; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16783 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16783
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionclassical arabinogalactan protein 4
Genome locationCarg_Chr16:1198133..1198675
RNA-Seq ExpressionCarg16783
SyntenyCarg16783
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576849.1 hypothetical protein SDJN03_24423, partial [Cucurbita argyrosperma subsp. sororia]5.4e-7999.44Show/hide
Query:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAP
        MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAP
Subjt:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAP

Query:  SPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA
        SPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAI GSVAFGLMAAALIA
Subjt:  SPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA

KAG7014869.1 hypothetical protein SDJN02_22499, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-80100Show/hide
Query:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAP
        MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAP
Subjt:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAP

Query:  SPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA
        SPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA
Subjt:  SPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA

XP_022922559.1 extensin-like [Cucurbita moschata]1.5e-7696.67Show/hide
Query:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAP
        MASFAVLNVITAALLLISA+ANSPLPSPAPSPESPPWKWTPDT+SPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAP
Subjt:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAP

Query:  SPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA
        SPSKTKAPAPAPSKMS TPARAPKSSA PVSSPPAPNGEMEPPTPSVAPTAPKA+NGGAANRFAIGG+VAFGLMAAALIA
Subjt:  SPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA

XP_022985113.1 extensin-like [Cucurbita maxima]8.9e-7495.56Show/hide
Query:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAP
        MASFAVLNVITAALLLISA+ANSPLPS APSPES PWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSP DANPPTLSPAALPPAVKSPVHAP
Subjt:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAP

Query:  SPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA
        SPSKTKAPAPAPSKMSPTPARAPKSSA P SSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAI  SVAFGLMAAALIA
Subjt:  SPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA

XP_038877309.1 vegetative cell wall protein gp1-like [Benincasa hispida]3.9e-5373.16Show/hide
Query:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPP----------SPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALP
        MAS  VL V+T ALLLISAAANSP+PSPAP PESP WKWTP  E PSSPP  EPP          SP  +PPE+SP+PSS  PT PP ANPPTLSP A P
Subjt:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPP----------SPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALP

Query:  PAVKSPVHAPSPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA
        P VKSP HAPSP+KTKAPAPAPSKMSP+PA+APKSS  P SSPP+PNG MEPP PSVAP   K DNGGAANRFAIGGSVA GLM AALIA
Subjt:  PAVKSPVHAPSPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA

TrEMBL top hitse value%identityAlignment
A0A0A0L0Q7 Uncharacterized protein3.7e-4970.16Show/hide
Query:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPP-----------SPSVSPPELSPVPSSDTPTSPPDANPPTLSPAAL
        MAS  +LN++T A LLIS AANSP PSPAP+ ESP WKWTP  E PSSPP  EPP           SP  +PPELSPVP+S  PTSPP ANPPTLSP A 
Subjt:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPP-----------SPSVSPPELSPVPSSDTPTSPPDANPPTLSPAAL

Query:  PPAVKSPVHAPSPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA
        PPAVKSP HAPSP+KTKAPAPAPSK SP PA+APKSS  PVSSPP+PNG+MEPPTPSVAP   K  NG  ANRFAIGGS+A GLM AA IA
Subjt:  PPAVKSPVHAPSPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA

A0A1S3CHW9 classical arabinogalactan protein 49.6e-5069.63Show/hide
Query:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPP-----------SPSVSPPELSPVPSSDTPTSPPDANPPTLSPAAL
        MAS  +LN++T A LLISAAANSP PSPAPS ESP WKWTP  + PSSPP  EPP           SP  +PPELSPVPSS +PTSPP ANPPTLSP A 
Subjt:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPP-----------SPSVSPPELSPVPSSDTPTSPPDANPPTLSPAAL

Query:  PPAVKSPVHAPSPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA
        PPAV SP HAPSP+KTKAPAPAPSK+SP PA+APKSS  PVSSPP+PNG+MEPPTPS AP   K  NG  ANRFAIGGS+A G M AA IA
Subjt:  PPAVKSPVHAPSPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA

A0A5A7V3Q7 Classical arabinogalactan protein 49.6e-5069.63Show/hide
Query:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPP-----------SPSVSPPELSPVPSSDTPTSPPDANPPTLSPAAL
        MAS  +LN++T A LLISAAANSP PSPAPS ESP WKWTP  + PSSPP  EPP           SP  +PPELSPVPSS +PTSPP ANPPTLSP A 
Subjt:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPP-----------SPSVSPPELSPVPSSDTPTSPPDANPPTLSPAAL

Query:  PPAVKSPVHAPSPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA
        PPAV SP HAPSP+KTKAPAPAPSK+SP PA+APKSS  PVSSPP+PNG+MEPPTPS AP   K  NG  ANRFAIGGS+A G M AA IA
Subjt:  PPAVKSPVHAPSPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA

A0A6J1E3R0 extensin-like7.1e-7796.67Show/hide
Query:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAP
        MASFAVLNVITAALLLISA+ANSPLPSPAPSPESPPWKWTPDT+SPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAP
Subjt:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAP

Query:  SPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA
        SPSKTKAPAPAPSKMS TPARAPKSSA PVSSPPAPNGEMEPPTPSVAPTAPKA+NGGAANRFAIGG+VAFGLMAAALIA
Subjt:  SPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA

A0A6J1JCM0 extensin-like4.3e-7495.56Show/hide
Query:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAP
        MASFAVLNVITAALLLISA+ANSPLPS APSPES PWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSP DANPPTLSPAALPPAVKSPVHAP
Subjt:  MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAP

Query:  SPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA
        SPSKTKAPAPAPSKMSPTPARAPKSSA P SSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAI  SVAFGLMAAALIA
Subjt:  SPSKTKAPAPAPSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G44191.1 ECA1 gametogenesis related family protein1.9e-0541.67Show/hide
Query:  ISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKS----PVHAPSPSKTKAPAPAP
        +S   + P P P+P P +P  K +P    PSSP    PP P  SPP   P PSS  PT  P  +PP   P++ PP+ K     P  +PSP K   P P P
Subjt:  ISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKS----PVHAPSPSKTKAPAPAP

Query:  SKMSPTPARAPKSSAPPVS---SPPAPNGEMEPPTPSVAPTAPK
         K  P+P   PK S+PP S   SPP P     PP PS  P  PK
Subjt:  SKMSPTPARAPKSSAPPVS---SPPAPNGEMEPPTPSVAPTAPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTCGCCGTTCTGAATGTTATCACGGCGGCGCTGCTTCTAATCTCCGCCGCGGCCAACTCTCCCCTACCATCTCCAGCGCCAAGCCCAGAATCACCGCCGTG
GAAATGGACTCCCGATACAGAGTCGCCGTCATCTCCACCAGAGATGGAGCCGCCTTCGCCGTCAGTATCGCCACCGGAGCTCAGCCCTGTTCCGTCATCCGATACCCCGA
CTTCGCCGCCAGATGCTAACCCACCAACATTGTCACCGGCCGCTCTACCGCCGGCGGTGAAGAGTCCCGTTCACGCGCCGTCGCCGTCGAAAACAAAAGCACCAGCTCCT
GCTCCGTCGAAAATGAGTCCGACGCCGGCCAGGGCGCCGAAATCTTCTGCTCCTCCGGTGAGTAGTCCTCCGGCGCCGAATGGGGAGATGGAGCCGCCGACGCCATCCGT
AGCTCCGACAGCGCCGAAGGCGGATAACGGCGGCGCTGCAAACAGATTCGCCATTGGTGGGTCAGTTGCATTTGGATTAATGGCGGCGGCTTTAATCGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTTCGCCGTTCTGAATGTTATCACGGCGGCGCTGCTTCTAATCTCCGCCGCGGCCAACTCTCCCCTACCATCTCCAGCGCCAAGCCCAGAATCACCGCCGTG
GAAATGGACTCCCGATACAGAGTCGCCGTCATCTCCACCAGAGATGGAGCCGCCTTCGCCGTCAGTATCGCCACCGGAGCTCAGCCCTGTTCCGTCATCCGATACCCCGA
CTTCGCCGCCAGATGCTAACCCACCAACATTGTCACCGGCCGCTCTACCGCCGGCGGTGAAGAGTCCCGTTCACGCGCCGTCGCCGTCGAAAACAAAAGCACCAGCTCCT
GCTCCGTCGAAAATGAGTCCGACGCCGGCCAGGGCGCCGAAATCTTCTGCTCCTCCGGTGAGTAGTCCTCCGGCGCCGAATGGGGAGATGGAGCCGCCGACGCCATCCGT
AGCTCCGACAGCGCCGAAGGCGGATAACGGCGGCGCTGCAAACAGATTCGCCATTGGTGGGTCAGTTGCATTTGGATTAATGGCGGCGGCTTTAATCGCTTAA
Protein sequenceShow/hide protein sequence
MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPPSPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAPSPSKTKAPAP
APSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVAFGLMAAALIA