| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7014796.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma] | 1.2e-81 | 100 | Show/hide |
Query: EQRKRQIHGGVINLGLGDHYVQNSRIRCYGACGDFSSADVVSWTIMIAGLGQSNHPKESLELFSKMRSLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDM
EQRKRQIHGGVINLGLGDHYVQNSRIRCYGACGDFSSADVVSWTIMIAGLGQSNHPKESLELFSKMRSLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDM
Subjt: EQRKRQIHGGVINLGLGDHYVQNSRIRCYGACGDFSSADVVSWTIMIAGLGQSNHPKESLELFSKMRSLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDM
Query: YAKCWCIEMALQIFNNMPQRNIPSLGMPCYAVWHCMELCRKH
YAKCWCIEMALQIFNNMPQRNIPSLGMPCYAVWHCMELCRKH
Subjt: YAKCWCIEMALQIFNNMPQRNIPSLGMPCYAVWHCMELCRKH
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| XP_011648658.1 pentatricopeptide repeat-containing protein At4g38010 isoform X3 [Cucumis sativus] | 9.6e-31 | 38.52 | Show/hide |
Query: RQIHGGVINLG-LGDHYVQNSRIRCYGACGDFSSA-----------------------------------------------------------------
RQ+HG V+ LG L DHYVQNS IRCYGACGDFS A
Subjt: RQIHGGVINLG-LGDHYVQNSRIRCYGACGDFSSA-----------------------------------------------------------------
Query: ------------------------------------------DVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTW
D+VSWTIMI GL QS+HPK+SLELFS MR SLG+L FGTW
Subjt: ------------------------------------------DVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTW
Query: VHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRN
VHEYI+QRGIKW+I IGTAIVDMYAKC CIEMAL+IF +M QRN
Subjt: VHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRN
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| XP_022141237.1 pentatricopeptide repeat-containing protein At4g38010 [Momordica charantia] | 1.1e-31 | 58.02 | Show/hide |
Query: VINLGLGDHYVQNSRI-RCYGACGDFSSADVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTWVHEYIDQRGIKWN
V+ + D YV+N + D D+VSWTI+I GL QSNHP+ESLELFS M+ SLG+L FGTWVHEYIDQRGIKW+
Subjt: VINLGLGDHYVQNSRI-RCYGACGDFSSADVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTWVHEYIDQRGIKWN
Query: IRIGTAIVDMYAKCWCIEMALQIFNNMPQRN
I IGTA+VDMYAKC CIEMALQIFNNMPQRN
Subjt: IRIGTAIVDMYAKCWCIEMALQIFNNMPQRN
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| XP_022984447.1 pentatricopeptide repeat-containing protein At4g38010-like [Cucurbita maxima] | 7.8e-33 | 74.51 | Show/hide |
Query: DVVSWTIMIAGLGQSNHPKESLELFSKM-------------------RSLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQ
DVVSWTIMIAGLGQSNHPKESLELFSK+ SLG+LGFGT VHEYIDQRGIKW+I IGTAIVDMYAKC CIEMALQIFNNMPQ
Subjt: DVVSWTIMIAGLGQSNHPKESLELFSKM-------------------RSLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQ
Query: RN
RN
Subjt: RN
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| XP_031736963.1 pentatricopeptide repeat-containing protein At4g38010 isoform X1 [Cucumis sativus] | 9.6e-31 | 38.52 | Show/hide |
Query: RQIHGGVINLG-LGDHYVQNSRIRCYGACGDFSSA-----------------------------------------------------------------
RQ+HG V+ LG L DHYVQNS IRCYGACGDFS A
Subjt: RQIHGGVINLG-LGDHYVQNSRIRCYGACGDFSSA-----------------------------------------------------------------
Query: ------------------------------------------DVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTW
D+VSWTIMI GL QS+HPK+SLELFS MR SLG+L FGTW
Subjt: ------------------------------------------DVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTW
Query: VHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRN
VHEYI+QRGIKW+I IGTAIVDMYAKC CIEMAL+IF +M QRN
Subjt: VHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LF19 Uncharacterized protein | 4.6e-31 | 38.52 | Show/hide |
Query: RQIHGGVINLG-LGDHYVQNSRIRCYGACGDFSSA-----------------------------------------------------------------
RQ+HG V+ LG L DHYVQNS IRCYGACGDFS A
Subjt: RQIHGGVINLG-LGDHYVQNSRIRCYGACGDFSSA-----------------------------------------------------------------
Query: ------------------------------------------DVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTW
D+VSWTIMI GL QS+HPK+SLELFS MR SLG+L FGTW
Subjt: ------------------------------------------DVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTW
Query: VHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRN
VHEYI+QRGIKW+I IGTAIVDMYAKC CIEMAL+IF +M QRN
Subjt: VHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRN
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| A0A6J1CJB3 pentatricopeptide repeat-containing protein At4g38010 | 5.5e-32 | 58.02 | Show/hide |
Query: VINLGLGDHYVQNSRI-RCYGACGDFSSADVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTWVHEYIDQRGIKWN
V+ + D YV+N + D D+VSWTI+I GL QSNHP+ESLELFS M+ SLG+L FGTWVHEYIDQRGIKW+
Subjt: VINLGLGDHYVQNSRI-RCYGACGDFSSADVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTWVHEYIDQRGIKWN
Query: IRIGTAIVDMYAKCWCIEMALQIFNNMPQRN
I IGTA+VDMYAKC CIEMALQIFNNMPQRN
Subjt: IRIGTAIVDMYAKCWCIEMALQIFNNMPQRN
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| A0A6J1FZR9 pentatricopeptide repeat-containing protein At4g38010 isoform X1 | 7.9e-31 | 65.42 | Show/hide |
Query: DFSSADVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIF
+ + D+VSWTIMI GL QSNHPKESLELF MR SLG+L +GTWVHEYIDQRGIKW+I IGTAIVDMYAKC C+EMA QIF
Subjt: DFSSADVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIF
Query: NNMPQRN
NNMPQRN
Subjt: NNMPQRN
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| A0A6J1FZV4 pentatricopeptide repeat-containing protein At4g38010 isoform X2 | 7.9e-31 | 65.42 | Show/hide |
Query: DFSSADVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIF
+ + D+VSWTIMI GL QSNHPKESLELF MR SLG+L +GTWVHEYIDQRGIKW+I IGTAIVDMYAKC C+EMA QIF
Subjt: DFSSADVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIF
Query: NNMPQRN
NNMPQRN
Subjt: NNMPQRN
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| A0A6J1J274 pentatricopeptide repeat-containing protein At4g38010-like | 3.8e-33 | 74.51 | Show/hide |
Query: DVVSWTIMIAGLGQSNHPKESLELFSKM-------------------RSLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQ
DVVSWTIMIAGLGQSNHPKESLELFSK+ SLG+LGFGT VHEYIDQRGIKW+I IGTAIVDMYAKC CIEMALQIFNNMPQ
Subjt: DVVSWTIMIAGLGQSNHPKESLELFSKM-------------------RSLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQ
Query: RN
RN
Subjt: RN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O82380 Pentatricopeptide repeat-containing protein At2g29760, chloroplastic | 4.1e-16 | 34.01 | Show/hide |
Query: RQIHGGVINLGLG-DHYVQNSRIRCYGACGDFSSA----------DVVSWTIMIAGLGQSNHPKESLELFSKMRS-------------------LGSLGF
+ +HG + +G D +V NS I CY +CGD SA DVVSW MI G Q P ++LELF KM S + +L F
Subjt: RQIHGGVINLGLG-DHYVQNSRIRCYGACGDFSSA----------DVVSWTIMIAGLGQSNHPKESLELFSKMRS-------------------LGSLGF
Query: GTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRN
G V YI++ + N+ + A++DMY KC IE A ++F+ M +++
Subjt: GTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRN
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| P93011 Pentatricopeptide repeat-containing protein At2g33760 | 1.3e-14 | 27.08 | Show/hide |
Query: HGGVINLGLGDHYVQNSRIRCYGACGDFSSA----------DVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTWV
H V GL D YVQ + + Y CGD A +V+W +++G Q+ E++++F +MR G++ G+WV
Subjt: HGGVINLGLGDHYVQNSRIRCYGACGDFSSA----------DVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTWV
Query: HEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRNI
H+YI G+ N+++GTA++++Y++C + A ++F+ M + N+
Subjt: HEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRNI
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| Q7Y211 Pentatricopeptide repeat-containing protein At3g57430, chloroplastic | 1.3e-14 | 29.19 | Show/hide |
Query: RKRQIHGGVINLGLG-DHYVQNSRIRCYGACGDFSSA----------DVVSWTIMIAGLGQSNHPKESLELFSKMR------------------------
RK IHG V+ GL D +VQN+ + Y G A D+V+W MI G S H +++L L KM+
Subjt: RKRQIHGGVINLGLG-DHYVQNSRIRCYGACGDFSSA----------DVVSWTIMIAGLGQSNHPKESLELFSKMR------------------------
