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Carg16808 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16808
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionmitochondrial import inner membrane translocase subunit PAM16 like 2-like
Genome locationCarg_Chr19:21544..23880
RNA-Seq ExpressionCarg16808
SyntenyCarg16808
Gene Ontology termsGO:0030150 - protein import into mitochondrial matrix (biological process)
GO:0005744 - TIM23 mitochondrial import inner membrane translocase complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005341 - Mitochondrial import inner membrane translocase subunit Tim16
IPR036869 - Chaperone J-domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011201.1 Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-52100Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

XP_022925423.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata]1.0e-5198.28Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVT ETPWEEIVKKYDALFE+NAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

XP_022963881.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata]4.7e-5298.28Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQILG+TAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

XP_022967548.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like isoform X3 [Cucurbita maxima]4.0e-5198.28Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDA S
Subjt:  ERLETLYQSKGQDAPS

XP_023535168.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita pepo subsp. pepo]6.8e-5196.55Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGV+ ETPWEEIVKKYDALFE+NAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKG+DAPS
Subjt:  ERLETLYQSKGQDAPS

TrEMBL top hitse value%identityAlignment
A0A5D3E4Y7 Mitochondrial import inner membrane translocase subunit tim165.6e-5195.69Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVMTEQEARQILGVT ETPWEE+VKKYDALFERNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQ+KGQDAPS
Subjt:  ERLETLYQSKGQDAPS

A0A6J1EF52 mitochondrial import inner membrane translocase subunit PAM16 like 2-like5.1e-5298.28Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVT ETPWEEIVKKYDALFE+NAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

A0A6J1HHA5 mitochondrial import inner membrane translocase subunit PAM16 like 2-like2.3e-5298.28Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQILG+TAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

A0A6J1HVD2 mitochondrial import inner membrane translocase subunit PAM16 like 2-like isoform X31.9e-5198.28Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDA S
Subjt:  ERLETLYQSKGQDAPS

A0A6J1IG86 mitochondrial import inner membrane translocase subunit PAM16 like 2-like4.3e-5196.55Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGV+ ETPWEEIVKKYDALFE+N QTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        ERLETLYQSKGQDAPS
Subjt:  ERLETLYQSKGQDAPS

SwissProt top hitse value%identityAlignment
Q5XGJ0 Mitochondrial import inner membrane translocase subunit tim161.3e-0944.34Show/hide
Query:  AKILANLIVMGSGILARAFVQAYRQ--ALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQT--GSFYLQSKVHR
        AK LA ++VMG  ++ RAF +A RQ  A + A+     +   ++    +   ++ QEA+QIL V+  TP EEI K Y+ LF+ N +   GSFYLQSKV R
Subjt:  AKILANLIVMGSGILARAFVQAYRQ--ALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQT--GSFYLQSKVHR

Query:  AKERLE
        AKERL+
Subjt:  AKERLE

Q6PBL0 Mitochondrial import inner membrane translocase subunit tim168.4e-1248.11Show/hide
Query:  AKILANLIVMGSGILARAFVQAYRQ--ALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERN--AQTGSFYLQSKVHR
        AK LA +IVMG+ ++ RAF +A RQ  A + A+     Q   Q+    +   MT QEA+QIL ++  TP EEI K Y+ LF+ N  A  GSFY+QSKV R
Subjt:  AKILANLIVMGSGILARAFVQAYRQ--ALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERN--AQTGSFYLQSKVHR

Query:  AKERLE
        AKERL+
Subjt:  AKERLE

Q93VV9 Mitochondrial import inner membrane translocase subunit PAM16 like 21.4e-3872.41Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MA ++LANLIVMGSGI+ RA  QAYRQAL NASKSGVAQE +QN VR+A K +TEQEARQILGVT +T WEEI++KYD LFE NA+ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        E LE +Y+S+G   PS
Subjt:  ERLETLYQSKGQDAPS

Q93W66 Mitochondrial import inner membrane translocase subunit PAM16 like 11.6e-3170.37Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q T++R   +  E EARQILGVT ++ W+EI+KKYD LFERNAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQ
        E LET YQ
Subjt:  ERLETLYQ

Q9C1W5 Mitochondrial import inner membrane translocase subunit tim161.0e-0938.79Show/hide
Query:  KILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNT---VRRASKVMTEQEARQILGVTAETPWE-EIVKKYDALFERN--AQTGSFYLQSKVH
        + +   I++GS ++++AFVQAY+Q + NA++    Q     +   VRR    MT QEA  IL +  E+  E E+ K++  +FE N   + GSFYLQSKV 
Subjt:  KILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNT---VRRASKVMTEQEARQILGVTAETPWE-EIVKKYDALFERN--AQTGSFYLQSKVH

Query:  RAKERLETLYQSKGQD
        RA E+L++    K Q+
Subjt:  RAKERLETLYQSKGQD

Arabidopsis top hitse value%identityAlignment
AT3G59280.1 Protein Transporter, Pam169.8e-4072.41Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MA ++LANLIVMGSGI+ RA  QAYRQAL NASKSGVAQE +QN VR+A K +TEQEARQILGVT +T WEEI++KYD LFE NA+ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDAPS
        E LE +Y+S+G   PS
Subjt:  ERLETLYQSKGQDAPS

AT5G61880.1 Protein Transporter, Pam161.2e-3270.37Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q T++R   +  E EARQILGVT ++ W+EI+KKYD LFERNAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQ
        E LET YQ
Subjt:  ERLETLYQ

AT5G61880.2 Protein Transporter, Pam161.2e-3270.37Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK
        MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q T++R   +  E EARQILGVT ++ W+EI+KKYD LFERNAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQ
        E LET YQ
Subjt:  ERLETLYQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTATCGTCAAGCCCTTACGAATGCTTCGAAGTCCGGTGT
TGCTCAAGAAACAATTCAAAACACCGTTCGCAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCCAGGCAGATTCTTGGCGTCACCGCGGAAACGCCTTGGGAGGAAATTG
TGAAGAAATATGACGCATTGTTTGAAAGGAATGCTCAGACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAGCAAA
GGTCAGGATGCCCCTAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAAAAATTCTTGCCAATTTAATTGTGATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTATCGTCAAGCCCTTACGAATGCTTCGAAGTCCGGTGT
TGCTCAAGAAACAATTCAAAACACCGTTCGCAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCCAGGCAGATTCTTGGCGTCACCGCGGAAACGCCTTGGGAGGAAATTG
TGAAGAAATATGACGCATTGTTTGAAAGGAATGCTCAGACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAGCAAA
GGTCAGGATGCCCCTAGCTGA
Protein sequenceShow/hide protein sequence
MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSK
GQDAPS