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Carg16770 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16770
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationCarg_Chr16:1135670..1136167
RNA-Seq ExpressionCarg16770
SyntenyCarg16770
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016901488.1 PREDICTED: glycine-rich cell wall structural protein 2 [Cucumis melo]2.8e-5074.57Show/hide
Query:  MKKPSPFHLSPLFFLLFFITASSAVHG----RKLLNSPDMYWGSPNGG----GNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGY
        MK+PS FHLS LFFLLF +T+SS V G    RKLLN PDM WGSPNGG    GNPTG YGS H PNWDYNWGWGSSPGSGWG+GSGSGRSPTGFGKGYGY
Subjt:  MKKPSPFHLSPLFFLLFFITASSAVHG----RKLLNSPDMYWGSPNGG----GNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGY

Query:  GFGSGSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG
        GFGSGSGSGSGYGYGSG GGAHGGGYGSGSGYGNSG        GG  GGGYG  SG EY     T+DK+R G
Subjt:  GFGSGSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG

XP_022141166.1 putative glycine-rich cell wall structural protein 1 [Momordica charantia]1.6e-5078.24Show/hide
Query:  MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYW----GSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGS
        MKK S FHLS L FLLFFIT SSA  GRKLLN PDM W    G+ NGGGNP G YGSAHGPNWDYNWGWGSSPGSGWG+GSGSGRSPTGFGKGYGYGFGS
Subjt:  MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYW----GSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGS

Query:  GSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKD-KSRHG
        GSGSGSGYGYGSG GGA GGGYG GSGYGNS   G GGGY G  GGGYG S G EY  S VTKD +S+HG
Subjt:  GSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKD-KSRHG

XP_022922583.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]1.6e-77100Show/hide
Query:  MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGS
        MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGS
Subjt:  MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGS

Query:  GSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG
        GSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG
Subjt:  GSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG

XP_022984407.1 glycine-rich cell wall structural protein 2-like [Cucurbita maxima]3.9e-7698.79Show/hide
Query:  MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGS
        MKKPSPFHLSPLFFLLFFIT SSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRS TGFGKGYGYGFGSGSGS
Subjt:  MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGS

Query:  GSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG
        GSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG
Subjt:  GSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG

XP_023553046.1 keratin-associated protein 21-1-like [Cucurbita pepo subsp. pepo]3.9e-7698.79Show/hide
Query:  MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGS
        MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGS
Subjt:  MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGS

Query:  GSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG
        GSGYGYGSGGGGAHGGGYGSGSGYGNS DSGDGGGYG SSGGGYGNSSGGEYPPSAVTKDKSRHG
Subjt:  GSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG

TrEMBL top hitse value%identityAlignment
A0A1S4DZT0 glycine-rich cell wall structural protein 21.4e-5074.57Show/hide
Query:  MKKPSPFHLSPLFFLLFFITASSAVHG----RKLLNSPDMYWGSPNGG----GNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGY
        MK+PS FHLS LFFLLF +T+SS V G    RKLLN PDM WGSPNGG    GNPTG YGS H PNWDYNWGWGSSPGSGWG+GSGSGRSPTGFGKGYGY
Subjt:  MKKPSPFHLSPLFFLLFFITASSAVHG----RKLLNSPDMYWGSPNGG----GNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGY

Query:  GFGSGSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG
        GFGSGSGSGSGYGYGSG GGAHGGGYGSGSGYGNSG        GG  GGGYG  SG EY     T+DK+R G
Subjt:  GFGSGSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG

A0A5A7TRC6 Glycine-rich cell wall structural protein 21.4e-5074.57Show/hide
Query:  MKKPSPFHLSPLFFLLFFITASSAVHG----RKLLNSPDMYWGSPNGG----GNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGY
        MK+PS FHLS LFFLLF +T+SS V G    RKLLN PDM WGSPNGG    GNPTG YGS H PNWDYNWGWGSSPGSGWG+GSGSGRSPTGFGKGYGY
Subjt:  MKKPSPFHLSPLFFLLFFITASSAVHG----RKLLNSPDMYWGSPNGG----GNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGY

Query:  GFGSGSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG
        GFGSGSGSGSGYGYGSG GGAHGGGYGSGSGYGNSG        GG  GGGYG  SG EY     T+DK+R G
Subjt:  GFGSGSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG

A0A6J1CI83 putative glycine-rich cell wall structural protein 18.0e-5178.24Show/hide
Query:  MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYW----GSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGS
        MKK S FHLS L FLLFFIT SSA  GRKLLN PDM W    G+ NGGGNP G YGSAHGPNWDYNWGWGSSPGSGWG+GSGSGRSPTGFGKGYGYGFGS
Subjt:  MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYW----GSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGS

Query:  GSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKD-KSRHG
        GSGSGSGYGYGSG GGA GGGYG GSGYGNS   G GGGY G  GGGYG S G EY  S VTKD +S+HG
Subjt:  GSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKD-KSRHG

A0A6J1E737 glycine-rich cell wall structural protein 2-like7.7e-78100Show/hide
Query:  MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGS
        MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGS
Subjt:  MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGS

Query:  GSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG
        GSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG
Subjt:  GSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG

A0A6J1J236 glycine-rich cell wall structural protein 2-like1.9e-7698.79Show/hide
Query:  MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGS
        MKKPSPFHLSPLFFLLFFIT SSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRS TGFGKGYGYGFGSGSGS
Subjt:  MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGS

Query:  GSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG
        GSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG
Subjt:  GSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36120.1 Glycine-rich protein family5.5e-0448.18Show/hide
Query:  GGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGG--SS
        GGG P GGYG   G      +G G + G G G G G+G    G G  +G G+G G G+G+G GYG GG G HGGG G G+G G  G SG+GG +GG   +
Subjt:  GGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGGGGAHGGGYGSGSGYGNSGDSGDGGGYGG--SS

Query:  GGGYGNSSGG
        GGG G   GG
Subjt:  GGGYGNSSGG

AT5G61660.1 glycine-rich protein3.7e-2462.2Show/hide
Query:  LFFLLFFITASSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGGG
        L    F ITA ++V       S    W      GN  G  GS  GPNW+YNWGWGS+PGSGWGYG+GSGRSPTG+G+G GYG+GSGSGSG+GYGYGSGGG
Subjt:  LFFLLFFITASSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGGG

Query:  GAHGGGYGSGSGYGNSGDSGDGGGYGG
        GA GGGYG GSG G SG  G GGG+ G
Subjt:  GAHGGGYGSGSGYGNSGDSGDGGGYGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAACCATCACCATTTCATCTCTCTCCTCTCTTTTTTCTTCTCTTCTTCATCACAGCTTCCTCCGCCGTACACGGCCGGAAACTGCTCAACTCTCCAGACATGTA
TTGGGGATCGCCCAATGGAGGTGGGAATCCCACTGGGGGCTATGGCTCTGCCCATGGTCCTAATTGGGACTACAATTGGGGCTGGGGTTCGAGCCCTGGGAGCGGTTGGG
GTTACGGTTCGGGTTCCGGTCGCTCCCCGACTGGGTTCGGGAAGGGTTATGGATATGGATTTGGTTCGGGGTCGGGTTCGGGATCTGGATATGGGTATGGAAGTGGAGGT
GGTGGGGCTCATGGTGGTGGATATGGGTCCGGAAGTGGCTACGGTAACTCTGGCGACAGTGGCGATGGTGGCGGGTACGGTGGTTCGAGTGGCGGCGGATATGGCAATTC
GAGTGGCGGCGAGTATCCTCCGTCGGCCGTTACGAAGGACAAAAGCAGGCATGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAACCATCACCATTTCATCTCTCTCCTCTCTTTTTTCTTCTCTTCTTCATCACAGCTTCCTCCGCCGTACACGGCCGGAAACTGCTCAACTCTCCAGACATGTA
TTGGGGATCGCCCAATGGAGGTGGGAATCCCACTGGGGGCTATGGCTCTGCCCATGGTCCTAATTGGGACTACAATTGGGGCTGGGGTTCGAGCCCTGGGAGCGGTTGGG
GTTACGGTTCGGGTTCCGGTCGCTCCCCGACTGGGTTCGGGAAGGGTTATGGATATGGATTTGGTTCGGGGTCGGGTTCGGGATCTGGATATGGGTATGGAAGTGGAGGT
GGTGGGGCTCATGGTGGTGGATATGGGTCCGGAAGTGGCTACGGTAACTCTGGCGACAGTGGCGATGGTGGCGGGTACGGTGGTTCGAGTGGCGGCGGATATGGCAATTC
GAGTGGCGGCGAGTATCCTCCGTCGGCCGTTACGAAGGACAAAAGCAGGCATGGGTAG
Protein sequenceShow/hide protein sequence
MKKPSPFHLSPLFFLLFFITASSAVHGRKLLNSPDMYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGG
GGAHGGGYGSGSGYGNSGDSGDGGGYGGSSGGGYGNSSGGEYPPSAVTKDKSRHG