CuGenDBv2

Gene ID	Carg16612
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DET1- and DDB1-associated protein 1
Genome location	Carg_Chr15:8898847..8901618
RNA-Seq Expression	Carg16612
Synteny	Carg16612
Gene Ontology terms	GO:0009788 - negative regulation of abscisic acid-activated signaling pathway (biological process) GO:0032436 - positive regulation of proteasomal ubiquitin-dependent protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0080008 - Cul4-RING E3 ubiquitin ligase complex (cellular component)
InterPro domains	IPR018276 - DET1- and DDB1-associated protein 1, N-terminal IPR033575 - DET1- and DDB1-associated protein 1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6579532.1 DET1- and DDB1-associated protein 1, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-46

100

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Query:  MLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
        MLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
Subjt:  MLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN

XP_004143885.1 DET1- and DDB1-associated protein 1 isoform X1 [Cucumis sativus]

1.2e-43

93.94

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVI+T+AKNILIRHIYQ TEEKSRTKRPAAEHP+PEHGSKQPRA STTN SN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN

XP_022157123.1 DET1- and DDB1-associated protein 1 isoform X1 [Momordica charantia]

3.4e-43

93.94

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVI+T+AKNILIRHIYQ T EKSRTKRPAAEHPVPEHGSKQPRA STTN SN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN

XP_022928761.1 DET1- and DDB1-associated protein 1-like [Cucurbita moschata]

3.5e-48

100

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN

XP_038906812.1 DET1- and DDB1-associated protein 1 isoform X1 [Benincasa hispida]

2.0e-43

93.94

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVI+T+AKNILIRHIYQ TEEKSRTKRPAAEHP PEHGSKQPRASS TN SN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKG6 DET1- and DDB1-associated protein 1

5.7e-44

93.94

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVI+T+AKNILIRHIYQ TEEKSRTKRPAAEHP+PEHGSKQPRA STTN SN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN

A0A1S3AUC0 DET1- and DDB1-associated protein 1

5.7e-44

93.94

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVI+T+AKNILIRHIYQ TEEKSRTKRPAAEHP+PEHGSKQPRA STTN SN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN

A0A6J1DSK3 DET1- and DDB1-associated protein 1

1.6e-43

93.94

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVI+T+AKNILIRHIYQ T EKSRTKRPAAEHPVPEHGSKQPRA STTN SN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN

A0A6J1EL76 DET1- and DDB1-associated protein 1

1.7e-48

100

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN

A0A6J1I2X6 DET1- and DDB1-associated protein 1

1.7e-48

100

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
        MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN

SwissProt top hits

e value

%identity

Alignment

Q9FFS4 DET1- and DDB1-associated protein 1

2.0e-30

66.33

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNAS
        M S+LGDLPS+DPHNFSQ RPSDPS PSKM+P TY PTH+RTLPPPDQVI T+ KNILIR  YQ  EEK R KRPA +H   EH +K  RA+S+++++
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNAS

Arabidopsis top hits

e value

%identity

Alignment

AT5G41560.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin ligase, Det1/DDB1-complexing (InterPro:IPR018276); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

1.4e-31

66.33

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Query:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNAS
        M S+LGDLPS+DPHNFSQ RPSDPS PSKM+P TY PTH+RTLPPPDQVI T+ KNILIR  YQ  EEK R KRPA +H   EH +K  RA+S+++++
Subjt:  MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNAS

Sequences

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CDS sequence

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ATGGGGTCTATGCTCGGTGACCTGCCGTCATATGACCCTCACAACTTCAGCCAACTCCGACCCTCCGATCCTTCAACTCCTTCTAAGATGATTCCTGCAACCTATCATCC
TACCCACAGTAGGACCCTTCCGCCACCAGATCAGGTTATAGATACTGATGCCAAAAATATACTCATACGCCACATTTATCAGCTTACAGAAGAGAAGTCAAGAACAAAGA
GACCTGCAGCTGAACATCCCGTGCCGGAGCATGGAAGCAAGCAACCAAGAGCATCATCTACTACCAACGCTTCAAATTGA

mRNA sequence

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TCCTCCTCCTCCTCCTCCTCCTCCTCGTTCTTGTAACACAAATTTCCCTCTGTAGATTTCGAACAATCAAAATATATTCAGCGGCGTTTTGATGGGGTCTATGCTCGGTG
ACCTGCCGTCATATGACCCTCACAACTTCAGCCAACTCCGACCCTCCGATCCTTCAACTCCTTCTAAGATGATTCCTGCAACCTATCATCCTACCCACAGTAGGACCCTT
CCGCCACCAGATCAGGTTATAGATACTGATGCCAAAAATATACTCATACGCCACATTTATCAGCTTACAGAAGAGAAGTCAAGAACAAAGAGACCTGCAGCTGAACATCC
CGTGCCGGAGCATGGAAGCAAGCAACCAAGAGCATCATCTACTACCAACGCTTCAAATTGAGGTTAGGCGGACATTTTCTTCCAACAATGTAGAATCTGTTGTACGTTGT
GAAAGATGTGTCCTGTATAATGCAAGCGAATTGCCTGCTCACTGAAGAACAAACAGGTCGGCCCCGACATTTAAATGCTGTATATAGATTTTACTCCTACTAAGATTGTC
CTAAACTCAGCCACTGCATATTGTTCTCAATATCATAAACTTGGTTCAAGTATTGTAACTATTTTGTCTCTAAATTTTCGAGTTTGATCTATATTGGTTATTGAGTTTTC
AAATTTGTTTTGTTTCTGTTCTTGAACTTCAAAATATTTTAGTTTAATTGTTGACTTTATAAAAAATAGTTGACTTGAATCATGGGCTTACCATTTAGTAGAGGCATAAT
GCCTCTGTCTAACAGCC

Protein sequence

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MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVIDTDAKNILIRHIYQLTEEKSRTKRPAAEHPVPEHGSKQPRASSTTNASN

Carg16612 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome