; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16589 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16589
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDNA-directed RNA polymerase V subunit 7-like
Genome locationCarg_Chr14:12944122..12946884
RNA-Seq ExpressionCarg16589
SyntenyCarg16589
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR004895 - Prenylated rab acceptor PRA1
IPR012340 - Nucleic acid-binding, OB-fold
IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 - RNA polymerase Rpb7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582352.1 DNA-directed RNA polymerase subunit 7-like protein, partial [Cucurbita argyrosperma subsp. sororia]4.0e-10597.98Show/hide
Query:  VYTIWEMFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGV
        +Y IWEMF EVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITF CRTFLPLEGEILHGV
Subjt:  VYTIWEMFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGV

Query:  VRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
        VRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
Subjt:  VRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL

KAG7018763.1 DNA-directed RNA polymerase subunit 7-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-267100Show/hide
Query:  MRAQFLPNSCRRPSSSSFSASAALDFSTNVRGQCEANVSFFDLFHLNPPSDGWMYDSKSQSETLSPSGWVYTIWEMFCEVELVRDVEVTVEKEKRDGVNL
        MRAQFLPNSCRRPSSSSFSASAALDFSTNVRGQCEANVSFFDLFHLNPPSDGWMYDSKSQSETLSPSGWVYTIWEMFCEVELVRDVEVTVEKEKRDGVNL
Subjt:  MRAQFLPNSCRRPSSSSFSASAALDFSTNVRGQCEANVSFFDLFHLNPPSDGWMYDSKSQSETLSPSGWVYTIWEMFCEVELVRDVEVTVEKEKRDGVNL

Query:  QRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHY
        QRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHY
Subjt:  QRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHY

Query:  VGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDLEEGGSRGIFRFFAFLFFLTSLPFIGAPAKSFQG
        VGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDLEEGGSRGIFRFFAFLFFLTSLPFIGAPAKSFQG
Subjt:  VGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDLEEGGSRGIFRFFAFLFFLTSLPFIGAPAKSFQG

Query:  SMPMSAAEFAVTFKEAGRSVIATRSPWREFLDPSVLSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLIYHPFSMIVLFLVFAAWFFLYFSRNDPL
        SMPMSAAEFAVTFKEAGRSVIATRSPWREFLDPSVLSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLIYHPFSMIVLFLVFAAWFFLYFSRNDPL
Subjt:  SMPMSAAEFAVTFKEAGRSVIATRSPWREFLDPSVLSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLIYHPFSMIVLFLVFAAWFFLYFSRNDPL

Query:  RVFGFDLDDLVLVIILGLTTGLALAGVFVNVLISLVIGAVVVCLHAALRATEDILGDLQDPFGDALLDSPRGDYSGF
        RVFGFDLDDLVLVIILGLTTGLALAGVFVNVLISLVIGAVVVCLHAALRATEDILGDLQDPFGDALLDSPRGDYSGF
Subjt:  RVFGFDLDDLVLVIILGLTTGLALAGVFVNVLISLVIGAVVVCLHAALRATEDILGDLQDPFGDALLDSPRGDYSGF

KAG7028853.1 DNA-directed RNA polymerase V subunit 7, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-15373.7Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR
        MFCEVELVRDV+V  EK  RDG+N QRYI+  LLENLLKE+ASKDHGYF+AVTSLKSIGKG+ KN  +SQ V+FPITF CRTF+P  GEIL GVVRH+FR
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDLEEGGSRGI
        RGLLLKCGPI YVFLS+RKMPTYHYVGG+NPVFSS + ATI  +  VRF+VLGVRW+EKRGCIKKEFVMLASLEG+ +LGPIS S++D+      GS  +
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDLEEGGSRGI

Query:  FRFFAFLFFLTSLPFIGAPAKSFQGSMPMSAAEFAVTFKEAGRSVIATRSPWREFLDPSVLSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLIYH
           +         P  G   ++FQ  +PMS AEFAVTFKEAGRSVIATR PWREFLDP  LSLPSSLS+AT+R+SQNLTRFLSNYCL++LLL+ LGLIYH
Subjt:  FRFFAFLFFLTSLPFIGAPAKSFQGSMPMSAAEFAVTFKEAGRSVIATRSPWREFLDPSVLSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLIYH

Query:  PFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDDLVLVIILGLTTGLALA--GVFVNVLISLVIGAVVVCLHAALRATEDILGDLQDPFGDALLDSPRGD
        PFSMIV FLVF AWF LYFSR+DP+RVFGF+L D VLVIILGL TGLALA  GVFVNVLISL IGA+VVCLHAAL+ TED LGDLQDPFGD LL+SPRGD
Subjt:  PFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDDLVLVIILGLTTGLALA--GVFVNVLISLVIGAVVVCLHAALRATEDILGDLQDPFGDALLDSPRGD

Query:  YSG
        YSG
Subjt:  YSG

XP_022924760.1 DNA-directed RNA polymerase V subunit 7-like [Cucurbita moschata]1.7e-10399.48Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR
        MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITF CRTFLPLEGEILHGVVRHIFR
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL

XP_022980115.1 DNA-directed RNA polymerase V subunit 7-like isoform X1 [Cucurbita maxima]1.0e-10097.4Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR
        MFCEVELVR+VEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK EVKNESESQCVSFPITF CRTFLPLEGEILHGVVRHIFR
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCI KEFVMLASLEGNTSLGPIS SDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL

TrEMBL top hitse value%identityAlignment
A0A1S3AWE2 DNA-directed RNA polymerase V subunit 7-like1.7e-9089.06Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR
        MF EVELVRDVE+TVEKEKRD  N QRYIITCLLENLLKEKA+KDHGYFL+VTSLKSIGKG VKN  ESQCVSFPITF CRTFLP EGEILHGVVRHIF+
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
        RGLLLKCGPIKY FLSARKMPTY YVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPIS SDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL

A0A5A7U0C3 DNA-directed RNA polymerase V subunit 7-like1.7e-9089.06Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR
        MF EVELVRDVE+TVEKEKRD  N QRYIITCLLENLLKEKA+KDHGYFL+VTSLKSIGKG VKN  ESQCVSFPITF CRTFLP EGEILHGVVRHIF+
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
        RGLLLKCGPIKY FLSARKMPTY YVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPIS SDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL

A0A6J1D1U6 DNA-directed RNA polymerase V subunit 7-like6.0e-9186.53Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGV-NLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIF
        MFCEVEL RDVEV  E EKRDG  N  RYIITCLLENLLKEKAS+DHGYFLAVT+LKSIGKGEVKNES+SQC+SFP+TF CRTFLP EGEILHGVVRHIF
Subjt:  MFCEVELVRDVEVTVEKEKRDGV-NLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIF

Query:  RRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
        RRGLLL+CGPIKYVFLSARKMPTY YVGG+NP+FSS + ATI NDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPISSS+SDEFDL
Subjt:  RRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL

A0A6J1EFY9 DNA-directed RNA polymerase V subunit 7-like8.1e-10499.48Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR
        MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITF CRTFLPLEGEILHGVVRHIFR
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL

A0A6J1IQI7 DNA-directed RNA polymerase V subunit 7-like isoform X14.9e-10197.4Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR
        MFCEVELVR+VEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK EVKNESESQCVSFPITF CRTFLPLEGEILHGVVRHIFR
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCI KEFVMLASLEGNTSLGPIS SDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDL

SwissProt top hitse value%identityAlignment
A6QRA1 DNA-directed RNA polymerase V subunit 72.9e-3440.98Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR
        MF +V+L  +V +  E     G+ L+R I+  LLE    +KA+K+ GY++AVT+L  IG+G+++  +    V FP+ F   TF   +GEI+HGVV  + +
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPIS
         G+ ++CGPI+ V+LS  KMP Y Y+ GENP+F + +++ I  +  VR  V+G++W+E    +++EF  LASLEG+  LGP+S
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPIS

P93829 PRA1 family protein D3.1e-2844.77Show/hide
Query:  KEAGRSVIATRSPWREFLDPSVLSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLIYHPFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDD-LVL
        KE  +S+     PW +FLD S  S PSS+++ATTR++QNLT F  NY ++L +L+ L LI  P +++    V  AWFFLYF+R +PL +FGF +DD +V 
Subjt:  KEAGRSVIATRSPWREFLDPSVLSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLIYHPFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDD-LVL

Query:  VIILGLTTG-LALAGVFVNVLISLVIGAVVVCLHAALRATEDILG-DLQDPFGDALL------DSPRGDYSG
        V+++GL+ G L   GV++  L ++  G +V+ LHAALR T+D++  DL+ P+G  L       D  RGDYSG
Subjt:  VIILGLTTG-LALAGVFVNVLISLVIGAVVVCLHAALRATEDILG-DLQDPFGDALL------DSPRGDYSG

Q6NML5 DNA-directed RNA polymerase subunit 7-like protein1.8e-3640.7Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKG-----EVKNESESQCVSFPITFRCRTFLPLEGEILHGVV
        MF EVE+ RDV +    +  +G +  + I+  LL++L+ EKA ++HG++L +T+LKSIG       + +N  +++ ++FP++F CRTFLP  G+IL G V
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKG-----EVKNESESQCVSFPITFRCRTFLPLEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F     + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPIS + SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE

Q8LE42 DNA-directed RNA polymerase IV subunit 76.3e-2940.33Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR
        MF +V+L  DV +  E +   G+ LQR I+  LLE   KEKA+KD GY +  T L++IG+G++K ++    + FP+ F    F   +GEI+HGVV  + +
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGP
         G+ LK GP + ++LS  KMP Y ++ GENP F +   + I     VRF VL   W E     +K+F+ LAS++G+ +LGP
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGP

Q9FRR1 PRA1 family protein E1.1e-2242.07Show/hide
Query:  KEAGRSVIATRSPWREFLDPSVLSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLIYHPFSMIVLFLVFAAWFFLYFSR--NDPLRVFGFDLDDLV
        K+  +S+I T  PWRE LD S LSLP     A   +  N++ F  NY L +L +V LGLIYHP SMI   +VF  W  LYFSR  ND + + G ++DD +
Subjt:  KEAGRSVIATRSPWREFLDPSVLSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLIYHPFSMIVLFLVFAAWFFLYFSR--NDPLRVFGFDLDDLV

Query:  LVIILGLTTGLAL--AGVFVNVLISLVIGAVVVCLHAALRATEDILGDLQDPFGDALLDSPRGD
        ++++L L T LAL    V  NVL+SL+IG ++V  H A R T+D+  D +      L+ +  G+
Subjt:  LVIILGLTTGLAL--AGVFVNVLISLVIGAVVVCLHAALRATEDILGDLQDPFGDALLDSPRGD

Arabidopsis top hitse value%identityAlignment
AT1G04260.1 CAMV movement protein interacting protein 72.2e-2944.77Show/hide
Query:  KEAGRSVIATRSPWREFLDPSVLSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLIYHPFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDD-LVL
        KE  +S+     PW +FLD S  S PSS+++ATTR++QNLT F  NY ++L +L+ L LI  P +++    V  AWFFLYF+R +PL +FGF +DD +V 
Subjt:  KEAGRSVIATRSPWREFLDPSVLSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLIYHPFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDD-LVL

Query:  VIILGLTTG-LALAGVFVNVLISLVIGAVVVCLHAALRATEDILG-DLQDPFGDALL------DSPRGDYSG
        V+++GL+ G L   GV++  L ++  G +V+ LHAALR T+D++  DL+ P+G  L       D  RGDYSG
Subjt:  VIILGLTTG-LALAGVFVNVLISLVIGAVVVCLHAALRATEDILG-DLQDPFGDALL------DSPRGDYSG

AT4G14520.1 DNA-directed RNA polymerase II-related1.3e-3740.7Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKG-----EVKNESESQCVSFPITFRCRTFLPLEGEILHGVV
        MF EVE+ RDV +    +  +G +  + I+  LL++L+ EKA ++HG++L +T+LKSIG       + +N  +++ ++FP++F CRTFLP  G+IL G V
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKG-----EVKNESESQCVSFPITFRCRTFLPLEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F     + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPIS + SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE

AT4G14520.2 DNA-directed RNA polymerase II-related1.3e-3740.7Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKG-----EVKNESESQCVSFPITFRCRTFLPLEGEILHGVV
        MF EVE+ RDV +    +  +G +  + I+  LL++L+ EKA ++HG++L +T+LKSIG       + +N  +++ ++FP++F CRTFLP  G+IL G V
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKG-----EVKNESESQCVSFPITFRCRTFLPLEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F     + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPIS + SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE

AT4G14520.3 DNA-directed RNA polymerase II-related1.3e-3740.7Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKG-----EVKNESESQCVSFPITFRCRTFLPLEGEILHGVV
        MF EVE+ RDV +    +  +G +  + I+  LL++L+ EKA ++HG++L +T+LKSIG       + +N  +++ ++FP++F CRTFLP  G+IL G V
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKG-----EVKNESESQCVSFPITFRCRTFLPLEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F     + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPIS + SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDE

AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain2.1e-3540.98Show/hide
Query:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR
        MF +V+L  +V +  E     G+ L+R I+  LLE    +KA+K+ GY++AVT+L  IG+G+++  +    V FP+ F   TF   +GEI+HGVV  + +
Subjt:  MFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPIS
         G+ ++CGPI+ V+LS  KMP Y Y+ GENP+F + +++ I  +  VR  V+G++W+E    +++EF  LASLEG+  LGP+S
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCGCCCAATTTCTTCCTAATTCTTGCCGCCGCCCCTCCTCCTCCTCCTTCTCCGCCTCCGCTGCTCTTGATTTTTCCACTAATGTTAGAGGCCAATGTGAAGCAAA
TGTTTCCTTCTTTGATTTATTTCATCTTAATCCTCCAAGTGATGGTTGGATGTATGACTCAAAATCTCAGTCTGAAACACTTTCTCCAAGTGGATGGGTTTACACGATCT
GGGAAATGTTTTGTGAAGTGGAACTAGTGAGAGATGTGGAAGTCACGGTGGAAAAGGAAAAGAGAGATGGTGTCAACTTGCAGAGGTACATTATAACATGTCTATTAGAA
AACCTCTTGAAGGAGAAGGCCAGCAAAGACCATGGCTATTTTCTTGCTGTTACTAGCTTGAAGAGCATAGGGAAGGGAGAGGTCAAGAATGAGTCTGAGTCACAATGTGT
TTCATTCCCCATTACCTTTAGATGCCGAACCTTTTTGCCTTTGGAGGGAGAGATCTTGCATGGAGTTGTTCGTCACATATTTCGGCGTGGATTACTCTTAAAATGTGGAC
CGATCAAGTACGTGTTTCTTTCAGCTCGTAAAATGCCAACCTACCATTATGTTGGAGGTGAAAATCCTGTCTTCTCGAGCACCCAATCTGCAACGATTGGAAATGATGTC
GTTGTACGGTTCAGTGTGCTTGGTGTGAGATGGTTAGAGAAAAGAGGATGCATCAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAACACCTCACTTGGACCCAT
TTCATCGTCCGACTCCGACGAGTTTGACTTGGAAGAAGGCGGGAGTCGTGGGATCTTCCGCTTCTTTGCGTTTCTCTTTTTCTTGACTTCATTACCATTCATTGGAGCTC
CGGCAAAAAGCTTCCAGGGTTCTATGCCAATGTCTGCCGCTGAATTCGCCGTCACTTTCAAGGAAGCTGGTCGATCCGTCATCGCCACTCGCTCCCCATGGCGGGAATTC
TTAGACCCATCTGTTCTTAGCCTTCCTTCTTCCCTCTCCAACGCTACGACTCGAATGTCTCAGAACTTGACCCGTTTCCTTTCCAATTACTGTCTTCTCCTCTTGCTCCT
CGTCTTACTTGGCCTCATCTACCATCCATTTTCAATGATTGTCTTGTTCCTCGTCTTTGCTGCCTGGTTCTTCCTTTACTTCTCTCGCAACGACCCACTTAGGGTTTTTG
