; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16794 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16794
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncopper-transporting ATPase PAA1, chloroplastic isoform X1
Genome locationCarg_Chr16:1245025..1245682
RNA-Seq ExpressionCarg16794
SyntenyCarg16794
Gene Ontology termsGO:0098655 - cation transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0019829 - ATPase-coupled cation transmembrane transporter activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576859.1 Copper-transporting ATPase PAA1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.8e-64100Show/hide
Query:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG
        MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG
Subjt:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG

Query:  NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG
        NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG
Subjt:  NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG

KAG7014880.1 hypothetical protein SDJN02_22510, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-87100Show/hide
Query:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG
        MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG
Subjt:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG

Query:  NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVGVWISHRFLEKKKIVGNDMRGMCSKCEENTRESGYSY
        NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVGVWISHRFLEKKKIVGNDMRGMCSKCEENTRESGYSY
Subjt:  NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVGVWISHRFLEKKKIVGNDMRGMCSKCEENTRESGYSY

XP_022922942.1 copper-transporting ATPase PAA1, chloroplastic isoform X1 [Cucurbita moschata]2.8e-64100Show/hide
Query:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG
        MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG
Subjt:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG

Query:  NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG
        NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG
Subjt:  NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG

XP_022984847.1 copper-transporting ATPase PAA1, chloroplastic isoform X1 [Cucurbita maxima]3.5e-6296.48Show/hide
Query:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG
        MDSVFAAATSNIA+CCVSKALNRRLSEIVRRRCVRGGDRARNF+CISSYLALYGTG IGSSSPSLR LQVVLPSLQ RLRCVSSSSVSFASGGGNGGFGG
Subjt:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG

Query:  NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG
        NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG
Subjt:  NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG

XP_023552687.1 copper-transporting ATPase PAA1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]1.4e-6398.59Show/hide
Query:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG
        MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCIS YLALYGTGLIGSSSPSLRTLQV+LPSLQRRLRCVSSSSVSFASGGGNGGFGG
Subjt:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG

Query:  NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG
        NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG
Subjt:  NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG

TrEMBL top hitse value%identityAlignment
A0A0A0L0P7 HMA domain-containing protein4.0e-4881.82Show/hide
Query:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYG-TGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFG
        MDSVF+A T NIAICCV KA N RLSEIVR  CV  GDRAR FSCISSYL +YG T L GS SPSLRTLQVVLPSL+RRLRCVSSSSVSF SGGGNGG G
Subjt:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYG-TGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFG

Query:  GNNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG
        GN GGGGRGGDGGLGGGD NK VSGSAEE+SSLL +VIILDVG
Subjt:  GNNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG

A0A5A7TQZ7 Copper-transporting ATPase PAA19.8e-4779.72Show/hide
Query:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSS-SPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFG
        MDS+F+A T NIA CCVSKA N RLSE+VR RCV+GGDRA  FSCISSYL +Y T  + SS SPSLRTLQVVLPSL+RRLRCVSSSSVSFAS GGNGG G
Subjt:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSS-SPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFG

Query:  GNNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG
        GN+GGGGRGGDGGLGG   NKFVSGSAEE+SSLLP+VIILDVG
Subjt:  GNNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG

A0A6J1CHL7 copper-transporting ATPase PAA1, chloroplastic isoform X13.3e-5081.69Show/hide
Query:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG
        MDSVF  AT N+A CCVS+ALNR+LSEIVRR+C+ GGDRAR FSCISSYL L+GT   GS S SLRTLQVVLPSL+RRL+CVSSSSVSFASGGGNGG GG
Subjt:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG

Query:  NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG
         NGGGGRGGDGG GGGDANKF SGSAEEVSS LPNVI+LDVG
Subjt:  NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG

A0A6J1E4S2 copper-transporting ATPase PAA1, chloroplastic isoform X11.4e-64100Show/hide
Query:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG
        MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG
Subjt:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG

Query:  NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG
        NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG
Subjt:  NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG

A0A6J1J3A7 copper-transporting ATPase PAA1, chloroplastic isoform X11.7e-6296.48Show/hide
Query:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG
        MDSVFAAATSNIA+CCVSKALNRRLSEIVRRRCVRGGDRARNF+CISSYLALYGTG IGSSSPSLR LQVVLPSLQ RLRCVSSSSVSFASGGGNGGFGG
Subjt:  MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGG

Query:  NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG
        NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG
Subjt:  NNGGGGRGGDGGLGGGDANKFVSGSAEEVSSLLPNVIILDVG

SwissProt top hitse value%identityAlignment
Q9SZC9 Copper-transporting ATPase PAA1, chloroplastic6.9e-0538.73Show/hide
Query:  NIAICCVSKALN------RRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTL-QVVLPSLQRRLRCVSSSSVSF--ASGGGNGGFGGN
        ++ +  +SKALN      R L  ++  RC     R   F         +G+    S+S +LR+L   VLP ++ RL C+SSSS SF   S GG  GFGG 
Subjt:  NIAICCVSKALN------RRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTL-QVVLPSLQRRLRCVSSSSVSF--ASGGGNGGFGGN

Query:  NGGGGRGGDGGLGGGDA-NKFVSGSAEEVSSLLPNVIILDVG
        NGG G GG GG   GD+ +K  + +++ VS    ++IILDVG
Subjt:  NGGGGRGGDGGLGGGDA-NKFVSGSAEEVSSLLPNVIILDVG

Arabidopsis top hitse value%identityAlignment
AT4G33520.1 P-type ATP-ase 14.9e-0638.73Show/hide
Query:  NIAICCVSKALN------RRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTL-QVVLPSLQRRLRCVSSSSVSF--ASGGGNGGFGGN
        ++ +  +SKALN      R L  ++  RC     R   F         +G+    S+S +LR+L   VLP ++ RL C+SSSS SF   S GG  GFGG 
Subjt:  NIAICCVSKALN------RRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTL-QVVLPSLQRRLRCVSSSSVSF--ASGGGNGGFGGN

Query:  NGGGGRGGDGGLGGGDA-NKFVSGSAEEVSSLLPNVIILDVG
        NGG G GG GG   GD+ +K  + +++ VS    ++IILDVG
Subjt:  NGGGGRGGDGGLGGGDA-NKFVSGSAEEVSSLLPNVIILDVG

AT4G33520.2 P-type ATP-ase 14.9e-0638.73Show/hide
Query:  NIAICCVSKALN------RRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTL-QVVLPSLQRRLRCVSSSSVSF--ASGGGNGGFGGN
        ++ +  +SKALN      R L  ++  RC     R   F         +G+    S+S +LR+L   VLP ++ RL C+SSSS SF   S GG  GFGG 
Subjt:  NIAICCVSKALN------RRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTL-QVVLPSLQRRLRCVSSSSVSF--ASGGGNGGFGGN

Query:  NGGGGRGGDGGLGGGDA-NKFVSGSAEEVSSLLPNVIILDVG
        NGG G GG GG   GD+ +K  + +++ VS    ++IILDVG
Subjt:  NGGGGRGGDGGLGGGDA-NKFVSGSAEEVSSLLPNVIILDVG

AT4G33520.3 P-type ATP-ase 14.9e-0638.73Show/hide
Query:  NIAICCVSKALN------RRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTL-QVVLPSLQRRLRCVSSSSVSF--ASGGGNGGFGGN
        ++ +  +SKALN      R L  ++  RC     R   F         +G+    S+S +LR+L   VLP ++ RL C+SSSS SF   S GG  GFGG 
Subjt:  NIAICCVSKALN------RRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTL-QVVLPSLQRRLRCVSSSSVSF--ASGGGNGGFGGN

Query:  NGGGGRGGDGGLGGGDA-NKFVSGSAEEVSSLLPNVIILDVG
        NGG G GG GG   GD+ +K  + +++ VS    ++IILDVG
Subjt:  NGGGGRGGDGGLGGGDA-NKFVSGSAEEVSSLLPNVIILDVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCCGTCTTTGCTGCTGCGACGAGCAACATAGCTATATGTTGCGTTTCGAAGGCCTTGAATCGGAGGCTCTCCGAAATTGTTCGTAGAAGATGCGTTCGCGGTGG
TGACCGAGCTCGCAATTTCAGCTGCATTTCCAGTTACCTTGCTCTATACGGAACTGGACTTATTGGTTCTTCTTCACCGTCGCTTAGGACTCTGCAAGTTGTTTTGCCTT
CGCTGCAGCGTCGTTTGCGTTGCGTTTCGAGTTCCTCTGTGTCTTTTGCATCTGGTGGCGGGAATGGTGGTTTTGGAGGGAATAATGGCGGCGGAGGTCGTGGTGGAGAT
GGTGGACTGGGCGGTGGAGATGCGAATAAGTTTGTTTCTGGAAGTGCCGAGGAGGTTTCTTCACTATTGCCTAACGTGATTATTCTGGATGTTGGAGTATGGATTTCGCA
TCGCTTCCTTGAAAAAAAAAAAATCGTAGGGAATGACATGCGGGGGATGTGCAGCAAGTGTGAAGAGAATACTAGAGAATCAGGTTATAGTTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTCCGTCTTTGCTGCTGCGACGAGCAACATAGCTATATGTTGCGTTTCGAAGGCCTTGAATCGGAGGCTCTCCGAAATTGTTCGTAGAAGATGCGTTCGCGGTGG
TGACCGAGCTCGCAATTTCAGCTGCATTTCCAGTTACCTTGCTCTATACGGAACTGGACTTATTGGTTCTTCTTCACCGTCGCTTAGGACTCTGCAAGTTGTTTTGCCTT
CGCTGCAGCGTCGTTTGCGTTGCGTTTCGAGTTCCTCTGTGTCTTTTGCATCTGGTGGCGGGAATGGTGGTTTTGGAGGGAATAATGGCGGCGGAGGTCGTGGTGGAGAT
GGTGGACTGGGCGGTGGAGATGCGAATAAGTTTGTTTCTGGAAGTGCCGAGGAGGTTTCTTCACTATTGCCTAACGTGATTATTCTGGATGTTGGAGTATGGATTTCGCA
TCGCTTCCTTGAAAAAAAAAAAATCGTAGGGAATGACATGCGGGGGATGTGCAGCAAGTGTGAAGAGAATACTAGAGAATCAGGTTATAGTTACTAA
Protein sequenceShow/hide protein sequence
MDSVFAAATSNIAICCVSKALNRRLSEIVRRRCVRGGDRARNFSCISSYLALYGTGLIGSSSPSLRTLQVVLPSLQRRLRCVSSSSVSFASGGGNGGFGGNNGGGGRGGD
GGLGGGDANKFVSGSAEEVSSLLPNVIILDVGVWISHRFLEKKKIVGNDMRGMCSKCEENTRESGYSY