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Carg16647 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16647
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontetraspanin-10-like
Genome locationCarg_Chr15:8623402..8626522
RNA-Seq ExpressionCarg16647
SyntenyCarg16647
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009506 - plasmodesma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR018499 - Tetraspanin/Peripherin
IPR044991 - Tetraspani, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579494.1 Tetraspanin-10, partial [Cucurbita argyrosperma subsp. sororia]5.4e-4677.37Show/hide
Query:  LSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDY
        L +  G+ +G       G +    L  +   G IF   SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDY
Subjt:  LSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDY

Query:  STWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL
        STWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYK L
Subjt:  STWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL

KAG7016957.1 Tetraspanin-10 [Cucurbita argyrosperma subsp. argyrosperma]3.2e-115100Show/hide
Query:  MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEEPPFFLFSIFCPFWPCLSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKN
        MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEEPPFFLFSIFCPFWPCLSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKN
Subjt:  MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEEPPFFLFSIFCPFWPCLSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKN

Query:  NSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVLVSSSVDLSKRVI
        NSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVLVSSSVDLSKRVI
Subjt:  NSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVLVSSSVDLSKRVI

Query:  FLSSLPHDSRFV
        FLSSLPHDSRFV
Subjt:  FLSSLPHDSRFV

XP_022928822.1 tetraspanin-10-like isoform X1 [Cucurbita moschata]5.4e-4677.37Show/hide
Query:  LSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDY
        L +  G+ +G       G +    L  +   G IF   SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDY
Subjt:  LSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDY

Query:  STWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL
        STWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYK L
Subjt:  STWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL

XP_022928823.1 tetraspanin-10-like isoform X2 [Cucurbita moschata]5.0e-7678.72Show/hide
Query:  MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEEPPFFLFSIFCPFWPCLSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKN
        MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEE PFFLF IFCPFWPCLSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPW           
Subjt:  MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEEPPFFLFSIFCPFWPCLSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKN

Query:  NSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL
                                  FIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYK L
Subjt:  NSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL

XP_023549833.1 tetraspanin-10-like [Cucurbita pepo subsp. pepo]7.0e-4676.64Show/hide
Query:  LSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDY
        L +  G+ +G       G +    L  +   G IF   SIVGFLGALKNNSILLWIYLIMLC+TLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDY
Subjt:  LSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDY

Query:  STWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL
        STWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYK L
Subjt:  STWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL

TrEMBL top hitse value%identityAlignment
A0A0A0KNY7 Uncharacterized protein9.3e-4472.34Show/hide
Query:  FWPCLSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQ
        F   L +  G+ +G       G +    L  +   G IF   SIVGFLGALKNNSILLWIYLIMLCITLV ILVFTVLAFIVTNNGSGH VAGLRYKEYQ
Subjt:  FWPCLSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQ

Query:  LQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL
        LQDYSTWFLKQLNNT+NWM L+SCLVKSEDCNNLSKRYK L
Subjt:  LQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL

A0A1S3ATI6 tetraspanin-109.3e-4472.34Show/hide
Query:  FWPCLSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQ
        F   L +  G+ +G       G +    L  +   G IF   SIVGFLGALKNNSILLWIYLIMLCITLV ILVFTVLAFIVTNNGSGH VAGLRYKEYQ
Subjt:  FWPCLSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQ

Query:  LQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL
        LQDYSTWFLKQLNNT+NWM L+SCLVKSEDCNNLSKRYK L
Subjt:  LQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL

A0A6J1EL06 tetraspanin-10-like isoform X12.6e-4677.37Show/hide
Query:  LSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDY
        L +  G+ +G       G +    L  +   G IF   SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDY
Subjt:  LSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDY

Query:  STWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL
        STWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYK L
Subjt:  STWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL

A0A6J1EQ67 tetraspanin-10-like isoform X22.4e-7678.72Show/hide
Query:  MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEEPPFFLFSIFCPFWPCLSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKN
        MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEE PFFLF IFCPFWPCLSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPW           
Subjt:  MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEEPPFFLFSIFCPFWPCLSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKN

Query:  NSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL
                                  FIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYK L
Subjt:  NSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL

A0A6J1I237 tetraspanin-10-like2.2e-4575.91Show/hide
Query:  LSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDY
        L +  G+ +G       G +    L  +   G IF   SIVGFLGALKNNSILLWIYLIMLCITLVAI VFTVLAFIVTNNGSGHSVAGLRYKEYQLQDY
Subjt:  LSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDY

Query:  STWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL
        STWFLKQLNNTDNWMHLRSCLVKSEDCNN SKRYK L
Subjt:  STWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL

SwissProt top hitse value%identityAlignment
F4I214 Tetraspanin-106.4e-3472.73Show/hide
Query:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL
        SI+GFLGA K +  LLWIYL +L I L+AILVFTVLAFIVTNNGSGH+  GLRYKEY+L DYS+WFLKQLNNT NW+ L+SCLVKSE C  LSK+YK +
Subjt:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL

Q8S8Q6 Tetraspanin-83.5e-1641.67Show/hide
Query:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRY
        +I G +G+    + LLW+YL ++ + ++ +   TV AF+VTN G+G ++ G  YKEY+L DYSTW  K++ N  NW  +RSCLV+S+ C+ L  ++
Subjt:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRY

Q9M0B7 Tetraspanin-93.3e-1441.3Show/hide
Query:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNL
        +I G +G+    + LLW YL ++   ++ +L FT+ AF+VT+ GSG ++ G  YKEY+L+ YS W  +++NN  +W  +RSCL +S+ C NL
Subjt:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNL

Q9M1E7 Tetraspanin-33.4e-1133.33Show/hide
Query:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRY
        S+ GF GA   N  L+W+YL+++ + + A++ F + A+ VT+ GSG +V    Y +Y L+DYS W   ++++   W  + SCL  S  C  + + +
Subjt:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRY

Q9SUD4 Tetraspanin-75.1e-1542.71Show/hide
Query:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRY
        SI G +GA    S LLW+YL  + + ++    FT+ AF VTN G+G  ++   YKEY + DYS W  K++NN  NW  +RSCL+ S+ C+    RY
Subjt:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRY

Arabidopsis top hitse value%identityAlignment
AT1G63260.1 tetraspanin104.6e-3572.73Show/hide
Query:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL
        SI+GFLGA K +  LLWIYL +L I L+AILVFTVLAFIVTNNGSGH+  GLRYKEY+L DYS+WFLKQLNNT NW+ L+SCLVKSE C  LSK+YK +
Subjt:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL

AT1G63260.2 tetraspanin104.6e-3572.73Show/hide
Query:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL
        SI+GFLGA K +  LLWIYL +L I L+AILVFTVLAFIVTNNGSGH+  GLRYKEY+L DYS+WFLKQLNNT NW+ L+SCLVKSE C  LSK+YK +
Subjt:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL

AT1G63260.3 tetraspanin104.6e-3572.73Show/hide
Query:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL
        SI+GFLGA K +  LLWIYL +L I L+AILVFTVLAFIVTNNGSGH+  GLRYKEY+L DYS+WFLKQLNNT NW+ L+SCLVKSE C  LSK+YK +
Subjt:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVL

AT2G23810.1 tetraspanin82.5e-1741.67Show/hide
Query:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRY
        +I G +G+    + LLW+YL ++ + ++ +   TV AF+VTN G+G ++ G  YKEY+L DYSTW  K++ N  NW  +RSCLV+S+ C+ L  ++
Subjt:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRY

AT4G28050.1 tetraspanin73.6e-1642.71Show/hide
Query:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRY
        SI G +GA    S LLW+YL  + + ++    FT+ AF VTN G+G  ++   YKEY + DYS W  K++NN  NW  +RSCL+ S+ C+    RY
Subjt:  SIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTTGCCCTTATTTCATTATCCCTACTCCACCCCACCACCTCACTCTAGCCGCTTCTCTTTGCTTGCAGTGCAAGTGCCACTTCCTCAGCTAAGCTCTGAAGAACC
TCCATTCTTTCTCTTTTCTATATTTTGCCCTTTTTGGCCCTGTTTATCTCTGTTTCTGGGTGTGGCGTTGGGGATAAGGAGGTTCAAGGGAAGAGGGGCAAAATGGGAAT
GGGAACTAGCATCTTTATCATCAGATGGATCAATTTTCTCACCATGGTCCATAGTTGGTTTCTTGGGTGCTCTTAAGAACAATTCGATATTGCTGTGGATCTATTTGATC
ATGTTGTGCATTACGTTGGTGGCGATTCTCGTGTTTACCGTGCTGGCGTTCATCGTTACAAATAACGGATCGGGACATTCCGTTGCTGGCTTGAGGTACAAGGAGTATCA
ACTACAAGACTATAGTACATGGTTTCTAAAACAGCTTAATAATACTGATAACTGGATGCATTTGAGAAGCTGTCTCGTTAAATCCGAGGACTGCAACAATCTTTCGAAAC
GATACAAGGTTCTTGTTTCAAGCTCGGTCGATTTGAGTAAAAGAGTGATTTTTCTATCGTCTCTTCCTCACGATAGTCGTTTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
TTTTTTTTTTCCTTTGACGAAAATGCCCTTGCCCTTATTTCATTATCCCTACTCCACCCCACCACCTCACTCTAGCCGCTTCTCTTTGCTTGCAGTGCAAGTGCCACTTC
CTCAGCTAAGCTCTGAAGAACCTCCATTCTTTCTCTTTTCTATATTTTGCCCTTTTTGGCCCTGTTTATCTCTGTTTCTGGGTGTGGCGTTGGGGATAAGGAGGTTCAAG
GGAAGAGGGGCAAAATGGGAATGGGAACTAGCATCTTTATCATCAGATGGATCAATTTTCTCACCATGGTCCATAGTTGGTTTCTTGGGTGCTCTTAAGAACAATTCGAT
ATTGCTGTGGATCTATTTGATCATGTTGTGCATTACGTTGGTGGCGATTCTCGTGTTTACCGTGCTGGCGTTCATCGTTACAAATAACGGATCGGGACATTCCGTTGCTG
GCTTGAGGTACAAGGAGTATCAACTACAAGACTATAGTACATGGTTTCTAAAACAGCTTAATAATACTGATAACTGGATGCATTTGAGAAGCTGTCTCGTTAAATCCGAG
GACTGCAACAATCTTTCGAAACGATACAAGGTTCTTGTTTCAAGCTCGGTCGATTTGAGTAAAAGAGTGATTTTTCTATCGTCTCTTCCTCACGATAGTCGTTTTGTTTG
ATAATTTCAGACTCTCAAGCAGTACAAGTTA
Protein sequenceShow/hide protein sequence
MPLPLFHYPYSTPPPHSSRFSLLAVQVPLPQLSSEEPPFFLFSIFCPFWPCLSLFLGVALGIRRFKGRGAKWEWELASLSSDGSIFSPWSIVGFLGALKNNSILLWIYLI
MLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKVLVSSSVDLSKRVIFLSSLPHDSRFV