GTTTTGACTTGGACGATTTGGTTTTGGTCATCATTCTTGGATTGACTACTGGATTGGCGCTGGCGGGCGTTTTTGTGAATGTGCTGATTTCGCTTGTAATTGGGGCGGTG
GTGGTCTGCTTGCATGCGGCTTTGAGGGCTACGGAGGATATTCTTGGAGATTTGCAGGACCCTTTTGGGGATGCCCTGTTGGATAGTCCAAGAGGTGATTATAGCGGCTT
CTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCGCCCAATTTCTTCCTAATTCTTGCCGCCGCCCCTCCTCCTCCTCCTTCTCCGCCTCCGCTGCTCTTGATTTTTCCACTAATGTTAGAGGCCAATGTGAAGCAAA
TGTTTCCTTCTTTGATTTATTTCATCTTAATCCTCCAAGTGATGGTTGGATGTATGACTCAAAATCTCAGTCTGAAACACTTTCTCCAAGTGGATGGGTTTACACGATCT
GGGAAATGTTTTGTGAAGTGGAACTAGTGAGAGATGTGGAAGTCACGGTGGAAAAGGAAAAGAGAGATGGTGTCAACTTGCAGAGGTACATTATAACATGTCTATTAGAA
AACCTCTTGAAGGAGAAGGCCAGCAAAGACCATGGCTATTTTCTTGCTGTTACTAGCTTGAAGAGCATAGGGAAGGGAGAGGTCAAGAATGAGTCTGAGTCACAATGTGT
TTCATTCCCCATTACCTTTAGATGCCGAACCTTTTTGCCTTTGGAGGGAGAGATCTTGCATGGAGTTGTTCGTCACATATTTCGGCGTGGATTACTCTTAAAATGTGGAC
CGATCAAGTACGTGTTTCTTTCAGCTCGTAAAATGCCAACCTACCATTATGTTGGAGGTGAAAATCCTGTCTTCTCGAGCACCCAATCTGCAACGATTGGAAATGATGTC
GTTGTACGGTTCAGTGTGCTTGGTGTGAGATGGTTAGAGAAAAGAGGATGCATCAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAACACCTCACTTGGACCCAT
TTCATCGTCCGACTCCGACGAGTTTGACTTGGAAGAAGGCGGGAGTCGTGGGATCTTCCGCTTCTTTGCGTTTCTCTTTTTCTTGACTTCATTACCATTCATTGGAGCTC
CGGCAAAAAGCTTCCAGGGTTCTATGCCAATGTCTGCCGCTGAATTCGCCGTCACTTTCAAGGAAGCTGGTCGATCCGTCATCGCCACTCGCTCCCCATGGCGGGAATTC
TTAGACCCATCTGTTCTTAGCCTTCCTTCTTCCCTCTCCAACGCTACGACTCGAATGTCTCAGAACTTGACCCGTTTCCTTTCCAATTACTGTCTTCTCCTCTTGCTCCT
CGTCTTACTTGGCCTCATCTACCATCCATTTTCAATGATTGTCTTGTTCCTCGTCTTTGCTGCCTGGTTCTTCCTTTACTTCTCTCGCAACGACCCACTTAGGGTTTTTG
GTTTTGACTTGGACGATTTGGTTTTGGTCATCATTCTTGGATTGACTACTGGATTGGCGCTGGCGGGCGTTTTTGTGAATGTGCTGATTTCGCTTGTAATTGGGGCGGTG
GTGGTCTGCTTGCATGCGGCTTTGAGGGCTACGGAGGATATTCTTGGAGATTTGCAGGACCCTTTTGGGGATGCCCTGTTGGATAGTCCAAGAGGTGATTATAGCGGCTT
CTGA
Protein sequenceShow/hide protein sequence
MRAQFLPNSCRRPSSSSFSASAALDFSTNVRGQCEANVSFFDLFHLNPPSDGWMYDSKSQSETLSPSGWVYTIWEMFCEVELVRDVEVTVEKEKRDGVNLQRYIITCLLE
NLLKEKASKDHGYFLAVTSLKSIGKGEVKNESESQCVSFPITFRCRTFLPLEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDV
VVRFSVLGVRWLEKRGCIKKEFVMLASLEGNTSLGPISSSDSDEFDLEEGGSRGIFRFFAFLFFLTSLPFIGAPAKSFQGSMPMSAAEFAVTFKEAGRSVIATRSPWREF
LDPSVLSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLIYHPFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDDLVLVIILGLTTGLALAGVFVNVLISLVIGAV
VVCLHAALRATEDILGDLQDPFGDALLDSPRGDYSGF