Query: ------SLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRNI
+L +L G +H Y + + ++ +G+A+VDMYAKC C++M+ ++F+ +PQ+N+
Subjt: ------SLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRNI
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| Q9MA50 Pentatricopeptide repeat-containing protein At1g05750, chloroplastic | 2.2e-14 | 33.33 | Show/hide |
Query: DVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQ
D++SWT MI G + + +E+L F +M+ +LG+L FG WVH Y+ + K N+R+ +++D+Y +C C+E A Q+F NM +
Subjt: DVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQ
Query: RNIPS
R + S
Subjt: RNIPS
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| Q9SZK1 Pentatricopeptide repeat-containing protein At4g38010 | 5.1e-19 | 44.55 | Show/hide |
Query: GDFSSADVVSWTIMIAGLGQSNHPKESLELFSKMR--------------------SLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQ
G+ D VSW MI+GL KE+++LFS M+ SLG++ G WVHEYI GIKW+ IGTAIVDMYAKC IE AL+
Subjt: GDFSSADVVSWTIMIAGLGQSNHPKESLELFSKMR--------------------SLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQ
Query: IFNNMPQRNI
IFN + +N+
Subjt: IFNNMPQRNI
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G05750.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 1.6e-15 | 33.33 | Show/hide |
Query: DVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQ
D++SWT MI G + + +E+L F +M+ +LG+L FG WVH Y+ + K N+R+ +++D+Y +C C+E A Q+F NM +
Subjt: DVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQ
Query: RNIPS
R + S
Subjt: RNIPS
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| AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 2.9e-17 | 34.01 | Show/hide |
Query: RQIHGGVINLGLG-DHYVQNSRIRCYGACGDFSSA----------DVVSWTIMIAGLGQSNHPKESLELFSKMRS-------------------LGSLGF
+ +HG + +G D +V NS I CY +CGD SA DVVSW MI G Q P ++LELF KM S + +L F
Subjt: RQIHGGVINLGLG-DHYVQNSRIRCYGACGDFSSA----------DVVSWTIMIAGLGQSNHPKESLELFSKMRS-------------------LGSLGF
Query: GTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRN
G V YI++ + N+ + A++DMY KC IE A ++F+ M +++
Subjt: GTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRN
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| AT2G33760.1 Pentatricopeptide repeat (PPR) superfamily protein | 9.3e-16 | 27.08 | Show/hide |
Query: HGGVINLGLGDHYVQNSRIRCYGACGDFSSA----------DVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTWV
H V GL D YVQ + + Y CGD A +V+W +++G Q+ E++++F +MR G++ G+WV
Subjt: HGGVINLGLGDHYVQNSRIRCYGACGDFSSA----------DVVSWTIMIAGLGQSNHPKESLELFSKMR-------------------SLGSLGFGTWV
Query: HEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRNI
H+YI G+ N+++GTA++++Y++C + A ++F+ M + N+
Subjt: HEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRNI
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| AT3G57430.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 9.3e-16 | 29.19 | Show/hide |
Query: RKRQIHGGVINLGLG-DHYVQNSRIRCYGACGDFSSA----------DVVSWTIMIAGLGQSNHPKESLELFSKMR------------------------
RK IHG V+ GL D +VQN+ + Y G A D+V+W MI G S H +++L L KM+
Subjt: RKRQIHGGVINLGLG-DHYVQNSRIRCYGACGDFSSA----------DVVSWTIMIAGLGQSNHPKESLELFSKMR------------------------
Query: ------SLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRNI
+L +L G +H Y + + ++ +G+A+VDMYAKC C++M+ ++F+ +PQ+N+
Subjt: ------SLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQIFNNMPQRNI
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| AT4G38010.1 Pentatricopeptide repeat (PPR-like) superfamily protein | 3.6e-20 | 44.55 | Show/hide |
Query: GDFSSADVVSWTIMIAGLGQSNHPKESLELFSKMR--------------------SLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQ
G+ D VSW MI+GL KE+++LFS M+ SLG++ G WVHEYI GIKW+ IGTAIVDMYAKC IE AL+
Subjt: GDFSSADVVSWTIMIAGLGQSNHPKESLELFSKMR--------------------SLGSLGFGTWVHEYIDQRGIKWNIRIGTAIVDMYAKCWCIEMALQ
Query: IFNNMPQRNI
IFN + +N+
Subjt: IFNNMPQRNI
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