; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16575 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16575
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionC2H2-type domain-containing protein
Genome locationCarg_Chr14:13006239..13006763
RNA-Seq ExpressionCarg16575
SyntenyCarg16575
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582366.1 Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. sororia]8.0e-9699.43Show/hide
Query:  MDFGKQGSSDSSSDEYDPPPPQQ-HHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQ
        MDFGKQGSSDSSSDEYDPPPPQQ HHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQ
Subjt:  MDFGKQGSSDSSSDEYDPPPPQQ-HHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQ

Query:  PNIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
        PNIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
Subjt:  PNIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

KAG7018777.1 Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-97100Show/hide
Query:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQP
        MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQP
Subjt:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQP

Query:  NIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
        NIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
Subjt:  NIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

XP_022924669.1 transcriptional regulator SUPERMAN-like [Cucurbita moschata]1.3e-9095.98Show/hide
Query:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQP
        MDFGKQG+SDSSSDEYDPPPPQQ   HHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTH SSSSSPHSNDQLFPPLSTQP
Subjt:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQP

Query:  NIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
        N PYYPPPPQPPSSYRMYFDT+ATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
Subjt:  NIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

XP_022979419.1 zinc finger protein 11-like [Cucurbita maxima]6.1e-8894.83Show/hide
Query:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQP
        MDFGKQGSSDSSSDEYDPPPPQQHH HHH  H TDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTH SSSSSPHSNDQLFPPLSTQP
Subjt:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQP

Query:  NIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
        NIPYYPPPPQP SSYRMYFDTAATNFPIHPQIRSPGV NQEL GA+LSLQIDQTRGVWENEEVDLELRLGHEYR
Subjt:  NIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

XP_023526746.1 transcriptional regulator SUPERMAN-like [Cucurbita pepo subsp. pepo]1.2e-8893.79Show/hide
Query:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHP---TDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLS
        MDFGKQG+SDSSSDEYDPPPP   HHHHHHHHP    DNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTH SSSSSPHSNDQLFPPLS
Subjt:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHP---TDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLS

Query:  TQPNIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
        TQPNIPY PPPPQPPSSYRMYFDTAATNFPIHPQIRSPGV NQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
Subjt:  TQPNIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

TrEMBL top hitse value%identityAlignment
A0A0A0L4H6 C2H2-type domain-containing protein7.9e-4973.89Show/hide
Query:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSN-DQLFPP-LST
        MDFGKQGS DSSSDEY     +   H H      +NDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK KHRNF HSSSS+  HSN DQ FPP + T
Subjt:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSN-DQLFPP-LST

Query:  QPNIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTR
        QP  P Y   P PP SYRMYFDTAATNFPIHPQI SP V NQELLGA+LSL+IDQTR
Subjt:  QPNIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTR

A0A1S3AZA2 zinc finger protein 76.2e-6277.27Show/hide
Query:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSN-DQLFPP-LST
        MDFGKQGS DSSSDEY+P    Q HH H      +NDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK KHRNF HSSSS+  HSN DQ FPP + T
Subjt:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSN-DQLFPP-LST

Query:  QPNIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
        QP  P Y   P PP SYRMYFDTAATNFPIHPQI SP V NQELLGA+LSLQIDQ RGVW NEE+DLELRLGHEYR
Subjt:  QPNIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

A0A6J1DD81 zinc finger protein 8-like6.4e-5167.6Show/hide
Query:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTD--NDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLST
        MDFGKQGS DSSSDEY P              P D  +DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK K RN   SSSS   HS+DQ+FPP+S 
Subjt:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTD--NDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLST

Query:  QPNIPYYPPPPQPPS--SYRMYFD-TAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
         P   YYPPPP   +  +YRMYFD TAA N+PIH + RS G  N++LLGA+L+LQIDQTRGVW+NEE+DLELRLGHEYR
Subjt:  QPNIPYYPPPPQPPS--SYRMYFD-TAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

A0A6J1E9V2 transcriptional regulator SUPERMAN-like6.4e-9195.98Show/hide
Query:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQP
        MDFGKQG+SDSSSDEYDPPPPQQ   HHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTH SSSSSPHSNDQLFPPLSTQP
Subjt:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQP

Query:  NIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
        N PYYPPPPQPPSSYRMYFDT+ATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
Subjt:  NIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

A0A6J1IWL0 zinc finger protein 11-like3.0e-8894.83Show/hide
Query:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQP
        MDFGKQGSSDSSSDEYDPPPPQQHH HHH  H TDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTH SSSSSPHSNDQLFPPLSTQP
Subjt:  MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQP

Query:  NIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR
        NIPYYPPPPQP SSYRMYFDTAATNFPIHPQIRSPGV NQEL GA+LSLQIDQTRGVWENEEVDLELRLGHEYR
Subjt:  NIPYYPPPPQPPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 109.4e-0737.5Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQPNIPYYPPPP--QPPSSYRMYFDTAATNF
        R Y C+FC+R F +AQALGGHMN+HR+DRA+ K  +            +  LFP  S+ P  P +         S Y + F+T    F
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQPNIPYYPPPP--QPPSSYRMYFDTAATNF

Q38895 Transcriptional regulator SUPERMAN1.2e-0642.68Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSP--HSNDQLFPPLSTQPNIPYYP----PPPQPPSSYR
        R Y C+FCKR F +AQALGGHMN+HR+DRA+ + +    SSS+ SP   + +  +  ++  P   + P    P   PPSS R
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSP--HSNDQLFPPLSTQPNIPYYP----PPPQPPSSYR

Q9LHS9 Probable transcriptional regulator RABBIT EARS6.5e-0854.55Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPP
        R Y C+FC R F +AQALGGHMN+HR+DRA+ K +       S SP S DQ  PP
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPP

Q9SLB8 Zinc finger protein 117.2e-0746.58Show/hide
Query:  YECTFCKRGFTNAQALGGHMNIHRKDRAK----------PKHR------NFTHSSSSSSPHSNDQLFPPLSTQ
        Y C+FC+R F +AQALGGHMN+HR+DRAK          P H       N   SSSSSS  +   L P L+ Q
Subjt:  YECTFCKRGFTNAQALGGHMNIHRKDRAK----------PKHR------NFTHSSSSSSPHSNDQLFPPLSTQ

Q9SR34 Transcriptional regulator TAC12.5e-0758.7Show/hide
Query:  HHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHR
        H    D+    R Y C+FC RGF+NAQALGGHMNIHR+DRAK + +
Subjt:  HHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHR

Arabidopsis top hitse value%identityAlignment
AT3G09290.1 telomerase activator11.8e-0858.7Show/hide
Query:  HHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHR
        H    D+    R Y C+FC RGF+NAQALGGHMNIHR+DRAK + +
Subjt:  HHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHR

AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein6.0e-0938.46Show/hide
Query:  KRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQPNI--------PYYP----------PPPQPPSSYRMYFDT
        +R Y+C  CKRGFTN QALGGH NIHR++R +       + SSSSS HS     P  S  P+         PY+P           PP  PS    YF +
Subjt:  KRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQPNI--------PYYP----------PPPQPPSSYRMYFDT

Query:  AATN
        ++++
Subjt:  AATN

AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein8.4e-1164.44Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSS
        RPY C FC+RGF+NAQALGGHMNIHRKDRAK +  N     S  +
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSS

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein4.6e-0954.55Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPP
        R Y C+FC R F +AQALGGHMN+HR+DRA+ K +       S SP S DQ  PP
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPP

AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein1.7e-1190.32Show/hide
Query:  TKRPYECTFCKRGFTNAQALGGHMNIHRKDR
        T+R YECTFCKRGFTNAQALGGHMNIHR+DR
Subjt:  TKRPYECTFCKRGFTNAQALGGHMNIHRKDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTGGAAAACAGGGGAGCTCCGACAGTTCCAGCGACGAATATGACCCCCCGCCGCCACAACAACATCACCATCACCATCATCATCATCATCCCACCGATAATGA
CCCCACTAAACGCCCCTACGAGTGCACATTTTGTAAGCGTGGCTTCACCAATGCTCAAGCCCTCGGTGGCCACATGAACATCCACCGCAAGGACCGTGCCAAACCCAAAC
ACCGCAACTTCACTCATTCCTCTTCTTCTTCTTCTCCTCATTCCAACGACCAATTATTCCCTCCTCTTTCCACCCAGCCCAACATCCCCTATTACCCCCCGCCGCCGCAG
CCGCCGTCGTCTTACCGGATGTACTTCGACACCGCCGCCACTAACTTCCCTATTCACCCCCAGATCAGATCGCCCGGCGTCGGCAATCAAGAGCTTCTCGGAGCCGATCT
CAGCCTCCAAATTGATCAAACCAGGGGTGTCTGGGAAAATGAAGAAGTCGATTTGGAGCTTCGACTCGGGCATGAATATCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTGGAAAACAGGGGAGCTCCGACAGTTCCAGCGACGAATATGACCCCCCGCCGCCACAACAACATCACCATCACCATCATCATCATCATCCCACCGATAATGA
CCCCACTAAACGCCCCTACGAGTGCACATTTTGTAAGCGTGGCTTCACCAATGCTCAAGCCCTCGGTGGCCACATGAACATCCACCGCAAGGACCGTGCCAAACCCAAAC
ACCGCAACTTCACTCATTCCTCTTCTTCTTCTTCTCCTCATTCCAACGACCAATTATTCCCTCCTCTTTCCACCCAGCCCAACATCCCCTATTACCCCCCGCCGCCGCAG
CCGCCGTCGTCTTACCGGATGTACTTCGACACCGCCGCCACTAACTTCCCTATTCACCCCCAGATCAGATCGCCCGGCGTCGGCAATCAAGAGCTTCTCGGAGCCGATCT
CAGCCTCCAAATTGATCAAACCAGGGGTGTCTGGGAAAATGAAGAAGTCGATTTGGAGCTTCGACTCGGGCATGAATATCGCTGA
Protein sequenceShow/hide protein sequence
MDFGKQGSSDSSSDEYDPPPPQQHHHHHHHHHPTDNDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKPKHRNFTHSSSSSSPHSNDQLFPPLSTQPNIPYYPPPPQ
PPSSYRMYFDTAATNFPIHPQIRSPGVGNQELLGADLSLQIDQTRGVWENEEVDLELRLGHEYR