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Carg16793 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16793
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNAD(P)H-quinone oxidoreductase subunit I, chloroplastic
Genome locationCarg_Chr16:1243474..1244289
RNA-Seq ExpressionCarg16793
SyntenyCarg16793
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0005506 - iron ion binding (molecular function)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR004497 - NADH-plastoquinone oxidoreductase, subunit I
IPR017896 - 4Fe-4S ferredoxin-type, iron-sulphur binding domain
IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014879.1 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-87100Show/hide
Query:  MTDTCRFEVLVLFLTFVIRRPTFLGTSRQDPTRRHGQAGKFCHAICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFG
        MTDTCRFEVLVLFLTFVIRRPTFLGTSRQDPTRRHGQAGKFCHAICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFG
Subjt:  MTDTCRFEVLVLFLTFVIRRPTFLGTSRQDPTRRHGQAGKFCHAICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFG

Query:  ICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSIDLIND
        ICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSIDLIND
Subjt:  ICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSIDLIND

YP_009300288.1 NADH dehydrogenase subunit I [Ilex paraguariensis]1.8e-4381.9Show/hide
Query:  ICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGREL
        + + E  + RIHFEFDKCIACEV VRV PIDLPVV+WKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMT EYELSTYDRHELNYNQI+ GR  
Subjt:  ICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGREL

Query:  LHSID
        +  ID
Subjt:  LHSID

YP_009418066.1 NADH-plastoquinone oxidoreductase subunit I [Stewartia pteropetiolata]1.8e-4385.15Show/hide
Query:  ESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSI
        E ++ RIHFEFDKCIACEV VRV PIDLPVV+WKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMT EYELSTYDRHELNYNQI+ GR  +  I
Subjt:  ESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSI

Query:  D
        D
Subjt:  D

YP_009419545.1 NADH-plastoquinone oxidoreductase subunit I [Sladenia celastrifolia]1.8e-4381.9Show/hide
Query:  ICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGREL
        + + E  + RIHFEFDKCIACEV VRV PIDLPVV+WKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMT EYELSTYDRHELNYNQI+ GR  
Subjt:  ICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGREL

Query:  LHSID
        +  ID
Subjt:  LHSID

YP_009764792.1 NdhI [Acrocarpus fraxinifolius]1.8e-4390.62Show/hide
Query:  RIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSID
        RIHFEFDKCIACEV VRV PIDLPVV+WKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMT EYELSTYDRHELNYNQIS GR  L  ID
Subjt:  RIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSID

TrEMBL top hitse value%identityAlignment
A0A1B1NH80 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic8.8e-4481.9Show/hide
Query:  ICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGREL
        + + E  + RIHFEFDKCIACEV VRV PIDLPVV+WKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMT EYELSTYDRHELNYNQI+ GR  
Subjt:  ICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGREL

Query:  LHSID
        +  ID
Subjt:  LHSID

A0A1B1NHR3 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic8.8e-4481.9Show/hide
Query:  ICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGREL
        + + E  + RIHFEFDKCIACEV VRV PIDLPVV+WKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMT EYELSTYDRHELNYNQI+ GR  
Subjt:  ICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGREL

Query:  LHSID
        +  ID
Subjt:  LHSID

A0A221HQM5 NADH dehydrogenase subunit I8.8e-4485.15Show/hide
Query:  ESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSI
        E ++ RIHFEFDKCIACEV VRV PIDLPVV+WKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMT EYELSTYDRHELNYNQI+ GR  +  I
Subjt:  ESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSI

Query:  D
        D
Subjt:  D

A0A649UJS8 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic8.8e-4481.9Show/hide
Query:  ICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGREL
        + + E  + RIHFEFDKCIACEV VRV PIDLPVV+WKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMT EYELSTYDRHELNYNQI+ GR  
Subjt:  ICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGREL

Query:  LHSID
        +  ID
Subjt:  LHSID

A0A6B9VGR5 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic8.8e-4481.9Show/hide
Query:  ICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGREL
        + + E  + RIHFEFDKCIACEV VRV PIDLPVV+WKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMT EYELSTYDRHELNYNQI+ GR  
Subjt:  ICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGREL

Query:  LHSID
        +  ID
Subjt:  LHSID

SwissProt top hitse value%identityAlignment
Q2QD37 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic5.3e-4688.54Show/hide
Query:  RIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSID
        RIHFEFDKCIACEV VRV PIDLPVV+WKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMT EYELSTYDRHELNYNQIS GR  +  +D
Subjt:  RIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSID

Q8HVU7 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic2.4e-4681.9Show/hide
Query:  ICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGREL
        + + E  + RIHFEFDKCIACEV VRV PIDLPVV+WKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMT EYELSTYDRHELNYNQI+ GR  
Subjt:  ICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGREL

Query:  LHSID
        +  ID
Subjt:  LHSID

Q8HVV8 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic6.9e-4688.54Show/hide
Query:  RIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSID
        RIHFEFDKCIACEV VRV PIDLPVV+WKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMT EYELSTYDRHELNYNQI+ GR  +  ID
Subjt:  RIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSID

Q8HVW2 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic9.0e-4688.54Show/hide
Query:  RIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSID
        RIHFEFDKCIACEV VRV PIDLPVV+WKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMT EYELSTYDRHELNYNQI+ GR  +  ID
Subjt:  RIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSID

Q8HVW3 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic9.0e-4688.54Show/hide
Query:  RIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSID
        RIHFEFDKCIACEV VRV PIDLPVV+WKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMT EYELSTYDRHELNYNQI+ GR  +  ID
Subjt:  RIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSID

Arabidopsis top hitse value%identityAlignment
AT1G16700.1 Alpha-helical ferredoxin6.5e-0728.12Show/hide
Query:  DKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELST-------YDRHELNYNQISWGRELLHSI
        ++CIAC++   V P     +  + E +   +R   Y ID   CI+CG C E CP + +     +E +T       YD+ +L  N   W  E+  ++
Subjt:  DKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELST-------YDRHELNYNQISWGRELLHSI

AT1G79010.1 Alpha-helical ferredoxin6.5e-0728.12Show/hide
Query:  DKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELST-------YDRHELNYNQISWGRELLHSI
        ++CIAC++   V P     +  + E +   +R   Y ID   CI+CG C E CP + +     +E +T       YD+ +L  N   W  E+  ++
Subjt:  DKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELST-------YDRHELNYNQISWGRELLHSI

ATCG01090.1 NADPH dehydrogenases7.1e-4686.46Show/hide
Query:  RIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSID
        RIHFEFDKCIACEV VRV PIDLPVV+WKLET+IRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMT EYE STYDRHELNYNQI+ GR  +  ID
Subjt:  RIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGACACGTGTCGGTTTGAAGTCCTTGTTTTGTTTTTGACTTTTGTAATCCGTCGTCCCACTTTCTTGGGAACTTCTAGGCAGGATCCGACACGTCGTCATGGCCA
AGCTGGAAAGTTCTGTCACGCAATTTGCTTGGAAGAGTCCAATAAATTTCGAATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATATGTTCGTGTAAGTCCTA
TAGATCTCCCCGTTGTTAATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAACTATAGTATTGATTTCGGGATCTGTATATTTTGTGGTAACTGCGTTGAA
TATTGTCCAACGAATTGTTTATCAATGACTGGAGAATATGAACTTTCTACTTATGATCGTCACGAATTGAATTATAATCAAATTTCTTGGGGTCGTGAGTTGCTTCACTC
AATAGATTTAATTAATGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTGACACGTGTCGGTTTGAAGTCCTTGTTTTGTTTTTGACTTTTGTAATCCGTCGTCCCACTTTCTTGGGAACTTCTAGGCAGGATCCGACACGTCGTCATGGCCA
AGCTGGAAAGTTCTGTCACGCAATTTGCTTGGAAGAGTCCAATAAATTTCGAATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATATGTTCGTGTAAGTCCTA
TAGATCTCCCCGTTGTTAATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAACTATAGTATTGATTTCGGGATCTGTATATTTTGTGGTAACTGCGTTGAA
TATTGTCCAACGAATTGTTTATCAATGACTGGAGAATATGAACTTTCTACTTATGATCGTCACGAATTGAATTATAATCAAATTTCTTGGGGTCGTGAGTTGCTTCACTC
AATAGATTTAATTAATGATTAA
Protein sequenceShow/hide protein sequence
MTDTCRFEVLVLFLTFVIRRPTFLGTSRQDPTRRHGQAGKFCHAICLEESNKFRIHFEFDKCIACEVYVRVSPIDLPVVNWKLETDIRKKRLLNYSIDFGICIFCGNCVE
YCPTNCLSMTGEYELSTYDRHELNYNQISWGRELLHSIDLIND