; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16701 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16701
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLOB domain-containing protein
Genome locationCarg_Chr16:756156..756697
RNA-Seq ExpressionCarg16701
SyntenyCarg16701
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014789.1 LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-80100Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLASNLQEAQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS
        TRAEIAFLASNLQEAQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS
Subjt:  TRAEIAFLASNLQEAQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS

XP_008439169.1 PREDICTED: LOB domain-containing protein 24-like [Cucumis melo]2.4e-6988.59Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAE+L FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLASNLQE--AQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS
        TRAEIA +ASN+QE   QL DFA QPIQGPN++GFSQIGLS+PAH FNS
Subjt:  TRAEIAFLASNLQE--AQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS

XP_022923144.1 LOB domain-containing protein 24-like [Cucurbita moschata]1.4e-7797.28Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRC SDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLP+HLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLASNLQEAQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS
        TRAEIAFLASNLQEAQ HDFA QPIQGPNTIGFSQIGLSTPAHWFNS
Subjt:  TRAEIAFLASNLQEAQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS

XP_022985104.1 LOB domain-containing protein 24-like [Cucurbita maxima]2.2e-7595.95Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLR EAAE+LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLASNL-QEAQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS
        TRAEIAFLASNL QEAQ  DFAV+PIQGPNTIGFSQIGLSTPAHWFNS
Subjt:  TRAEIAFLASNL-QEAQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS

XP_023522202.1 LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]1.1e-7797.28Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLP+HLRPEAAE+LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLASNLQEAQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS
        TRAEIAFLASNLQEAQ  DFAVQPIQGPNTIGFSQIGLSTPAHWFNS
Subjt:  TRAEIAFLASNLQEAQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS

TrEMBL top hitse value%identityAlignment
A0A0A0L9N7 LOB domain-containing protein7.6e-6987.84Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAE+L FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLASNLQE-AQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS
        TRAEIA +ASN+QE  Q  DFA +PIQGPN++GFSQIGLSTPAH FNS
Subjt:  TRAEIAFLASNLQE-AQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS

A0A0A0LLX6 LOB domain-containing protein5.3e-5476.39Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P+ LR EAAE+L+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLASNLQEAQLHDFAVQPIQGPNTIGFSQIGLSTPAHW
        TRAEIA LASN Q+AQ  DF   P   P++ G    GLSTPAH+
Subjt:  TRAEIAFLASNLQEAQLHDFAVQPIQGPNTIGFSQIGLSTPAHW

A0A1S3AY36 LOB domain-containing protein 24-like1.2e-6988.59Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAE+L FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLASNLQE--AQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS
        TRAEIA +ASN+QE   QL DFA QPIQGPN++GFSQIGLS+PAH FNS
Subjt:  TRAEIAFLASNLQE--AQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS

A0A6J1E5I6 LOB domain-containing protein 24-like6.8e-7897.28Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRC SDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLP+HLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLASNLQEAQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS
        TRAEIAFLASNLQEAQ HDFA QPIQGPNTIGFSQIGLSTPAHWFNS
Subjt:  TRAEIAFLASNLQEAQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS

A0A6J1JCD0 LOB domain-containing protein 24-like1.1e-7595.95Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLR EAAE+LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAEIAFLASNL-QEAQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS
        TRAEIAFLASNL QEAQ  DFAV+PIQGPNTIGFSQIGLSTPAHWFNS
Subjt:  TRAEIAFLASNL-QEAQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS

SwissProt top hitse value%identityAlignment
P59467 LOB domain-containing protein 231.6e-3963.79Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   R EA ESL FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE

Query:  IAFLASNLQEAQLHDF
        IA   + L +  + DF
Subjt:  IAFLASNLQEAQLHDF

P59468 LOB domain-containing protein 241.6e-3964.66Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   R EA ESL FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE

Query:  IAFLASNLQEAQLHDF
        IA   + L + Q  DF
Subjt:  IAFLASNLQEAQLHDF

Q8LBW3 LOB domain-containing protein 122.7e-3159.22Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR
        S  CA+CK LRRRC  DCIF+P+FP ++P +FAIVH+++GASNV+K L +LPVH R +A  SL FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR

Query:  AEI
        AEI
Subjt:  AEI

Q9FKZ3 LOB domain-containing protein 364.3e-2952.88Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR
        S  CAACK+LRR+C  +C+F+P+FP + PQ+FA VH+++GASNVAK L++L  + R +A  SLF+EA+ R+ DPVYGCVG+IS LQH+L      L   +
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR

Query:  AEIA
         E+A
Subjt:  AEIA

Q9SHE9 LOB domain-containing protein 49.3e-3258.25Show/hide
Query:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI
        CAACK LRRRC  DC+FSP+FP++ PQ+FA VHR++GASNV K L +LP+H R +A  S+ +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+
Subjt:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI

Query:  AFL
          L
Subjt:  AFL

Arabidopsis top hitse value%identityAlignment
AT1G31320.1 LOB domain-containing protein 46.6e-3358.25Show/hide
Query:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI
        CAACK LRRRC  DC+FSP+FP++ PQ+FA VHR++GASNV K L +LP+H R +A  S+ +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+
Subjt:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI

Query:  AFL
          L
Subjt:  AFL

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein1.9e-3259.22Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR
        S  CA+CK LRRRC  DCIF+P+FP ++P +FAIVH+++GASNV+K L +LPVH R +A  SL FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR

Query:  AEI
        AEI
Subjt:  AEI

AT3G26620.1 LOB domain-containing protein 231.1e-4063.79Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   R EA ESL FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE

Query:  IAFLASNLQEAQLHDF
        IA   + L +  + DF
Subjt:  IAFLASNLQEAQLHDF

AT3G26660.1 LOB domain-containing protein 241.1e-4064.66Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE
        RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   R EA ESL FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAE

Query:  IAFLASNLQEAQLHDF
        IA   + L + Q  DF
Subjt:  IAFLASNLQEAQLHDF

AT5G66870.1 ASYMMETRIC LEAVES 2-like 13.1e-3052.88Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR
        S  CAACK+LRR+C  +C+F+P+FP + PQ+FA VH+++GASNVAK L++L  + R +A  SLF+EA+ R+ DPVYGCVG+IS LQH+L      L   +
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTR

Query:  AEIA
         E+A
Subjt:  AEIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCTGGTCGTTGTGCAGCTTGTAAGTATTTGAGAAGAAGATGTCCTTCCGATTGCATTTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTCGCCATTGT
TCATCGAATCTATGGTGCCAGCAATGTCGCCAAATTCCTCCATCAACTCCCTGTGCATCTACGACCCGAAGCAGCAGAATCTTTGTTTTTTGAGGCAAAATGCAGAATTG
AAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCCGAGATTGCATTTCTCGCTTCC
AACCTCCAAGAAGCCCAACTACACGATTTTGCAGTTCAGCCCATTCAAGGCCCAAACACTATTGGGTTCTCTCAGATTGGGCTTTCCACTCCAGCCCATTGGTTTAATTC
ATAG
mRNA sequenceShow/hide mRNA sequence
ATGATCTCTGGTCGTTGTGCAGCTTGTAAGTATTTGAGAAGAAGATGTCCTTCCGATTGCATTTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTCGCCATTGT
TCATCGAATCTATGGTGCCAGCAATGTCGCCAAATTCCTCCATCAACTCCCTGTGCATCTACGACCCGAAGCAGCAGAATCTTTGTTTTTTGAGGCAAAATGCAGAATTG
AAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCCGAGATTGCATTTCTCGCTTCC
AACCTCCAAGAAGCCCAACTACACGATTTTGCAGTTCAGCCCATTCAAGGCCCAAACACTATTGGGTTCTCTCAGATTGGGCTTTCCACTCCAGCCCATTGGTTTAATTC
ATAG
Protein sequenceShow/hide protein sequence
MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLAS
NLQEAQLHDFAVQPIQGPNTIGFSQIGLSTPAHWFNS