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Carg16572 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16572
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionactin-related protein 9
Genome locationCarg_Chr14:13025539..13029306
RNA-Seq ExpressionCarg16572
SyntenyCarg16572
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018781.1 Actin-related protein 9, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-90100Show/hide
Query:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQDQVLEDLHAIWDWILIETLHIPHTERSLYSAVLLVSETCDNREMDMGFPRNPSTSDTSGYKLFLIS
        SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQDQVLEDLHAIWDWILIETLHIPHTERSLYSAVLLVSETCDNREMDMGFPRNPSTSDTSGYKLFLIS
Subjt:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQDQVLEDLHAIWDWILIETLHIPHTERSLYSAVLLVSETCDNREMDMGFPRNPSTSDTSGYKLFLIS

Query:  AYTSPFHFLAASCSPSCTAALKTPSSPWCVDSTTPILTAASPLTFIPLRIRSRVAKLEPILDLNSAVK
        AYTSPFHFLAASCSPSCTAALKTPSSPWCVDSTTPILTAASPLTFIPLRIRSRVAKLEPILDLNSAVK
Subjt:  AYTSPFHFLAASCSPSCTAALKTPSSPWCVDSTTPILTAASPLTFIPLRIRSRVAKLEPILDLNSAVK

XP_004134078.2 actin-related protein 9 isoform X1 [Cucumis sativus]2.1e-1330.36Show/hide
Query:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------
        SANIRIGLASQDAPF VPHCIARYTNQVPKRNVQD                                                                 
Subjt:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------QVLEDLHAIWDWILIETLH
                                                                                         QVLEDLHAIWDWILIE LH
Subjt:  ---------------------------------------------------------------------------------QVLEDLHAIWDWILIETLH

Query:  IPHTERSLYSAVLLVSETCDNREM
        IPH+ER+ YSA+L+V ET DNRE+
Subjt:  IPHTERSLYSAVLLVSETCDNREM

XP_008438553.1 PREDICTED: actin-related protein 9 [Cucumis melo]2.8e-1329.91Show/hide
Query:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------
        SANIRIGLASQDAPF VPHCIARYTNQ+PKRNVQD                                                                 
Subjt:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------QVLEDLHAIWDWILIETLH
                                                                                         QVLEDLH IWDWILIE LH
Subjt:  ---------------------------------------------------------------------------------QVLEDLHAIWDWILIETLH

Query:  IPHTERSLYSAVLLVSETCDNREM
        IPH+ER+LYSA+L+V ET DNRE+
Subjt:  IPHTERSLYSAVLLVSETCDNREM

XP_031739409.1 actin-related protein 9 isoform X2 [Cucumis sativus]2.1e-1330.36Show/hide
Query:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------
        SANIRIGLASQDAPF VPHCIARYTNQVPKRNVQD                                                                 
Subjt:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------QVLEDLHAIWDWILIETLH
                                                                                         QVLEDLHAIWDWILIE LH
Subjt:  ---------------------------------------------------------------------------------QVLEDLHAIWDWILIETLH

Query:  IPHTERSLYSAVLLVSETCDNREM
        IPH+ER+ YSA+L+V ET DNRE+
Subjt:  IPHTERSLYSAVLLVSETCDNREM

XP_038877353.1 actin-related protein 9 [Benincasa hispida]2.5e-1431.25Show/hide
Query:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------
        SANIRIGLASQDAPF VPHCIARYTNQVPKRNVQD                                                                 
Subjt:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------QVLEDLHAIWDWILIETLH
                                                                                         QVLEDLHAIWDWILIE LH
Subjt:  ---------------------------------------------------------------------------------QVLEDLHAIWDWILIETLH

Query:  IPHTERSLYSAVLLVSETCDNREM
        IPHTER+LYSA+L+V ET DNRE+
Subjt:  IPHTERSLYSAVLLVSETCDNREM

TrEMBL top hitse value%identityAlignment
A0A0A0L4G5 Uncharacterized protein1.0e-1330.36Show/hide
Query:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------
        SANIRIGLASQDAPF VPHCIARYTNQVPKRNVQD                                                                 
Subjt:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------QVLEDLHAIWDWILIETLH
                                                                                         QVLEDLHAIWDWILIE LH
Subjt:  ---------------------------------------------------------------------------------QVLEDLHAIWDWILIETLH

Query:  IPHTERSLYSAVLLVSETCDNREM
        IPH+ER+ YSA+L+V ET DNRE+
Subjt:  IPHTERSLYSAVLLVSETCDNREM

A0A1S3AWS4 actin-related protein 91.4e-1329.91Show/hide
Query:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------
        SANIRIGLASQDAPF VPHCIARYTNQ+PKRNVQD                                                                 
Subjt:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------QVLEDLHAIWDWILIETLH
                                                                                         QVLEDLH IWDWILIE LH
Subjt:  ---------------------------------------------------------------------------------QVLEDLHAIWDWILIETLH

Query:  IPHTERSLYSAVLLVSETCDNREM
        IPH+ER+LYSA+L+V ET DNRE+
Subjt:  IPHTERSLYSAVLLVSETCDNREM

A0A5A7U087 Actin-related protein 91.4e-1329.91Show/hide
Query:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------
        SANIRIGLASQDAPF VPHCIARYTNQ+PKRNVQD                                                                 
Subjt:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------QVLEDLHAIWDWILIETLH
                                                                                         QVLEDLH IWDWILIE LH
Subjt:  ---------------------------------------------------------------------------------QVLEDLHAIWDWILIETLH

Query:  IPHTERSLYSAVLLVSETCDNREM
        IPH+ER+LYSA+L+V ET DNRE+
Subjt:  IPHTERSLYSAVLLVSETCDNREM

A0A6J1FVZ0 actin-related protein 9 isoform X11.5e-1229.86Show/hide
Query:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------
        SANIRIGLASQDAPF +PHCIARYTNQVPKR+VQD                                                                 
Subjt:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------

Query:  ------------------------------------------------------------------------------QVLEDLHAIWDWILIETLHIPH
                                                                                      QVLEDLHAIWDWILIE LHIP 
Subjt:  ------------------------------------------------------------------------------QVLEDLHAIWDWILIETLHIPH

Query:  TERSLYSAVLLVSETCDNREM
        +ER+LYSA+L+V ET DNRE+
Subjt:  TERSLYSAVLLVSETCDNREM

A0A6J1IBZ5 actin-related protein 91.5e-1229.86Show/hide
Query:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------
        SANIRIGLASQDAPF +PHCIARYTNQVPKR+VQD                                                                 
Subjt:  SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQD-----------------------------------------------------------------

Query:  ------------------------------------------------------------------------------QVLEDLHAIWDWILIETLHIPH
                                                                                      QVLEDLHAIWDWILIE LHIP 
Subjt:  ------------------------------------------------------------------------------QVLEDLHAIWDWILIETLHIPH

Query:  TERSLYSAVLLVSETCDNREM
        +ER+LYSA+L+V ET DNRE+
Subjt:  TERSLYSAVLLVSETCDNREM

SwissProt top hitse value%identityAlignment
A2XQX0 Actin-related protein 94.8e-0862.79Show/hide
Query:  QVLEDLHAIWDWILIETLHIPHTERSLYSAVLLVSETCDNREM
        QVLEDL  IW+WIL E LHI   +R LYSA+L++ ET DNRE+
Subjt:  QVLEDLHAIWDWILIETLHIPHTERSLYSAVLLVSETCDNREM

A2XQX0 Actin-related protein 91.7e-0552.38Show/hide
Query:  SANIRIGLASQDAPFYVPHCIARYTNQ----VPKRNVQDQVL
        S+N+RIG ASQD PF +PHCIAR+  Q     P+ +V+D++L
Subjt:  SANIRIGLASQDAPFYVPHCIARYTNQ----VPKRNVQDQVL

Q0JF03 Actin-related protein 94.8e-0862.79Show/hide
Query:  QVLEDLHAIWDWILIETLHIPHTERSLYSAVLLVSETCDNREM
        QVLEDL  IW+WIL E LHI   +R LYSA+L++ ET DNRE+
Subjt:  QVLEDLHAIWDWILIETLHIPHTERSLYSAVLLVSETCDNREM

Q0JF03 Actin-related protein 91.7e-0552.38Show/hide
Query:  SANIRIGLASQDAPFYVPHCIARYTNQ----VPKRNVQDQVL
        S+N+RIG ASQD PF +PHCIAR+  Q     P+ +V+D++L
Subjt:  SANIRIGLASQDAPFYVPHCIARYTNQ----VPKRNVQDQVL

