:  YTEVATILKTTGGHIPEIVNPTQLGRWLQK

XP_022924296.1 uncharacterized protein LOC111431827 [Cucurbita moschata]5.3e-62100Show/hide
Query:  MSFHFHSRGLLPAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATI
        MSFHFHSRGLLPAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATI
Subjt:  MSFHFHSRGLLPAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATI

Query:  LKTTGGHIPEIVNPTQLGRWLQK
        LKTTGGHIPEIVNPTQLGRWLQK
Subjt:  LKTTGGHIPEIVNPTQLGRWLQK

XP_022979583.1 uncharacterized protein LOC111479265 [Cucurbita maxima]1.4e-5996.75Show/hide
Query:  MSFHFHSRGLLPAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATI
        MSFHFH RGLLP GPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPG+AEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATI
Subjt:  MSFHFHSRGLLPAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATI

Query:  LKTTGGHIPEIVNPTQLGRWLQK
        LKTTG HIPEIVNPTQLGRWLQK
Subjt:  LKTTGGHIPEIVNPTQLGRWLQK

XP_023526927.1 uncharacterized protein LOC111790299 [Cucurbita pepo subsp. pepo]4.5e-6199.19Show/hide
Query:  MSFHFHSRGLLPAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATI
        MSFHFHSRGLLPAGPSRKRKEPAALKASEP VSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATI
Subjt:  MSFHFHSRGLLPAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATI

Query:  LKTTGGHIPEIVNPTQLGRWLQK
        LKTTGGHIPEIVNPTQLGRWLQK
Subjt:  LKTTGGHIPEIVNPTQLGRWLQK

XP_023539410.1 uncharacterized protein LOC111800062 [Cucurbita pepo subsp. pepo]2.2e-4478.57Show/hide
Query:  MSFHFHSRGLLPAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIP---SAAAQWKKSKSEAAPPEILKKEHQIQSYTEV
        MSFH HSRGLL AGPSRKRKEP+ALKA E PV+SNRLLAGYMAYEFLTKGTILGR+F+P RAEA P    AAAQ+KK K+EAAPPEI+KKEHQIQSYT+V
Subjt:  MSFHFHSRGLLPAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIP---SAAAQWKKSKSEAAPPEILKKEHQIQSYTEV

Query:  ATILKTTGGHIPEIVNPTQLGRWLQK
        ATILKT    I  IVNPTQL RWL K
Subjt:  ATILKTTGGHIPEIVNPTQLGRWLQK

TrEMBL top hitse value%identityAlignment
A0A0A0L4C1 Uncharacterized protein2.0e-4678.46Show/hide
Query:  MSFHFHSRGLLPAGPSRKRKE---PAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAA----QWKKSKSEAAPPEILKKEHQIQS
        MSFHFHSRGLL AGPS+KRKE   P+A KA EP VSSNRLLAGYMAYEFLTKGT+ GR+F+P R EA PSAA+    QWKK KS+AAPPEILKKEHQIQS
Subjt:  MSFHFHSRGLLPAGPSRKRKE---PAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAA----QWKKSKSEAAPPEILKKEHQIQS

Query:  YTEVATILKTTGGHIPEIVNPTQLGRWLQK
        Y EVA ILKTTG HI  IVNPTQLGRWLQK
Subjt:  YTEVATILKTTGGHIPEIVNPTQLGRWLQK

A0A1S3AWH5 uncharacterized protein LOC1034835712.0e-4376.34Show/hide
Query:  MSFHFHSRGLLPAGPSRKRKEPAA----LKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAA--QWKKSKSEAAPPEILKKEH--QIQ
        MSFHFHSRGLL AGPS+KRKEP+      KA EP V SNRLLAGYMAYEFLTKGT+ GR+F+P R EA PS+AA  QWKK K EAAPPEILKKEH  QIQ
Subjt:  MSFHFHSRGLLPAGPSRKRKEPAA----LKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAA--QWKKSKSEAAPPEILKKEH--QIQ

Query:  SYTEVATILKTTGGHIPEIVNPTQLGRWLQK
        SY EVA ILKTTG HI  IVNPTQLGRWLQK
Subjt:  SYTEVATILKTTGGHIPEIVNPTQLGRWLQK

A0A5A7U1L2 Uncharacterized protein2.0e-4376.34Show/hide
Query:  MSFHFHSRGLLPAGPSRKRKEPAA----LKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAA--QWKKSKSEAAPPEILKKEH--QIQ
        MSFHFHSRGLL AGPS+KRKEP+      KA EP V SNRLLAGYMAYEFLTKGT+ GR+F+P R EA PS+AA  QWKK K EAAPPEILKKEH  QIQ
Subjt:  MSFHFHSRGLLPAGPSRKRKEPAA----LKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAA--QWKKSKSEAAPPEILKKEH--QIQ

Query:  SYTEVATILKTTGGHIPEIVNPTQLGRWLQK
        SY EVA ILKTTG HI  IVNPTQLGRWLQK
Subjt:  SYTEVATILKTTGGHIPEIVNPTQLGRWLQK

A0A6J1E960 uncharacterized protein LOC1114318272.6e-62100Show/hide
Query:  MSFHFHSRGLLPAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATI
        MSFHFHSRGLLPAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATI
Subjt:  MSFHFHSRGLLPAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATI

Query:  LKTTGGHIPEIVNPTQLGRWLQK
        LKTTGGHIPEIVNPTQLGRWLQK
Subjt:  LKTTGGHIPEIVNPTQLGRWLQK

A0A6J1IWN8 uncharacterized protein LOC1114792657.0e-6096.75Show/hide
Query:  MSFHFHSRGLLPAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATI
        MSFHFH RGLLP GPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPG+AEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATI
Subjt:  MSFHFHSRGLLPAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATI

Query:  LKTTGGHIPEIVNPTQLGRWLQK
        LKTTG HIPEIVNPTQLGRWLQK
Subjt:  LKTTGGHIPEIVNPTQLGRWLQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04000.1 unknown protein9.2e-1237.84Show/hide
Query:  PAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATILKTTGGHIPEI
        P  P  K+   A   A+EP  S+  +LAGY+++E+LT+GT+ G ++N  RA+A  S      K      P E  + E + + Y EVA +L++ G  +P I
Subjt:  PAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATILKTTGGHIPEI

Query:  VNPTQLGRWLQ
        VNP QL R+L+
Subjt:  VNPTQLGRWLQ

AT3G23440.1 embryo sac development arrest 64.7e-1645.45Show/hide
Query:  GPSRKRKEPAA-LKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATILKTTGGHIPEIV
        G SRKRK+  + L+ +  P   N LLAGYMA+E+LT GT+LGR+   G AE  P  +    +S+        +KK    QSY+EVA++ KT G H+P +V
Subjt:  GPSRKRKEPAA-LKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATILKTTGGHIPEIV

Query:  NPTQLGRWLQ
        NPTQL +W+Q
Subjt:  NPTQLGRWLQ

AT5G44060.1 unknown protein1.8e-1538.79Show/hide
Query:  SRGLLPAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATILKTTGG
        ++ ++   P   R    A  A   PV SN+LLAGY+A+EFL  GT+ G  +NP +A+A P         K++ +  +I   +H+ + Y EVA IL+  G 
Subjt:  SRGLLPAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATILKTTGG

Query:  HIPEIVNPTQLGRWLQ
        H+P IVNP+QL R+L+
Subjt:  HIPEIVNPTQLGRWLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCCATTTCCACAGCCGTGGGCTGCTACCGGCTGGGCCGTCCAGAAAAAGAAAGGAGCCGGCGGCTCTTAAAGCCAGTGAGCCACCAGTTTCTTCGAATCGGCT
ATTAGCCGGGTACATGGCTTATGAGTTTCTGACAAAAGGGACCATCTTGGGCCGGGAGTTTAACCCGGGTCGAGCCGAAGCAATCCCATCCGCCGCCGCTCAGTGGAAGA
AGTCGAAGTCGGAAGCGGCGCCGCCAGAGATCTTGAAGAAAGAGCATCAGATTCAGAGCTACACTGAGGTGGCGACCATTTTGAAGACTACTGGGGGTCATATACCCGAA
ATCGTGAACCCGACCCAACTGGGTCGGTGGCTTCAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCCATTTCCACAGCCGTGGGCTGCTACCGGCTGGGCCGTCCAGAAAAAGAAAGGAGCCGGCGGCTCTTAAAGCCAGTGAGCCACCAGTTTCTTCGAATCGGCT
ATTAGCCGGGTACATGGCTTATGAGTTTCTGACAAAAGGGACCATCTTGGGCCGGGAGTTTAACCCGGGTCGAGCCGAAGCAATCCCATCCGCCGCCGCTCAGTGGAAGA
AGTCGAAGTCGGAAGCGGCGCCGCCAGAGATCTTGAAGAAAGAGCATCAGATTCAGAGCTACACTGAGGTGGCGACCATTTTGAAGACTACTGGGGGTCATATACCCGAA
ATCGTGAACCCGACCCAACTGGGTCGGTGGCTTCAAAAGTAA
Protein sequenceShow/hide protein sequence
MSFHFHSRGLLPAGPSRKRKEPAALKASEPPVSSNRLLAGYMAYEFLTKGTILGREFNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATILKTTGGHIPE
IVNPTQLGRWLQK