; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16735 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16735
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCarg_Chr16:916465..925393
RNA-Seq ExpressionCarg16735
SyntenyCarg16735
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014823.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-192100Show/hide
Query:  MMRLGPPGIAFYLSRLPVLAQFLFSVLSFALPYVIFRSPKLPEFIAEMIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIR
        MMRLGPPGIAFYLSRLPVLAQFLFSVLSFALPYVIFRSPKLPEFIAEMIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIR
Subjt:  MMRLGPPGIAFYLSRLPVLAQFLFSVLSFALPYVIFRSPKLPEFIAEMIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIR

Query:  RGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFCRQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSMYCQEGKVDFALTILNSMVS
        RGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFCRQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSMYCQEGKVDFALTILNSMVS
Subjt:  RGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFCRQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSMYCQEGKVDFALTILNSMVS

Query:  CNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALALHMFICSCLTLARSLSATLSHGNLGI
        CNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALALHMFICSCLTLARSLSATLSHGNLGI
Subjt:  CNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALALHMFICSCLTLARSLSATLSHGNLGI

Query:  CNRKNVENLFSKWSEWDLCLATITALQMKFLTVKGDTSIELLVTR
        CNRKNVENLFSKWSEWDLCLATITALQMKFLTVKGDTSIELLVTR
Subjt:  CNRKNVENLFSKWSEWDLCLATITALQMKFLTVKGDTSIELLVTR

XP_022922745.1 pentatricopeptide repeat-containing protein At5g62370 isoform X1 [Cucurbita moschata]4.5e-7467.97Show/hide
Query:  MIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFC
        MIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVF 
Subjt:  MIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFC

Query:  RQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKM
        RQLVYSRPQLAELLYDKKFTF GAEPDASVLDSM   +C+ GK + AL   N ++S N+ PS   +  +   L   +R+ E           A   F ++
Subjt:  RQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKM

Query:  NVDGCIPDEVAYNTLLKGLSQGGRLSDALAL
        N  G       +N L+ GL   G + +AL L
Subjt:  NVDGCIPDEVAYNTLLKGLSQGGRLSDALAL

XP_022985467.1 pentatricopeptide repeat-containing protein At5g62370 isoform X1 [Cucurbita maxima]2.0e-7467.53Show/hide
Query:  MIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFC
        MIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLV+QLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDL THGV C
Subjt:  MIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFC

Query:  RQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKM
        RQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM   +C+ GK + AL   N ++S N+ PS   +  +   L   +R+ E           A   F ++
Subjt:  RQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKM

Query:  NVDGCIPDEVAYNTLLKGLSQGGRLSDALAL
        N  G       +N L+ GL   G + +AL L
Subjt:  NVDGCIPDEVAYNTLLKGLSQGGRLSDALAL

XP_023552131.1 pentatricopeptide repeat-containing protein At5g62370 [Cucurbita pepo subsp. pepo]1.4e-7567.97Show/hide
Query:  MIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFC
        MIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVE+LIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLE+DLDTHGVFC
Subjt:  MIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFC

Query:  RQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKM
        RQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM   +C+ GK + AL   N ++S N+ PS   +  +   L   +R+ E           A   F ++
Subjt:  RQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKM

Query:  NVDGCIPDEVAYNTLLKGLSQGGRLSDALAL
        N  G       +N L+ GL   G + +AL L
Subjt:  NVDGCIPDEVAYNTLLKGLSQGGRLSDALAL

XP_038882384.1 pentatricopeptide repeat-containing protein At5g62370 [Benincasa hispida]7.9e-6358.87Show/hide
Query:  MIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFC
        MIRGR C YYLSV FRNLVTTCTVPLD P TSSSSSAS+HK LC+SLVEQLIRRGLFL AQQVIQRIVTQSSSISEAIS++DFAAERGLELDL THG  C
Subjt:  MIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFC

Query:  RQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKM
        RQ VYS+PQLAELLY++ F FGGAEPD  ++DSM   +C+ GK + ALT  N ++S N+ PS   +  +   L   +R+ E           A   F ++
Subjt:  RQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKM

Query:  NVDGCIPDEVAYNTLLKGLSQGGRLSDALAL
        N  G       +N L+ GL   G + +AL L
Subjt:  NVDGCIPDEVAYNTLLKGLSQGGRLSDALAL

TrEMBL top hitse value%identityAlignment
A0A0A0LB22 Uncharacterized protein8.0e-6158.19Show/hide
Query:  MIRGRP-CKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVF
        MIRGRP CKYYLS+NFRNLVTTCTVPLDPP TSS SSASEHK LC+SLVEQLIRRG F  AQQVIQRIVTQSSSISEAISIV+FAAE GLELDL THG+ 
Subjt:  MIRGRP-CKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVF

Query:  CRQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNK
        CRQLV+S+PQL+E LY++KF  GGAEPD  +LDSM   +C+ GK + AL+  N ++S N+ PS   +  +   L    R+ E           A   F +
Subjt:  CRQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNK

Query:  MNVDGCIPDEVAYNTLLKGLSQGGRLSDALAL
        +N  G       +N L+ GL   G + +AL L
Subjt:  MNVDGCIPDEVAYNTLLKGLSQGGRLSDALAL

A0A1S4DTI6 pentatricopeptide repeat-containing protein At5g623705.5e-6259.05Show/hide
Query:  MIRGRP-CKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVF
        MIRGRP CKYYLS+NFRNLVTTCTVPLDPP TSS SSASEHK LC+SLVEQLIRRGLF  AQQVIQRIVTQSSSISEAISIV+FAAE GLELDL THG+ 
Subjt:  MIRGRP-CKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVF

Query:  CRQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNK
        CRQLVYS+PQL+E LY++KF  GGAEPD  +LDSM   +C+ GK + AL+  N ++S N+ PS   +  +   L   +R+ E           A   F +
Subjt:  CRQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNK

Query:  MNVDGCIPDEVAYNTLLKGLSQGGRLSDALAL
        +N  G       +N L+ GL   G + +AL L
Subjt:  MNVDGCIPDEVAYNTLLKGLSQGGRLSDALAL

A0A5A7VHW5 Pentatricopeptide repeat-containing protein5.5e-6259.05Show/hide
Query:  MIRGRP-CKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVF
        MIRGRP CKYYLS+NFRNLVTTCTVPLDPP TSS SSASEHK LC+SLVEQLIRRGLF  AQQVIQRIVTQSSSISEAISIV+FAAE GLELDL THG+ 
Subjt:  MIRGRP-CKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVF

Query:  CRQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNK
        CRQLVYS+PQL+E LY++KF  GGAEPD  +LDSM   +C+ GK + AL+  N ++S N+ PS   +  +   L   +R+ E           A   F +
Subjt:  CRQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNK

Query:  MNVDGCIPDEVAYNTLLKGLSQGGRLSDALAL
        +N  G       +N L+ GL   G + +AL L
Subjt:  MNVDGCIPDEVAYNTLLKGLSQGGRLSDALAL

A0A6J1E4Z0 pentatricopeptide repeat-containing protein At5g62370 isoform X12.2e-7467.97Show/hide
Query:  MIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFC
        MIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVF 
Subjt:  MIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFC

Query:  RQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKM
        RQLVYSRPQLAELLYDKKFTF GAEPDASVLDSM   +C+ GK + AL   N ++S N+ PS   +  +   L   +R+ E           A   F ++
Subjt:  RQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKM

Query:  NVDGCIPDEVAYNTLLKGLSQGGRLSDALAL
        N  G       +N L+ GL   G + +AL L
Subjt:  NVDGCIPDEVAYNTLLKGLSQGGRLSDALAL

A0A6J1J4Z3 pentatricopeptide repeat-containing protein At5g62370 isoform X19.7e-7567.53Show/hide
Query:  MIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFC
        MIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLV+QLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDL THGV C
Subjt:  MIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFC

Query:  RQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKM
        RQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM   +C+ GK + AL   N ++S N+ PS   +  +   L   +R+ E           A   F ++
Subjt:  RQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKM

Query:  NVDGCIPDEVAYNTLLKGLSQGGRLSDALAL
        N  G       +N L+ GL   G + +AL L
Subjt:  NVDGCIPDEVAYNTLLKGLSQGGRLSDALAL

SwissProt top hitse value%identityAlignment
Q9CA58 Putative pentatricopeptide repeat-containing protein At1g745801.8e-0928.72Show/hide
Query:  CYSLVEQLIRRGLF--LPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFCRQLVY-----SRPQLAELLYDKKFTFGGAEPDASVLDSM--
        C  L++++I+RG+   L    +  + + Q   +  A+ +V    E+G + D+ T+      L+Y     S+ Q AE +Y  K    G EPD+   +++  
Subjt:  CYSLVEQLIRRGLF--LPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFCRQLVY-----SRPQLAELLYDKKFTFGGAEPDASVLDSM--

Query:  -YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALAL
         YC+ G V  A  I+   V   F P    Y  LI+ L  +            + N A+ LFN+    G  P+ + YNTL+KGLS  G + +A  L
Subjt:  -YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALAL

Q9CAN0 Pentatricopeptide repeat-containing protein At1g63130, mitochondrial2.3e-0930.67Show/hide
Query:  ISEAISIVDFAAERGLELDLDT-----HGVFCRQLVYSRPQLAELLYDKKFTFGGAEPDA---SVLDSMYCQEGKVDFALTILNSMVSCNFSPSLHCYTV
        IS+A+S+V    E G + D  T     HG+F     ++R   A  L D +    G +PD     ++ +  C+ G +D AL++L  M      P +  Y  
Subjt:  ISEAISIVDFAAERGLELDLDT-----HGVFCRQLVYSRPQLAELLYDKKFTFGGAEPDA---SVLDSMYCQEGKVDFALTILNSMVSCNFSPSLHCYTV

Query:  LINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALAL
        +I+AL               +VN A+ LF +M+  G  P+ V YN+L++ L   GR SDA  L
Subjt:  LINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALAL

Q9FIX3 Pentatricopeptide repeat-containing protein At5g397104.7e-1029.24Show/hide
Query:  VIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFCRQLVYS-RPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSP
        V+   +    +IS A ++     E  +  ++ T+ +  R   ++    +A  L+DK  T  G  P+    +++   YC+  K+D    +L SM      P
Subjt:  VIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFCRQLVYS-RPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSP

Query:  SLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALALH
        +L  Y V+IN L R+ R++EVS +L            +MN  G   DEV YNTL+KG  + G    AL +H
Subjt:  SLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALALH

Q9LMY5 Putative pentatricopeptide repeat-containing protein At1g136301.1e-0927.03Show/hide
Query:  SISEAISIVDFAAERGLELDLDTHGVFCR-----QLVYSRPQLAELLYDKKFTFGGAEPDA---SVLDSMYCQEGKVDFALTILNSMVSCNFS-PSLHCY
        SI+EA+ +     + G+E D  T+ +  +      ++    ++   + DK     G  PD    ++L    CQ G +D  L +L  M+S  F   S+   
Subjt:  SISEAISIVDFAAERGLELDLDTHGVFCR-----QLVYSRPQLAELLYDKKFTFGGAEPDA---SVLDSMYCQEGKVDFALTILNSMVSCNFS-PSLHCY

Query:  TVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALALHMFICSCLTLARSLSATLSHGN--LGICN------
        +V+++ L +  R++E           A+ LFN+M  DG  PD VAY+ ++ GL + G+   AL L+  +C      R L  + +HG   LG+C       
Subjt:  TVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALALHMFICSCLTLARSLSATLSHGN--LGICN------

Query:  -RKNVENLFSKWSEWDLCLATI
         R  +++L S     D+ L  I
Subjt:  -RKNVENLFSKWSEWDLCLATI

Q9LVA2 Pentatricopeptide repeat-containing protein At5g623703.9e-2031.53Show/hide
Query:  TTCTVPLDP-PVTSS---SSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFCRQLV-YSRPQLAELL
        TTC +  +  P TS+   S+++ +H++ C SL+ +L RRGL   A++VI+R++  SSSISEA  + DFA + G+ELD   +G   R+L    +P +AE  
Subjt:  TTCTVPLDP-PVTSS---SSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFCRQLV-YSRPQLAELL

Query:  YDKKFTFGGAEPDASVLDSM-YC--QEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNT
        Y+++    G  PD+SVLDSM +C  +  + D A   L+ +++  ++PS +  +++++ L   DR  E             GL+                 
Subjt:  YDKKFTFGGAEPDASVLDSM-YC--QEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNT

Query:  LLKGLSQGGRLSDALALHMFIC
        L KGL   G L++A+ +   +C
Subjt:  LLKGLSQGGRLSDALALHMFIC

Arabidopsis top hitse value%identityAlignment
AT1G13630.1 Tetratricopeptide repeat (TPR)-like superfamily protein7.5e-1127.03Show/hide
Query:  SISEAISIVDFAAERGLELDLDTHGVFCR-----QLVYSRPQLAELLYDKKFTFGGAEPDA---SVLDSMYCQEGKVDFALTILNSMVSCNFS-PSLHCY
        SI+EA+ +     + G+E D  T+ +  +      ++    ++   + DK     G  PD    ++L    CQ G +D  L +L  M+S  F   S+   
Subjt:  SISEAISIVDFAAERGLELDLDTHGVFCR-----QLVYSRPQLAELLYDKKFTFGGAEPDA---SVLDSMYCQEGKVDFALTILNSMVSCNFS-PSLHCY

Query:  TVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALALHMFICSCLTLARSLSATLSHGN--LGICN------
        +V+++ L +  R++E           A+ LFN+M  DG  PD VAY+ ++ GL + G+   AL L+  +C      R L  + +HG   LG+C       
Subjt:  TVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALALHMFICSCLTLARSLSATLSHGN--LGICN------

Query:  -RKNVENLFSKWSEWDLCLATI
         R  +++L S     D+ L  I
Subjt:  -RKNVENLFSKWSEWDLCLATI

AT1G13630.2 Tetratricopeptide repeat (TPR)-like superfamily protein7.5e-1127.03Show/hide
Query:  SISEAISIVDFAAERGLELDLDTHGVFCR-----QLVYSRPQLAELLYDKKFTFGGAEPDA---SVLDSMYCQEGKVDFALTILNSMVSCNFS-PSLHCY
        SI+EA+ +     + G+E D  T+ +  +      ++    ++   + DK     G  PD    ++L    CQ G +D  L +L  M+S  F   S+   
Subjt:  SISEAISIVDFAAERGLELDLDTHGVFCR-----QLVYSRPQLAELLYDKKFTFGGAEPDA---SVLDSMYCQEGKVDFALTILNSMVSCNFS-PSLHCY

Query:  TVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALALHMFICSCLTLARSLSATLSHGN--LGICN------
        +V+++ L +  R++E           A+ LFN+M  DG  PD VAY+ ++ GL + G+   AL L+  +C      R L  + +HG   LG+C       
Subjt:  TVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALALHMFICSCLTLARSLSATLSHGN--LGICN------

Query:  -RKNVENLFSKWSEWDLCLATI
         R  +++L S     D+ L  I
Subjt:  -RKNVENLFSKWSEWDLCLATI

AT1G74580.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-1028.72Show/hide
Query:  CYSLVEQLIRRGLF--LPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFCRQLVY-----SRPQLAELLYDKKFTFGGAEPDASVLDSM--
        C  L++++I+RG+   L    +  + + Q   +  A+ +V    E+G + D+ T+      L+Y     S+ Q AE +Y  K    G EPD+   +++  
Subjt:  CYSLVEQLIRRGLF--LPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFCRQLVY-----SRPQLAELLYDKKFTFGGAEPDASVLDSM--

Query:  -YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALAL
         YC+ G V  A  I+   V   F P    Y  LI+ L  +            + N A+ LFN+    G  P+ + YNTL+KGLS  G + +A  L
Subjt:  -YCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALAL

AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.4e-1129.24Show/hide
Query:  VIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFCRQLVYS-RPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSP
        V+   +    +IS A ++     E  +  ++ T+ +  R   ++    +A  L+DK  T  G  P+    +++   YC+  K+D    +L SM      P
Subjt:  VIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFCRQLVYS-RPQLAELLYDKKFTFGGAEPDASVLDSM---YCQEGKVDFALTILNSMVSCNFSP

Query:  SLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALALH
        +L  Y V+IN L R+ R++EVS +L            +MN  G   DEV YNTL+KG  + G    AL +H
Subjt:  SLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALALH

AT5G62370.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.7e-2131.53Show/hide
Query:  TTCTVPLDP-PVTSS---SSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFCRQLV-YSRPQLAELL
        TTC +  +  P TS+   S+++ +H++ C SL+ +L RRGL   A++VI+R++  SSSISEA  + DFA + G+ELD   +G   R+L    +P +AE  
Subjt:  TTCTVPLDP-PVTSS---SSSASEHKTLCYSLVEQLIRRGLFLPAQQVIQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFCRQLV-YSRPQLAELL

Query:  YDKKFTFGGAEPDASVLDSM-YC--QEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNT
        Y+++    G  PD+SVLDSM +C  +  + D A   L+ +++  ++PS +  +++++ L   DR  E             GL+                 
Subjt:  YDKKFTFGGAEPDASVLDSM-YC--QEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRDDRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNT

Query:  LLKGLSQGGRLSDALALHMFIC
        L KGL   G L++A+ +   +C
Subjt:  LLKGLSQGGRLSDALALHMFIC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGATTAGGGCCCCCTGGTATCGCCTTCTACCTTTCGCGCCTTCCTGTTCTCGCTCAGTTTCTCTTCTCAGTTCTCAGTTTTGCTCTTCCTTATGTAATCTTCAG
GTCTCCAAAGCTGCCGGAGTTTATTGCAGAGATGATACGGGGACGGCCCTGTAAATATTACCTCTCTGTGAACTTCAGGAATCTGGTGACGACTTGTACAGTCCCACTTG
ATCCTCCAGTTACTTCGAGTTCCTCTTCTGCTAGCGAACACAAGACTTTGTGCTATTCCTTAGTGGAGCAACTAATTCGTCGTGGCTTGTTTTTGCCGGCGCAACAAGTG
ATACAACGAATTGTAACGCAATCTTCTTCAATTTCTGAAGCTATTTCTATTGTTGACTTCGCTGCTGAACGGGGTTTGGAGCTTGATTTGGATACCCATGGTGTGTTTTG
CCGGCAGCTTGTCTATTCTAGGCCCCAGTTGGCTGAACTGCTGTACGACAAAAAATTTACATTCGGAGGTGCTGAGCCAGATGCGTCAGTTTTGGACTCTATGTATTGTC
AAGAAGGGAAGGTTGACTTTGCATTAACGATTTTGAATAGTATGGTCAGCTGCAACTTTTCTCCTAGCTTGCATTGTTATACAGTTTTGATTAATGCACTGCATAGGGAT
GATAGGTTAGAAGAAGTCAGTGAATTGCTTAGGAGTGATGTTAACTCTGCCATTGGGTTGTTTAATAAGATGAATGTAGATGGGTGTATTCCAGATGAAGTTGCATACAA
CACGTTACTGAAAGGCCTTTCCCAAGGAGGGAGACTTTCTGATGCATTGGCACTCCACATGTTCATTTGTAGCTGTTTGACTTTAGCAAGATCCTTGTCTGCAACACTTT
CCCATGGAAATCTTGGAATTTGCAATAGGAAGAACGTAGAAAACCTATTCTCCAAGTGGAGTGAATGGGACCTCTGTCTGGCAACAATAACTGCCTTGCAAATGAAATTT
TTGACGGTGAAAGGCGATACCTCCATTGAATTGCTTGTAACACGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGAGATTAGGGCCCCCTGGTATCGCCTTCTACCTTTCGCGCCTTCCTGTTCTCGCTCAGTTTCTCTTCTCAGTTCTCAGTTTTGCTCTTCCTTATGTAATCTTCAG
GTCTCCAAAGCTGCCGGAGTTTATTGCAGAGATGATACGGGGACGGCCCTGTAAATATTACCTCTCTGTGAACTTCAGGAATCTGGTGACGACTTGTACAGTCCCACTTG
ATCCTCCAGTTACTTCGAGTTCCTCTTCTGCTAGCGAACACAAGACTTTGTGCTATTCCTTAGTGGAGCAACTAATTCGTCGTGGCTTGTTTTTGCCGGCGCAACAAGTG
ATACAACGAATTGTAACGCAATCTTCTTCAATTTCTGAAGCTATTTCTATTGTTGACTTCGCTGCTGAACGGGGTTTGGAGCTTGATTTGGATACCCATGGTGTGTTTTG
CCGGCAGCTTGTCTATTCTAGGCCCCAGTTGGCTGAACTGCTGTACGACAAAAAATTTACATTCGGAGGTGCTGAGCCAGATGCGTCAGTTTTGGACTCTATGTATTGTC
AAGAAGGGAAGGTTGACTTTGCATTAACGATTTTGAATAGTATGGTCAGCTGCAACTTTTCTCCTAGCTTGCATTGTTATACAGTTTTGATTAATGCACTGCATAGGGAT
GATAGGTTAGAAGAAGTCAGTGAATTGCTTAGGAGTGATGTTAACTCTGCCATTGGGTTGTTTAATAAGATGAATGTAGATGGGTGTATTCCAGATGAAGTTGCATACAA
CACGTTACTGAAAGGCCTTTCCCAAGGAGGGAGACTTTCTGATGCATTGGCACTCCACATGTTCATTTGTAGCTGTTTGACTTTAGCAAGATCCTTGTCTGCAACACTTT
CCCATGGAAATCTTGGAATTTGCAATAGGAAGAACGTAGAAAACCTATTCTCCAAGTGGAGTGAATGGGACCTCTGTCTGGCAACAATAACTGCCTTGCAAATGAAATTT
TTGACGGTGAAAGGCGATACCTCCATTGAATTGCTTGTAACACGGTAACCTTTCCAGTCATTCTCTGGCTAGTTGATGAACAAGGAGGTAAGCTTTGTGGAAAACTGTTC
GAGATTACTCCTTCCACGGCCTTCCCAAGTAGGTTTTCACTGTCTTCTCCATTTGTTTTGGTACATCTGTGGCCATGACCCTTGAATTGTGGATTGAAATGCCAGTATTC
TGACCATTCATTGACCTTTTTGTTAAATCATGCAGTTCTGTAGAATAACTGCAGCATTGCCAAATATAAAATCTACAGTGCCGTAAATATAACACTACTTATAGAGCTGT
CTTCGAAAATGGACATGAAGGGTTTCTTGATACCCTTCAAAGGCACAACGGTAGAAGACAGAAAGATCTGCGCCAGATCGGAGAGCAATTGCTTGATGGTTTCCAGGACC
AGTGGTGTTCCGGAATGTGATGCCTCGAGCTATAAATCCTTCACCTGTCACCGCTGATTGTCTCAGAGTACAAGAAAGGAGAAAAGGAGAAAATTTCAAGCACCATGCCT
TGGAATGGAAGAAAAGTAATTCTAGACGATAAAGTTGGAATGGTAGAGTTGATGGACTTGGAACGAGAAAAATATGTAGGTCGACATGTTATAATGTCATTATAATGGAG
GAAAATGAGCTTATAAGCAGTAGTCAACCCAGAGAGTCTTACCAACAGTAGCAGAATTGAAAGGGGTGGAACCTCCTCCTATGTTACCAGTAATGAAGCTTCCTCTAGAG
CCTCTCCTACTATCTTCTGGTTACCCGACCTGTCCTGAGCCACCTCAAGGTCCGACTTTGTTGACGACTGCAGTATCCTCTTGTCACCACCTAAAAGCCAACTTGGAAAG
CCCTTTTTATATGTTTCCTTCCCCAGGCCAGCTGAAGCATTGTTAATAGCCAAGCTGTTGCTTATCAGCTTTGTGACATTGTTCGATGTGATCAGCGGCAATACATAATC
CGAAACATTAAGCTCAGCAAGCCCTGTGCGGCATGTTTCAAGGTTTGTTAGGGCAGTACTGAGCCAGGCTTGGATATCAAACAAAGTACATTTAGTAGATGAATCTAGAG
CGTGGTTGAGCTGAAGGATGGTGTTTCGGTAGAGCTTCAAGCAATCAGCCAAAGCAAGCCTTTTCCTTCCCATTTTGGCACTTTGAATTGACACCCTTGGTGTGGCTTTC
GGCACTCAGGGCTCTCTCCATGGCAGATTGGATGACCTTTGGGCGCAGCCTTGCTGCCATGGTTGAAAAAGTGCTCGCAGGTTGTAGGGTATGTGGTTTTTCCACACTAC
CAATCAATGTCATTAGAGGCTTGCTTGGGAAAGGCTGGTGAAGTCAGTAAAAAGAACTAAGAAACAAGAGCATCCCGAGACTACTCTCCATTGAAAGACCAGACCTTCCT
TTCTTTGATGATGCTATGCTAGCTCACTCAGGTTTGGTTACGTGGGAAAGAAGAGACAGGTTGGCTGAGTTTGAACATGGAGAAAATAATGCAGTTTCAATGATCAAAGT
CCGAAACTTCCATTCATGTGTCAAACATATATCTGCACCAGAACTCTTAACTTCAAAAGAAGTACATGTCAATCATCGTTACACTATGTTCAACTTATAGAATTAGAATT
AAATTATTTTTTTGACATTCATGCTAGTAGTTGGACCTGTATTGAAACTATGCTCTTT
Protein sequenceShow/hide protein sequence
MMRLGPPGIAFYLSRLPVLAQFLFSVLSFALPYVIFRSPKLPEFIAEMIRGRPCKYYLSVNFRNLVTTCTVPLDPPVTSSSSSASEHKTLCYSLVEQLIRRGLFLPAQQV
IQRIVTQSSSISEAISIVDFAAERGLELDLDTHGVFCRQLVYSRPQLAELLYDKKFTFGGAEPDASVLDSMYCQEGKVDFALTILNSMVSCNFSPSLHCYTVLINALHRD
DRLEEVSELLRSDVNSAIGLFNKMNVDGCIPDEVAYNTLLKGLSQGGRLSDALALHMFICSCLTLARSLSATLSHGNLGICNRKNVENLFSKWSEWDLCLATITALQMKF
LTVKGDTSIELLVTR