CuGenDBv2

Gene ID	Carg16677
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein LITTLE ZIPPER 1-like
Genome location	Carg_Chr15:8385834..8386384
RNA-Seq Expression	Carg16677
Synteny	Carg16677
Gene Ontology terms	NA
InterPro domains	IPR039312 - Protein LITTLE ZIPPER

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8647881.1 hypothetical protein Csa_000025 [Cucumis sativus]

3.7e-34

83.51

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Query:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
        MC+ ATQS+LFH IQ+SKN+R SKRS  QVLRLT RRRCEEKLGKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+AL+TEFQKKFPHL QRK
Subjt:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK

KAG6579456.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia]

2.1e-42

100

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Query:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
        MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
Subjt:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK

KAG7036101.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.5e-31

80.61

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Query:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLT--RRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
        MCI ATQ ILFHQI TSKN+RR KRSKLQV RL+  RR  EEK GKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEF KKFPH +QRK
Subjt:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLT--RRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK

XP_022922429.1 protein LITTLE ZIPPER 1-like [Cucurbita moschata]

2.4e-41

97.92

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Query:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
        MCI ATQSILFHQIQTSKN+RRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
Subjt:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK

XP_023534553.1 protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo]

7.6e-32

82.47

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Query:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRC-EEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
        MCI ATQ ILFHQI TSKN+RR KRSKLQV RL+RRR  EEK GKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEF KKFPH +QRK
Subjt:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRC-EEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKF8 Uncharacterized protein

7.2e-36

84.38

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Query:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
        MC+ ATQS+LFH IQ+SKN+R SKRS  QVLRLTRRRCEEKLGKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+AL+TEFQKKFPHL QRK
Subjt:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK

A0A6J1DZF5 protein LITTLE ZIPPER 2-like isoform X2

5.0e-29

79.17

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Query:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLT-RRRC-EEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQ
        MCI AT+S  FHQI TSKN+RR KRSKLQV RLT RRRC EEK+GKDIELKNLQLYL+NQTII+EN+KLRE+ANILHQEN+ALMTE QKKF HL++
Subjt:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLT-RRRC-EEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQ

A0A6J1E319 protein LITTLE ZIPPER 2-like isoform X1

2.0e-30

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Query:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRC-EEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQ
        MCI AT+S  FHQI TSKN+RR KRSKLQV RLTRRRC EEK+GKDIELKNLQLYL+NQTII+EN+KLRE+ANILHQEN+ALMTE QKKF HL++
Subjt:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRC-EEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQ

A0A6J1E3C5 protein LITTLE ZIPPER 1-like

1.1e-41

97.92

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Query:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
        MCI ATQSILFHQIQTSKN+RRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK
Subjt:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK

B9RBV5 Uncharacterized protein

1.7e-21

59.57

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Query:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQ
        MCI   +         +K K+RSK+ K+QVL LTRRRC+E+ GKD+ELKNL+LYL+NQ+I++EN+KLR+KAN+LHQEN+AL++EFQKKFPH+ +
Subjt:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQ

SwissProt top hits

e value

%identity

Alignment

F4IG60 Protein LITTLE ZIPPER 1

5.7e-06

38.64

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Query:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKK
        MC+ ++++  F    T        +S +++ RL+RRR   +  K +E+ NL+LY++NQ II+EN+KL++KA +LHQEN  L +  Q K
Subjt:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKK

Q9LZX5 Protein LITTLE ZIPPER 2

6.8e-07

45.07

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Query:  KRRSK-RSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKF
        K +SK ++ L++L LTRRR   K  K++E++NL+L+++NQ+II+EN+ L++KA +LH EN AL      K+
Subjt:  KRRSK-RSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKF

Arabidopsis top hits

e value

%identity

Alignment

AT2G45450.1 protein binding

4.1e-07

38.64

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Query:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKK
        MC+ ++++  F    T        +S +++ RL+RRR   +  K +E+ NL+LY++NQ II+EN+KL++KA +LHQEN  L +  Q K
Subjt:  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKK

AT3G60890.1 protein binding

4.8e-08

45.07

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Query:  KRRSK-RSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKF
        K +SK ++ L++L LTRRR   K  K++E++NL+L+++NQ+II+EN+ L++KA +LH EN AL      K+
Subjt:  KRRSK-RSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKF

AT3G60890.2 protein binding

1.2e-06

44.44

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Query:  KRRSK-RSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKF
        K +SK ++ L++L LT RRR   K  K++E++NL+L+++NQ+II+EN+ L++KA +LH EN AL      K+
Subjt:  KRRSK-RSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKF

Sequences

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CDS sequence

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ATGTGCATCAGAGCAACGCAGAGTATTCTATTCCATCAAATTCAGACTTCCAAGAACAAGAGACGATCAAAAAGATCCAAACTTCAAGTTCTAAGGCTTACCAGGAGGAG
ATGTGAAGAGAAGCTGGGGAAAGACATTGAGCTGAAGAATCTGCAGCTATATCTGAAGAATCAGACCATAATCAAAGAGAATGATAAGCTGAGAGAGAAAGCCAATATCC
TTCATCAAGAGAACATAGCTTTAATGACTGAGTTTCAGAAAAAATTCCCACATTTGAATCAGAGAAAATGA

mRNA sequence

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CAATATCTACTAGCAGTGAGCTTGGGCTGTTACACTGTCTGTCTTCCGTGAGTCTACACTGTCTATATAAGTATTGGCTTTAGTCCTACTGTTTCCCCTGCAACTTCCTT
ACATTATTCAACTAGCAAGGAAGGGCAAAAGTTAAGAAGCTGCATAGAAGAATAATGTGCATCAGAGCAACGCAGAGTATTCTATTCCATCAAATTCAGACTTCCAAGAA
CAAGAGACGATCAAAAAGATCCAAACTTCAAGTTCTAAGGCTTACCAGGAGGAGATGTGAAGAGAAGCTGGGGAAAGACATTGAGCTGAAGAATCTGCAGCTATATCTGA
AGAATCAGACCATAATCAAAGAGAATGATAAGCTGAGAGAGAAAGCCAATATCCTTCATCAAGAGAACATAGCTTTAATGACTGAGTTTCAGAAAAAATTCCCACATTTG
AATCAGAGAAAATGA

Protein sequence

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MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLKNQTIIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK

Carg16677 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome