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Carg16570 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16570
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHR-like lesion-inducing protein-related
Genome locationCarg_Chr14:13029700..13032806
RNA-Seq ExpressionCarg16570
SyntenyCarg16570
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008637 - HR-like lesion-inducer


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582373.1 Actin-related protein 9, partial [Cucurbita argyrosperma subsp. sororia]3.2e-56100Show/hide
Query:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF
        FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF
Subjt:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF

Query:  LQHIALFGALIFFLGMKTT
        LQHIALFGALIFFLGMKTT
Subjt:  LQHIALFGALIFFLGMKTT

KAG7018782.1 hypothetical protein SDJN02_20655 [Cucurbita argyrosperma subsp. argyrosperma]5.0e-78100Show/hide
Query:  MHNFCGNHFRLHIHPLFRFNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDF
        MHNFCGNHFRLHIHPLFRFNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDF
Subjt:  MHNFCGNHFRLHIHPLFRFNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDF

Query:  FNYSPQKPIFDILLFSDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
        FNYSPQKPIFDILLFSDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
Subjt:  FNYSPQKPIFDILLFSDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY

XP_022924237.1 uncharacterized protein LOC111431764 [Cucurbita moschata]1.1e-6498.52Show/hide
Query:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF
        FNEFGHNGGPAAAELSLKVA LRRNLSSKLGVAIP+IDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF
Subjt:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF

Query:  LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
        LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
Subjt:  LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY

XP_022979205.1 uncharacterized protein LOC111479010 [Cucurbita maxima]1.9e-6497.78Show/hide
Query:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF
        FNEFGHNGGPA+AEL+LKVA LRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF
Subjt:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF

Query:  LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
        LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
Subjt:  LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY

XP_023526739.1 uncharacterized protein LOC111790139 [Cucurbita pepo subsp. pepo]4.6e-6397.04Show/hide
Query:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF
        FNEFGHNGGPAAAELSLKVA LRRNLSSKLGVAIP+IDVRHLVAISLSLKGIGGLLFVFGSRVGAY LLLQLAIITPVLYDFFNYSPQKP FDILLFSDF
Subjt:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF

Query:  LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
        LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
Subjt:  LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY

TrEMBL top hitse value%identityAlignment
A0A1S3AXB3 uncharacterized protein LOC103483616 isoform X22.4e-4983.09Show/hide
Query:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF
        FNEFG+NGGPAAAELS KVA LRRNLSSKL VAIPDIDVRHLVA+SLSLKGIGGLLFVFGSRVGAYLLLL LAIITPVL+DFFN+S QKP F I L SDF
Subjt:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF

Query:  LQHIALFGALIFFLGMK-TTGPRKHSKKKTSKTKTY
        LQHIALFGAL+FFLGMK TT P+K  KKKT K K +
Subjt:  LQHIALFGALIFFLGMK-TTGPRKHSKKKTSKTKTY

A0A6J1E8C2 uncharacterized protein LOC1114317645.3e-6598.52Show/hide
Query:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF
        FNEFGHNGGPAAAELSLKVA LRRNLSSKLGVAIP+IDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF
Subjt:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF

Query:  LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
        LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
Subjt:  LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY

A0A6J1FRE6 uncharacterized protein LOC1114474921.6e-5083.7Show/hide
Query:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF
        FNEF +NGG AAAELS KVA LRRNLSSKLGVAIPDIDV HLVAISLSLKGIGGLLFVFGS VGAYLLLLQLAIITPVLYDFFN+SPQ P F ILL SDF
Subjt:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF

Query:  LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
        LQHIALFGAL+FFL MK T P++  KKK  KTKTY
Subjt:  LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY

A0A6J1ID53 uncharacterized protein LOC1114740251.4e-4982.96Show/hide
Query:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF
        FNEF +NGG AAA LS KVA LRRNLSSKLGVAIPDIDV HLVAISLSLKGIGGLLFVFGS VGAYLLLLQLAIITPVLYDFFN+S QKP F ILL  DF
Subjt:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF

Query:  LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
        LQHIALFGAL+FFLGMK T P++  KKK  KTKTY
Subjt:  LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY

A0A6J1ISL2 uncharacterized protein LOC1114790109.0e-6597.78Show/hide
Query:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF
        FNEFGHNGGPA+AEL+LKVA LRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF
Subjt:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF

Query:  LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
        LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY
Subjt:  LQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04340.1 HR-like lesion-inducing protein-related1.1e-3050.37Show/hide
Query:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF
        FN+FG +GGPAA EL+ K+   + +LSS LGV++P+++V+ +V   ++LKG+GGLLFV G+  GAYLL + L +++P+LYDF+NY P+   F +LL ++F
Subjt:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF

Query:  LQHIALFGALIFFLGMK--TTGPRKHSKKKTSKTK
        LQ +AL GAL+FF+GMK  TT  ++  KK+T K K
Subjt:  LQHIALFGALIFFLGMK--TTGPRKHSKKKTSKTK

AT3G23180.1 HR-like lesion-inducing protein-related7.2e-0638.6Show/hide
Query:  VRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDIL
        ++HL+ +S+ ++ +GGL+F++GS  GA+LLL+   I T V +DF+N+      F +L
Subjt:  VRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDIL

AT3G23190.1 HR-like lesion-inducing protein-related1.4e-0639.68Show/hide
Query:  LVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILL--FSDFLQ
        +VA+ + +K +GG+LF+F + VGA LLL+  AI++P+LYDF+N    +  F +    F +F++
Subjt:  LVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILL--FSDFLQ

AT4G14420.1 HR-like lesion-inducing protein-related4.3e-2749.26Show/hide
Query:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF
        FN+FG +GG +A  L  K  A   ++++  G  +P +D++ LVA +++LKGIGGLLFVFGS +GAYLLLL  A+ TP+LYDF+NY   +  F   LFS F
Subjt:  FNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDF

Query:  LQHIALFGALIFFLGMKTTGPRKHS---KKKTSKTK
         Q +AL G L+FF+GMK +  RKH    +KK  K K
Subjt:  LQHIALFGALIFFLGMKTTGPRKHS---KKKTSKTK

AT5G43460.1 HR-like lesion-inducing protein-related3.8e-3153.49Show/hide
Query:  HNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDFLQHIA
        ++GGPAA EL+ K+  ++ +LSS+LGV +P I+VR +VA  ++LKG+GGLLFV G+  GAYLL   L +  P+LYDF+NY PQ+  F +LL ++FLQ +A
Subjt:  HNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIFDILLFSDFLQHIA

Query:  LFGALIFFLGMKTTGP-RKHSKKKTSKTK
        LFGAL+FF+GMK + P +K+ KK+T K K
Subjt:  LFGALIFFLGMKTTGP-RKHSKKKTSKTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAATTTTTGTGGAAACCATTTTAGACTTCACATACATCCATTGTTTAGGTTTAATGAGTTCGGCCATAATGGAGGGCCAGCAGCCGCGGAGTTGTCTCTAAAAGT
AGCTGCTTTGAGGAGAAATTTATCATCCAAGCTGGGGGTAGCGATACCTGATATTGATGTCAGACACTTGGTTGCCATTTCTTTATCTCTTAAAGGGATTGGAGGCCTTC
TGTTTGTTTTTGGCAGCAGAGTTGGAGCTTATCTCCTGCTTCTGCAATTGGCTATTATCACTCCGGTTCTGTATGATTTCTTCAACTATAGCCCTCAGAAACCTATTTTC
GATATCCTGTTGTTTAGTGATTTCTTGCAGCACATTGCACTTTTTGGTGCTCTGATTTTCTTCTTAGGGATGAAGACCACAGGTCCAAGGAAGCACTCGAAGAAGAAGAC
ATCTAAAACTAAAACATATTAG
mRNA sequenceShow/hide mRNA sequence
TCGGCTTTGGATACCGGAGTGAGGCTGAATCCGATGCACAATTTTTGTGGAAACCATTTTAGACTTCACATACATCCATTGTTTAGGTTTAATGAGTTCGGCCATAATGG
AGGGCCAGCAGCCGCGGAGTTGTCTCTAAAAGTAGCTGCTTTGAGGAGAAATTTATCATCCAAGCTGGGGGTAGCGATACCTGATATTGATGTCAGACACTTGGTTGCCA
TTTCTTTATCTCTTAAAGGGATTGGAGGCCTTCTGTTTGTTTTTGGCAGCAGAGTTGGAGCTTATCTCCTGCTTCTGCAATTGGCTATTATCACTCCGGTTCTGTATGAT
TTCTTCAACTATAGCCCTCAGAAACCTATTTTCGATATCCTGTTGTTTAGTGATTTCTTGCAGCACATTGCACTTTTTGGTGCTCTGATTTTCTTCTTAGGGATGAAGAC
CACAGGTCCAAGGAAGCACTCGAAGAAGAAGACATCTAAAACTAAAACATATTAGATTTGTTGAAGAAGCAACAGTTTAGCGATTGGATTAATTTGCTCTGCCATTCAGT
TCTTAGGTATACACATAGTTTGGTAGTTTTCTTTTTCTCGAATTACTTTGCTTCATTGTTTGTCTTCTGATGAGTTATTATTCAATTTGAGCTGTGGCATACAGGGCCTT
GTACTTGTGTGCCTGTGCTCGAGAGAAGAGAAGATAAGAAGATGTTATTTTTGATAGACTTTCTTTCATTTTTTAACGAAGAATCGAACCATCAACTTAGTAGTATGGTG
TGAATTGGTTTGAGTCTGAATTCATAGTACTAATCCAGTTAAAAGTCTTCCTAACATTTTTAAAATTTTA
Protein sequenceShow/hide protein sequence
MHNFCGNHFRLHIHPLFRFNEFGHNGGPAAAELSLKVAALRRNLSSKLGVAIPDIDVRHLVAISLSLKGIGGLLFVFGSRVGAYLLLLQLAIITPVLYDFFNYSPQKPIF
DILLFSDFLQHIALFGALIFFLGMKTTGPRKHSKKKTSKTKTY