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Carg16580 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16580
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:12986542..12987622
RNA-Seq ExpressionCarg16580
SyntenyCarg16580
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049291.1 putative transmembrane protein [Cucumis melo var. makuwa]2.3e-2479.73Show/hide
Query:  LHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH
        L PN+AGRTLHE P MVRR E  L LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCP K RHY    STRRPS H
Subjt:  LHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH

KAG6582361.1 hypothetical protein SDJN03_22363, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2993.24Show/hide
Query:  LPCLDLLHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHST
        LP L +LHPNIAGRTLHENPSMVRRTE  LKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHST
Subjt:  LPCLDLLHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHST

KAG7018772.1 hypothetical protein SDJN02_20645, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-43100Show/hide
Query:  MDGIWLPCLDLLHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH
        MDGIWLPCLDLLHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH
Subjt:  MDGIWLPCLDLLHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH

KGN56901.1 hypothetical protein Csa_009866 [Cucumis sativus]1.6e-2581.08Show/hide
Query:  LHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH
        L PN+AGRTLHE P MVRR E  L LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCP K RHY  NHST+RPS H
Subjt:  LHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH

TYK17267.1 putative transmembrane protein [Cucumis melo var. makuwa]2.3e-2479.73Show/hide
Query:  LHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH
        L PN+AGRTLHE P MVRR E  L LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCP K RHY    STRRPS H
Subjt:  LHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH

TrEMBL top hitse value%identityAlignment
A0A0A0LA00 Uncharacterized protein7.8e-2681.08Show/hide
Query:  LHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH
        L PN+AGRTLHE P MVRR E  L LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCP K RHY  NHST+RPS H
Subjt:  LHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH

A0A5A7U6N3 Putative transmembrane protein1.1e-2479.73Show/hide
Query:  LHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH
        L PN+AGRTLHE P MVRR E  L LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCP K RHY    STRRPS H
Subjt:  LHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH

A0A5D3CZY7 Putative transmembrane protein1.1e-2479.73Show/hide
Query:  LHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH
        L PN+AGRTLHE P MVRR E  L LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCP K RHY    STRRPS H
Subjt:  LHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH

A0A7N2LY56 Uncharacterized protein5.6e-0853.33Show/hide
Query:  AGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTIN
        A R L++   ++R+     ++ LQSLQR  V PSGPSGCT+IPGTNGPGCP    HY  N
Subjt:  AGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTIN

W9QW23 Uncharacterized protein9.6e-0850Show/hide
Query:  AGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRP
        A R L+++   + + E KL L  QSL R  VPPSGPSGCT+IPG+ GP CP   +HY  +H+T  P
Subjt:  AGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAATTTGGCTTCCCTGCCTAGACTTGCTTCACCCAAACATAGCTGGTAGAACTCTGCATGAGAACCCATCAATGGTGAGAAGAACGGAGCTGAAGCTGAAGCT
GAAGCTGCAGTCTCTTCAAAGGGTCAGTGTACCGCCCTCCGGCCCCTCTGGTTGCACCTTCATTCCCGGCACCAACGGCCCCGGCTGTCCCCAGAAAGTGAGGCACTACA
CCATCAACCATTCGACTCGACGTCCAAGCGCTCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGAATTTGGCTTCCCTGCCTAGACTTGCTTCACCCAAACATAGCTGGTAGAACTCTGCATGAGAACCCATCAATGGTGAGAAGAACGGAGCTGAAGCTGAAGCT
GAAGCTGCAGTCTCTTCAAAGGGTCAGTGTACCGCCCTCCGGCCCCTCTGGTTGCACCTTCATTCCCGGCACCAACGGCCCCGGCTGTCCCCAGAAAGTGAGGCACTACA
CCATCAACCATTCGACTCGACGTCCAAGCGCTCACTGA
Protein sequenceShow/hide protein sequence
MDGIWLPCLDLLHPNIAGRTLHENPSMVRRTELKLKLKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPQKVRHYTINHSTRRPSAH