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Carg16807 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16807
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationCarg_Chr16:1309791..1310029
RNA-Seq ExpressionCarg16807
SyntenyCarg16807
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEU63752.1 hypothetical protein [Tanacetum cinerariifolium]4.3e-0470.27Show/hide
Query:  ENSARTALKLRINIPKSKEYACVFQREHRKNLIQLHV
        +N ART L+L+ N P SKEYA VFQREHRKNLIQL++
Subjt:  ENSARTALKLRINIPKSKEYACVFQREHRKNLIQLHV
GEV07194.1 NADH dehydrogenase subunit 3, mitochondrial [Tanacetum cinerariifolium]3.0e-0575Show/hide
Query:  ENSARTALKLRINIPKSKEYACVFQREHRKNLIQLH
        EN ART L+L IN+P+SKEYA V++REHRKNLIQLH
Subjt:  ENSARTALKLRINIPKSKEYACVFQREHRKNLIQLH
KAF3452163.1 hypothetical protein FNV43_RR08261 [Rhamnella rubrinervis]4.6e-0677.78Show/hide
Query:  ENSARTALKLRINIPKSKEYACVFQREHRKNLIQLH
        +N ART L+LRIN+P+SKEYA VFQREH+KNLIQLH
Subjt:  ENSARTALKLRINIPKSKEYACVFQREHRKNLIQLH
KAG2611575.1 hypothetical protein PVAP13_4KG104120 [Panicum virgatum]7.3e-0476.67Show/hide
Query:  ENSARTALKLRINIPKSKEYACVFQREHRK
        +N ART L+LRIN+P+SKEYACVF+REHRK
Subjt:  ENSARTALKLRINIPKSKEYACVFQREHRK
KAG7014891.1 hypothetical protein SDJN02_22522, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-24100Show/hide
Query:  MAHGLYSSFRSMSLEARSTTAKYENSARTALKLRINIPKSKEYACVFQREHRKNLIQLHVR
        MAHGLYSSFRSMSLEARSTTAKYENSARTALKLRINIPKSKEYACVFQREHRKNLIQLHVR
Subjt:  MAHGLYSSFRSMSLEARSTTAKYENSARTALKLRINIPKSKEYACVFQREHRKNLIQLHVR
TrEMBL top hitse value%identityAlignment
A0A6L2LTI1 Retrotran_gag_3 domain-containing protein2.1e-0470.27Show/hide
Query:  ENSARTALKLRINIPKSKEYACVFQREHRKNLIQLHV
        +N ART L+L+ N P SKEYA VFQREHRKNLIQL++
Subjt:  ENSARTALKLRINIPKSKEYACVFQREHRKNLIQLHV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACACGGACTATACTCGAGCTTCAGATCAATGTCCTTAGAAGCAAGGAGTACGACCGCAAAGTACGAAAACAGCGCACGGACCGCACTCAAGCTTCGAATCAATAT
CCCAAAAAGCAAGGAGTACGCTTGTGTCTTTCAACGAGAACACCGTAAAAACCTAATTCAGCTCCATGTAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCACACGGACTATACTCGAGCTTCAGATCAATGTCCTTAGAAGCAAGGAGTACGACCGCAAAGTACGAAAACAGCGCACGGACCGCACTCAAGCTTCGAATCAATAT
CCCAAAAAGCAAGGAGTACGCTTGTGTCTTTCAACGAGAACACCGTAAAAACCTAATTCAGCTCCATGTAAGATAG
Protein sequenceShow/hide protein sequence
MAHGLYSSFRSMSLEARSTTAKYENSARTALKLRINIPKSKEYACVFQREHRKNLIQLHVR