; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16583 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16583
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAlba domain-containing protein
Genome locationCarg_Chr14:12979943..12981319
RNA-Seq ExpressionCarg16583
SyntenyCarg16583
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582358.1 hypothetical protein SDJN03_22360, partial [Cucurbita argyrosperma subsp. sororia]9.7e-6697.28Show/hide
Query:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN
        MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVK+PFFYYYNLSKRYIKQYNEVELSALGM   IPTVVTIAEILKKN
Subjt:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN

Query:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT
        GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT
Subjt:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATT

KAG7018769.1 hypothetical protein SDJN02_20642 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-71100Show/hide
Query:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN
        MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN
Subjt:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN

Query:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS
        GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS
Subjt:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS

XP_022924600.1 uncharacterized protein At2g34160-like [Cucurbita moschata]8.0e-6897.35Show/hide
Query:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN
        MESGMVVSEAISE+KNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGM   IPTVVTIAEILKKN
Subjt:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN

Query:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS
        GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS
Subjt:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS

XP_022980835.1 uncharacterized protein At2g34160-like [Cucurbita maxima]1.5e-6696.69Show/hide
Query:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN
        MESGMVVSEA SEVKNEIRNEEEKLLVVAPD EVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGM   IPTVVTIAEILKKN
Subjt:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN

Query:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS
        GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS
Subjt:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS

XP_038877187.1 uncharacterized protein At2g34160-like [Benincasa hispida]1.4e-5988.08Show/hide
Query:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN
        MESGMVVSE   EVKNEIR+EEEKLLVVA DGEVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGM   IPTVVTIAEILK+N
Subjt:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN

Query:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS
        GLAFQK LTISSVSLK GEND+LVMKPKIEIAL+NAEK+K ISTA TSEDS
Subjt:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS

TrEMBL top hitse value%identityAlignment
A0A0A0L8F8 Alba domain-containing protein2.5e-5986.75Show/hide
Query:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN
        M+SGMVVSEA  EVKNEIRNEEE+LLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGM   IPTVVTIAEILK+N
Subjt:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN

Query:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS
        GLAFQK L ISSVSLKNGEN +LVMKPKIEIAL+NAEK+K ISTA TSEDS
Subjt:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS

A0A1S3AXD3 uncharacterized protein At2g34160-like3.3e-5986.75Show/hide
Query:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN
        M+SG VVSEA  EVKNEI+NEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGM   IPTVVTIAEILK+N
Subjt:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN

Query:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS
        GLAFQK LTISSVSLKNGEN +LVMKPKIEIAL+NAEK+K ISTA TSEDS
Subjt:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS

A0A5D3CZ81 Alba DNA/RNA-binding protein3.3e-5986.75Show/hide
Query:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN
        M+SG VVSEA  EVKNEI+NEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGM   IPTVVTIAEILK+N
Subjt:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN

Query:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS
        GLAFQK LTISSVSLKNGEN +LVMKPKIEIAL+NAEK+K ISTA TSEDS
Subjt:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS

A0A6J1EFH1 uncharacterized protein At2g34160-like3.9e-6897.35Show/hide
Query:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN
        MESGMVVSEAISE+KNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGM   IPTVVTIAEILKKN
Subjt:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN

Query:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS
        GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS
Subjt:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS

A0A6J1IXN8 uncharacterized protein At2g34160-like7.3e-6796.69Show/hide
Query:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN
        MESGMVVSEA SEVKNEIRNEEEKLLVVAPD EVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGM   IPTVVTIAEILKKN
Subjt:  MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKN

Query:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS
        GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS
Subjt:  GLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341604.0e-2253.33Show/hide
Query:  KKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKIST
        +K+N+IQVSN KKP F+Y NL+KRY++QYN+VELSALGM   I TVVT+ EILK NG A +K +  S+V +K+    R V K KIEI L+ +EK  ++  
Subjt:  KKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKIST

Query:  ATTSE
        A   E
Subjt:  ATTSE

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein1.1e-2253.33Show/hide
Query:  KKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKIST
        +K+N+IQVSN KKP F+Y NL+KRY++QY +VELSALGM   I TVVT+AEILK NG A +K +  S+V +K+    R V K KIEI L  +EK  ++  
Subjt:  KKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKIST

Query:  ATTSE
        A   E
Subjt:  ATTSE

AT2G34160.1 Alba DNA/RNA-binding protein2.9e-2353.33Show/hide
Query:  KKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKIST
        +K+N+IQVSN KKP F+Y NL+KRY++QYN+VELSALGM   I TVVT+ EILK NG A +K +  S+V +K+    R V K KIEI L+ +EK  ++  
Subjt:  KKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKIST

Query:  ATTSE
        A   E
Subjt:  ATTSE

AT3G04620.1 Alba DNA/RNA-binding protein1.9e-2249.21Show/hide
Query:  EKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDR
        E+ +V+AP        V T    K+N+IQVSN KKP F+Y NL+KRYI+Q+NEVELSALGM  T  TVVTI+EILK NGLA +K +  S+V +K+    +
Subjt:  EKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDR

Query:  LVMKPKIEIALINAEKMKKISTATTS
        +V K KIEI L  ++K   +    T+
Subjt:  LVMKPKIEIALINAEKMKKISTATTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCCGGCATGGTCGTCTCAGAAGCCATCTCTGAGGTCAAGAATGAAATCCGTAATGAGGAGGAAAAGCTCCTGGTCGTTGCTCCAGATGGTGAGGTTAAGGAGAT
CGCTGTTTTGACCGAGATCAAGAAGAAGAGGAACCAAATCCAGGTTTCCAATGTCAAGAAGCCGTTCTTCTACTACTACAATCTTTCTAAGAGGTACATTAAGCAGTACA
ACGAAGTTGAGCTCTCTGCCCTAGGAATGGGTACAACTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAAGAATGGATTAGCATTTCAAAAGTATTTGACGATA
TCTTCTGTAAGCTTGAAGAATGGGGAAAATGATAGGCTGGTTATGAAACCTAAGATTGAGATTGCCCTGATAAATGCAGAAAAGATGAAGAAAATTTCGACTGCTACAAC
AAGTGAAGATTCCTGA
mRNA sequenceShow/hide mRNA sequence
AATTATTTTATTCCTGAAAATTTTCATAGGCTTCATATCTTCGGGGGCGGACCAGTCACCGGAAAATGCTGTAACTGCCAGTATACGGCTGCTAAAACGAAACCGTTGAT
ATCTTAACCGCCCAAACGCCTCCGTCGAAACAAACAGGGATTCTCCAATTTCCGATTATAAATTACTCCCGCAGTTGGATTCGATTTTACCGAAGTTCAGAATTAGTAGT
AGAATCTTTTCCTTCCTTCTGCACAGTACTCTTTTAGCGATAATGGAGTCCGGCATGGTCGTCTCAGAAGCCATCTCTGAGGTCAAGAATGAAATCCGTAATGAGGAGGA
AAAGCTCCTGGTCGTTGCTCCAGATGGTGAGGTTAAGGAGATCGCTGTTTTGACCGAGATCAAGAAGAAGAGGAACCAAATCCAGGTTTCCAATGTCAAGAAGCCGTTCT
TCTACTACTACAATCTTTCTAAGAGGTACATTAAGCAGTACAACGAAGTTGAGCTCTCTGCCCTAGGAATGGGTACAACTATACCTACTGTAGTGACGATCGCCGAGATT
CTGAAGAAGAATGGATTAGCATTTCAAAAGTATTTGACGATATCTTCTGTAAGCTTGAAGAATGGGGAAAATGATAGGCTGGTTATGAAACCTAAGATTGAGATTGCCCT
GATAAATGCAGAAAAGATGAAGAAAATTTCGACTGCTACAACAAGTGAAGATTCCTGATATGAGTTTTGTTAGTGTAGTATCATCTCGGATGTGGCTTTTCTTCTTGTTT
AGCCTACTTTGTCCATAGTTTCTACAGGAGATTGGAGATTTGGTAGCGAATAGGCGAGTGAATGGCACGGCTTTTGGTCGAAGTAGATTCAATCCTAACAGAACTGAAGG
AGAAGAGTCCATTGTTAAAGATTGGATGTAGAGCAGCTTTCTTTGTAATTCAACTACCAAATTCTAATTGCATATAAAATTGAATGAACAGACTGATTCATTTTCTCTTT
CTCTTGCACTACT
Protein sequenceShow/hide protein sequence
MESGMVVSEAISEVKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMGTTIPTVVTIAEILKKNGLAFQKYLTI
SSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSEDS