; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16683 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16683
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationCarg_Chr15:8348321..8351819
RNA-Seq ExpressionCarg16683
SyntenyCarg16683
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016922.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-136100Show/hide
Query:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLAIKFWPQYYILTALKLPKKLYMYI
        MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLAIKFWPQYYILTALKLPKKLYMYI
Subjt:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLAIKFWPQYYILTALKLPKKLYMYI

Query:  NGPGGDSLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQIIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPR
        NGPGGDSLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQIIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPR
Subjt:  NGPGGDSLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQIIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPR

Query:  KDPESENFLKSKRLICNFHSFRIYYCVHFDQISYMKHIKNGSHYIKLF
        KDPESENFLKSKRLICNFHSFRIYYCVHFDQISYMKHIKNGSHYIKLF
Subjt:  KDPESENFLKSKRLICNFHSFRIYYCVHFDQISYMKHIKNGSHYIKLF

XP_008437161.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucumis melo]7.0e-5348.25Show/hide
Query:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLA----------------IKFWPQY
        MAVSS  C QPQI VSQPSLS  TKV+SGLK QSASPFGG KPNIT EF GKVHKSLQA   N+ ++  +  M  +                 +  W   
Subjt:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLA----------------IKFWPQY

Query:  Y------------------------ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPL
        Y                         L +++  +K YMYINGPGGD            SL SPVATHCVG AYN+AAFLLAAGEK       GNR AMPL
Subjt:  Y------------------------ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPL

Query:  SRIALQPPSGAARGQ--------------------------------IIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD
        SRIALQ P+G+ARGQ                                I KD++R+K F AQ+ALDYGLIDRI RPPRIKADAPRKD
Subjt:  SRIALQPPSGAARGQ--------------------------------IIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD

XP_022158384.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Momordica charantia]1.5e-5550Show/hide
Query:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLA----------------IKFWPQY
        MAVSS+ CLQPQI VSQP LS ATK++SGLKLQSA PFGGAKPN+T EF GKVHKSL +   N+ ++  +  M  +                 +  W   
Subjt:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLA----------------IKFWPQY

Query:  Y------------------------ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPL
        Y                         L +++  KKLYMYINGPGGD            SL+SPVATHCVG AYNLAAFLLAAGEK       GNR AMPL
Subjt:  Y------------------------ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPL

Query:  SRIALQPPSGAARGQ--------------------------------IIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD
        SRIALQ P+GAARGQ                                I KD++RMKRF AQ+ALDYGLIDRIVRPPRIKADAPRKD
Subjt:  SRIALQPPSGAARGQ--------------------------------IIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD

XP_023551138.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-like [Cucurbita pepo subsp. pepo]2.2e-5957.09Show/hide
Query:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLAIKFWPQYYILTALKLPKKLYMYI
        MAVSSAQ LQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNIT EF GKVHKS  +     +  +G+ + +  +        + T ++  KKLYMYI
Subjt:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLAIKFWPQYYILTALKLPKKLYMYI

Query:  NGPGG---------------------------DSLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQ----------
          P                              SLQSPVATHCVG AYNLA FLLAAGEK       GNRSAMPLSRIALQPPSGAARGQ          
Subjt:  NGPGG---------------------------DSLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQ----------

Query:  ----------------------IIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD
                              I KDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD
Subjt:  ----------------------IIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD

XP_038906920.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Benincasa hispida]6.7e-5650.35Show/hide
Query:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLA----------------IKFWPQY
        MAVSS  CLQPQI VSQP LS  TKV+SGLK QSASPFGGAKPN+T EF GKVHKSLQA  +N+ ++  +  M  +                 +  W   
Subjt:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLA----------------IKFWPQY

Query:  Y------------------------ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPL
        Y                         L +++  KKLYMYINGPGGD            SL+SPVATHCVG AYNLAAFLLAAGEK       GNR AMPL
Subjt:  Y------------------------ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPL

Query:  SRIALQPPSGAARGQ--------------------------------IIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD
        SRIALQ P+GAARGQ                                I +D++RMKRF AQ+ALDYGLIDRIVRPPRIKADAPRKD
Subjt:  SRIALQPPSGAARGQ--------------------------------IIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD

TrEMBL top hitse value%identityAlignment
A0A0A0KKQ7 ATP-dependent Clp protease proteolytic subunit2.2e-5247.9Show/hide
Query:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLA----------------IKFWPQY
        MAV+S  CLQPQI VSQPSLSVATKV++GLK QSASPFGGAKPNIT EF GKVHKSLQ    N+ ++  +  M  +                 +  W   
Subjt:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLA----------------IKFWPQY

Query:  Y------------------------ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPL
        Y                         L +++  KKLY+YINGPGGD            SL+SP+ATHC+G AYN+AAFLLAAGEK       GNRSAMPL
Subjt:  Y------------------------ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPL

Query:  SRIALQPPSGAARG--------------------------------QIIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD
        SRIALQ P+G+ARG                                +I KD++  KRF AQQAL+YGLIDRI RP RIKADAPRKD
Subjt:  SRIALQPPSGAARG--------------------------------QIIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD

A0A1S3ATH1 ATP-dependent Clp protease proteolytic subunit3.4e-5348.25Show/hide
Query:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLA----------------IKFWPQY
        MAVSS  C QPQI VSQPSLS  TKV+SGLK QSASPFGG KPNIT EF GKVHKSLQA   N+ ++  +  M  +                 +  W   
Subjt:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLA----------------IKFWPQY

Query:  Y------------------------ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPL
        Y                         L +++  +K YMYINGPGGD            SL SPVATHCVG AYN+AAFLLAAGEK       GNR AMPL
Subjt:  Y------------------------ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPL

Query:  SRIALQPPSGAARGQ--------------------------------IIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD
        SRIALQ P+G+ARGQ                                I KD++R+K F AQ+ALDYGLIDRI RPPRIKADAPRKD
Subjt:  SRIALQPPSGAARGQ--------------------------------IIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD

A0A6J1DZ88 ATP-dependent Clp protease proteolytic subunit7.3e-5650Show/hide
Query:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLA----------------IKFWPQY
        MAVSS+ CLQPQI VSQP LS ATK++SGLKLQSA PFGGAKPN+T EF GKVHKSL +   N+ ++  +  M  +                 +  W   
Subjt:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLA----------------IKFWPQY

Query:  Y------------------------ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPL
        Y                         L +++  KKLYMYINGPGGD            SL+SPVATHCVG AYNLAAFLLAAGEK       GNR AMPL
Subjt:  Y------------------------ILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPL

Query:  SRIALQPPSGAARGQ--------------------------------IIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD
        SRIALQ P+GAARGQ                                I KD++RMKRF AQ+ALDYGLIDRIVRPPRIKADAPRKD
Subjt:  SRIALQPPSGAARGQ--------------------------------IIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD

A0A6J1H153 ATP-dependent Clp protease proteolytic subunit4.6e-5047.2Show/hide
Query:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSS---------------------------------
        MA SS  C QPQI  SQ  LS ATKV+SGLKLQSASPFGGAKPN+T EF GKVHKSLQ+S  N+ +S                                 
Subjt:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSS---------------------------------

Query:  -------LGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPL
               +G+ + +  + +       L +++  K LYMYINGPGGD            SL+S V THCVG AY+LAAFLLAAGEK       G+R+AMPL
Subjt:  -------LGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPL

Query:  SRIALQPPSGAARG--------------------------------QIIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD
        SRIALQ P GAARG                                QI KD++RMKRF AQ AL+YGLIDRIVRP RIKADAPRKD
Subjt:  SRIALQPPSGAARG--------------------------------QIIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD

A0A6J1JZK9 ATP-dependent Clp protease proteolytic subunit1.3e-4946.5Show/hide
Query:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSS---------------------------------
        MA SS  C QPQI  SQ  +S ATKV+SGLKLQSASPFGGAKPN+T EF GKVHKSLQ+S  N+ +S                                 
Subjt:  MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSS---------------------------------

Query:  -------LGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPL
               +G+ + +  + +       L +++  K LYMY+NGPGGD            SL+S V THCVG AY+LAAFLLAAGEK       G+R+AMPL
Subjt:  -------LGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPL

Query:  SRIALQPPSGAARG--------------------------------QIIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD
        SRIALQ P GAARG                                QI KD++RMKRF AQ AL+YGLIDRIVRP RIKADAPRKD
Subjt:  SRIALQPPSGAARG--------------------------------QIIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD

SwissProt top hitse value%identityAlignment
A1BI15 ATP-dependent Clp protease proteolytic subunit9.9e-1026.96Show/hide
Query:  ATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKS---LQASIENELSSLGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGG---------DSLQ-
        A K++SG   Q  +   G+   +  E  G+  ++       +   +  LG  + + +A     Q   L +    + +Y+Y+N PGG         D++Q 
Subjt:  ATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKS---LQASIENELSSLGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGG---------DSLQ-

Query:  --SPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARG--------------------------------QIIKDMNRMKRFT
            V+T CVG A ++ AFLLA+G K       G R+++P SRI +  PSG A+G                                Q+ +D  R +   
Subjt:  --SPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARG--------------------------------QIIKDMNRMKRFT

Query:  AQQALDYGLIDRIVRPPRIKADAPRKDPES
        AQ+AL+YG+ID+I      K   P K+ ES
Subjt:  AQQALDYGLIDRIVRPPRIKADAPRKDPES

B9DJL4 ATP-dependent Clp protease proteolytic subunit9.9e-1027.08Show/hide
Query:  TTEFDGKVHKSLQASIENELSSLGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGG---------DSLQ---SPVATHCVGCAYNLAAFLLAAGEK
        TT    + +      +++ +  LG  +  ++A     Q   L A    K +Y+YIN PGG         D++Q     V T C+G A ++ +FLLAAG K
Subjt:  TTEFDGKVHKSLQASIENELSSLGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGG---------DSLQ---SPVATHCVGCAYNLAAFLLAAGEK

Query:  VNTSICIGNRSAMPLSRIALQPPSGAARG--------------------------------QIIKDMNRMKRFTAQQALDYGLIDRIVRPPR
               G R A+P + + +  P G A+G                                QI KD +R    TA +A +YGLID +++P +
Subjt:  VNTSICIGNRSAMPLSRIALQPPSGAARG--------------------------------QIIKDMNRMKRFTAQQALDYGLIDRIVRPPR

Q3MDK7 ATP-dependent Clp protease proteolytic subunit 25.2e-1133.73Show/hide
Query:  LGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGG---------DSLQ---SPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQP
        LGR +   +A +       L +    K +Y+YIN PGG         D++Q   S V T CVG A ++ +FLLAAG K       G R A+P SRI +  
Subjt:  LGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGG---------DSLQ---SPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQP

Query:  PSGAARGQ--------------------------------IIKDMNRMKRFTAQQALDYGLIDRIV
        PSG  RGQ                                I KDM+R    +AQ+A +YGLIDR++
Subjt:  PSGAARGQ--------------------------------IIKDMNRMKRFTAQQALDYGLIDRIV

Q8YP43 Probable ATP-dependent Clp protease proteolytic subunit 31.4e-1133.73Show/hide
Query:  LGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGG---------DSLQ---SPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQP
        LGR +   +A +       L +    K +Y+YIN PGG         D++Q   S V T CVG A ++ +FLLAAG K       G R A+P SRI +  
Subjt:  LGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGG---------DSLQ---SPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQP

Query:  PSGAARGQ--------------------------------IIKDMNRMKRFTAQQALDYGLIDRIV
        PSG  RGQ                                I KDM+R    +AQ+A++YGLIDR++
Subjt:  PSGAARGQ--------------------------------IIKDMNRMKRFTAQQALDYGLIDRIV

Q9XJ36 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic6.2e-3638.52Show/hide
Query:  QPSL--SVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQ--------------------------------------ASIENELSSLGRTLMKSL
        QPSL  S + K++SGLK QSAS       N+  EF G+V+KSLQ                                      A     +  +G+ + +  
Subjt:  QPSL--SVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQ--------------------------------------ASIENELSSLGRTLMKSL

Query:  AIKFWPQYYILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQ-
        + +       L  L   +++YMY+NGPGGD            SL+SPV THCVG AYNLA FLLAAGEK       G+R AMPLSRIALQ P+GAARGQ 
Subjt:  AIKFWPQYYILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQ-

Query:  -------------------------------IIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD
                                       + KD++R+KRF A++A++YGLID+IVRPPRIK DAPR+D
Subjt:  -------------------------------IIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD

Arabidopsis top hitse value%identityAlignment
AT1G12410.1 CLP protease proteolytic subunit 24.4e-3738.52Show/hide
Query:  QPSL--SVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQ--------------------------------------ASIENELSSLGRTLMKSL
        QPSL  S + K++SGLK QSAS       N+  EF G+V+KSLQ                                      A     +  +G+ + +  
Subjt:  QPSL--SVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQ--------------------------------------ASIENELSSLGRTLMKSL

Query:  AIKFWPQYYILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQ-
        + +       L  L   +++YMY+NGPGGD            SL+SPV THCVG AYNLA FLLAAGEK       G+R AMPLSRIALQ P+GAARGQ 
Subjt:  AIKFWPQYYILTALKLPKKLYMYINGPGGD------------SLQSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQ-

Query:  -------------------------------IIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD
                                       + KD++R+KRF A++A++YGLID+IVRPPRIK DAPR+D
Subjt:  -------------------------------IIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKD

AT4G17040.1 CLP protease R subunit 41.1e-0825.78Show/hide
Query:  LKLQSASPFGGAKPNITTEFDGKVHKSLQASI-----ENELSSLGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPG----GDSL------------
        L   S+ P  G    +     G  H+     +     +N +  LG +L+ S+      ++  L      K +Y+YIN  G    G+ L            
Subjt:  LKLQSASPFGGAKPNITTEFDGKVHKSLQASI-----ENELSSLGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPG----GDSL------------

Query:  ----QSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARG--------------------------------QIIKDMNRMK
            + P+ T CVG A+  AA LL AG K       GNRSA+P S I ++ P    +G                                QI  DM R K
Subjt:  ----QSPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARG--------------------------------QIIKDMNRMK

Query:  RFTAQQALDYGLIDRIVRPPRIKAD
         F+  +A++YG+ID++V   R   D
Subjt:  RFTAQQALDYGLIDRIVRPPRIKAD

AT5G23140.1 nuclear-encoded CLP protease P71.8e-0636.59Show/hide
Query:  KKLYMYINGPGG---------DSLQ---SPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQ
        K ++MY+N PGG         D++Q   SP++T C+G A ++A+ LLAAG K       G R ++P + + +  PSG   GQ
Subjt:  KKLYMYINGPGG---------DSLQ---SPVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTCTCTTCTGCTCAGTGTCTTCAACCTCAGATTAATGTTTCCCAGCCTTCTCTCAGCGTTGCGACGAAGGTTTTCTCGGGACTGAAGCTTCAATCTGCTAGTCC
ATTCGGAGGAGCAAAACCTAATATTACTACTGAATTCGATGGAAAAGTTCATAAAAGTCTACAAGCCAGTATCGAGAACGAGTTGTCTTCATTGGGCAGAACGTTGATGA
AGAGTTTAGCAATCAAATTTTGGCCACAATACTATATCTTGACAGCATTGAAACTTCCAAAAAAACTCTACATGTACATAAATGGCCCAGGTGGAGATAGTTTGCAGAGT
CCTGTAGCTACCCATTGCGTGGGTTGTGCCTATAATCTGGCAGCCTTTCTTTTAGCAGCTGGAGAAAAGGTAAATACTTCAATTTGTATTGGTAACCGCTCTGCCATGCC
TCTATCAAGAATTGCTTTGCAACCCCCTTCCGGAGCTGCACGTGGCCAGATTATCAAGGACATGAATCGAATGAAGCGATTTACTGCTCAGCAAGCTCTTGATTATGGAC
TCATAGACCGTATAGTTAGGCCACCTCGCATTAAGGCTGATGCACCTCGCAAGGATCCTGAAAGTGAGAATTTCCTAAAAAGTAAAAGATTAATTTGCAATTTTCACTCA
TTTCGTATCTATTATTGTGTCCACTTTGACCAAATTTCATATATGAAACATATTAAAAATGGTTCACATTATATCAAACTATTC
mRNA sequenceShow/hide mRNA sequence
AATTGAAAGGCTTATGGATATGGGCCTCTGAAGCCCACCGACCATCTATCGGTCTTAGCGTCTGTCATAGAATACCAAAAGGCCCGGCCTGATCCGTCGGCACTGTATCA
TCTTCTTCGGAATCAGACCCAAAAGGGGTCTTCCTCTTTCGCATTGGGTGCTCTGTTATCGAGTAGTAATGGCAGTCTCTTCTGCTCAGTGTCTTCAACCTCAGATTAAT
GTTTCCCAGCCTTCTCTCAGCGTTGCGACGAAGGTTTTCTCGGGACTGAAGCTTCAATCTGCTAGTCCATTCGGAGGAGCAAAACCTAATATTACTACTGAATTCGATGG
AAAAGTTCATAAAAGTCTACAAGCCAGTATCGAGAACGAGTTGTCTTCATTGGGCAGAACGTTGATGAAGAGTTTAGCAATCAAATTTTGGCCACAATACTATATCTTGA
CAGCATTGAAACTTCCAAAAAAACTCTACATGTACATAAATGGCCCAGGTGGAGATAGTTTGCAGAGTCCTGTAGCTACCCATTGCGTGGGTTGTGCCTATAATCTGGCA
GCCTTTCTTTTAGCAGCTGGAGAAAAGGTAAATACTTCAATTTGTATTGGTAACCGCTCTGCCATGCCTCTATCAAGAATTGCTTTGCAACCCCCTTCCGGAGCTGCACG
TGGCCAGATTATCAAGGACATGAATCGAATGAAGCGATTTACTGCTCAGCAAGCTCTTGATTATGGACTCATAGACCGTATAGTTAGGCCACCTCGCATTAAGGCTGATG
CACCTCGCAAGGATCCTGAAAGTGAGAATTTCCTAAAAAGTAAAAGATTAATTTGCAATTTTCACTCATTTCGTATCTATTATTGTGTCCACTTTGACCAAATTTCATAT
ATGAAACATATTAAAAATGGTTCACATTATATCAAACTATTC
Protein sequenceShow/hide protein sequence
MAVSSAQCLQPQINVSQPSLSVATKVFSGLKLQSASPFGGAKPNITTEFDGKVHKSLQASIENELSSLGRTLMKSLAIKFWPQYYILTALKLPKKLYMYINGPGGDSLQS
PVATHCVGCAYNLAAFLLAAGEKVNTSICIGNRSAMPLSRIALQPPSGAARGQIIKDMNRMKRFTAQQALDYGLIDRIVRPPRIKADAPRKDPESENFLKSKRLICNFHS
FRIYYCVHFDQISYMKHIKNGSHYIKLF