Q9LSW2 Actin-related protein 92.4e-0744.93Show/hide
Query:  SQDAPFYVPHCIARYTNQVPKRNVQDQVLEDLHAIWDWILIETLHIPHTERSLYSAVLLVSETCDNREM
        S   P+ + H I R    V       +V EDL AI DWIL+E LHI H ER  + AV++V ET D RE+
Subjt:  SQDAPFYVPHCIARYTNQVPKRNVQDQVLEDLHAIWDWILIETLHIPHTERSLYSAVLLVSETCDNREM

Arabidopsis top hitse value%identityAlignment
AT5G43500.1 actin-related protein 91.7e-0844.93Show/hide
Query:  SQDAPFYVPHCIARYTNQVPKRNVQDQVLEDLHAIWDWILIETLHIPHTERSLYSAVLLVSETCDNREM
        S   P+ + H I R    V       +V EDL AI DWIL+E LHI H ER  + AV++V ET D RE+
Subjt:  SQDAPFYVPHCIARYTNQVPKRNVQDQVLEDLHAIWDWILIETLHIPHTERSLYSAVLLVSETCDNREM

AT5G43500.2 actin-related protein 91.7e-0844.93Show/hide
Query:  SQDAPFYVPHCIARYTNQVPKRNVQDQVLEDLHAIWDWILIETLHIPHTERSLYSAVLLVSETCDNREM
        S   P+ + H I R    V       +V EDL AI DWIL+E LHI H ER  + AV++V ET D RE+
Subjt:  SQDAPFYVPHCIARYTNQVPKRNVQDQVLEDLHAIWDWILIETLHIPHTERSLYSAVLLVSETCDNREM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTGCAAATATTAGGATTGGCCTTGCGTCGCAGGATGCTCCTTTTTATGTTCCTCATTGCATTGCTCGTTATACCAATCAAGTGCCCAAAAGAAATGTTCAAGATCAGGT
ACTTGAGGACTTGCATGCTATTTGGGACTGGATTTTGATAGAAACTCTGCATATCCCTCATACTGAAAGAAGCTTGTATTCTGCTGTTCTGTTGGTCTCGGAAACATGTG
ACAACCGAGAAATGGATATGGGCTTCCCCCGTAACCCAAGCACCTCAGACACCTCAGGATACAAACTCTTCCTGATCTCAGCATACACTTCTCCGTTCCACTTTCTTGCC
GCCAGCTGCTCCCCAAGCTGCACTGCAGCGTTGAAGACGCCGTCCTCGCCGTGGTGCGTCGATTCCACAACGCCCATTCTGACCGCCGCTTCACCTCTCACTTTCATCCC
CCTCAGAATCAGGTCGCGCGTAGCCAAACTGGAGCCCATCTTGGACTTAAACAGTGCCGTGAAG
mRNA sequenceShow/hide mRNA sequence
TCTGCAAATATTAGGATTGGCCTTGCGTCGCAGGATGCTCCTTTTTATGTTCCTCATTGCATTGCTCGTTATACCAATCAAGTGCCCAAAAGAAATGTTCAAGATCAGGT
ACTTGAGGACTTGCATGCTATTTGGGACTGGATTTTGATAGAAACTCTGCATATCCCTCATACTGAAAGAAGCTTGTATTCTGCTGTTCTGTTGGTCTCGGAAACATGTG
ACAACCGAGAAATGGATATGGGCTTCCCCCGTAACCCAAGCACCTCAGACACCTCAGGATACAAACTCTTCCTGATCTCAGCATACACTTCTCCGTTCCACTTTCTTGCC
GCCAGCTGCTCCCCAAGCTGCACTGCAGCGTTGAAGACGCCGTCCTCGCCGTGGTGCGTCGATTCCACAACGCCCATTCTGACCGCCGCTTCACCTCTCACTTTCATCCC
CCTCAGAATCAGGTCGCGCGTAGCCAAACTGGAGCCCATCTTGGACTTAAACAGTGCCGTGAAG
Protein sequenceShow/hide protein sequence
SANIRIGLASQDAPFYVPHCIARYTNQVPKRNVQDQVLEDLHAIWDWILIETLHIPHTERSLYSAVLLVSETCDNREMDMGFPRNPSTSDTSGYKLFLISAYTSPFHFLA
ASCSPSCTAALKTPSSPWCVDSTTPILTAASPLTFIPLRIRSRVAKLEPILDLNSAVK