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Carg16824 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16824
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncalmodulin-like
Genome locationCarg_Chr19:121166..123531
RNA-Seq ExpressionCarg16824
SyntenyCarg16824
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571450.1 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.7e-4369.8Show/hide
Query:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------
        MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK                     
Subjt:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------

Query:  ------------------------MIREADLDGDGRVSYEEFARIMTIS
                                MIREADLDGDGRVSYEEFARIMTIS
Subjt:  ------------------------MIREADLDGDGRVSYEEFARIMTIS

KAG7011216.1 Calmodulin-2 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-49100Show/hide
Query:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMKMIREADLDGDGRVSYEEFARI
        MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMKMIREADLDGDGRVSYEEFARI
Subjt:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMKMIREADLDGDGRVSYEEFARI

Query:  MTIS
        MTIS
Subjt:  MTIS

XP_022963884.1 calmodulin-like [Cucurbita moschata]4.7e-4369.8Show/hide
Query:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------
        MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK                     
Subjt:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------

Query:  ------------------------MIREADLDGDGRVSYEEFARIMTIS
                                MIREADLDGDGRVSYEEFARIMTIS
Subjt:  ------------------------MIREADLDGDGRVSYEEFARIMTIS

XP_022967376.1 calmodulin-like [Cucurbita maxima]5.2e-4268.46Show/hide
Query:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------
        MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNG IDF+EFLNVMARKMK                     
Subjt:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------

Query:  ------------------------MIREADLDGDGRVSYEEFARIMTIS
                                MIREADLDGDGRVSYEEFARIMTIS
Subjt:  ------------------------MIREADLDGDGRVSYEEFARIMTIS

XP_023553891.1 calmodulin-like [Cucurbita pepo subsp. pepo]1.0e-4269.13Show/hide
Query:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------
        MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK                     
Subjt:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------

Query:  ------------------------MIREADLDGDGRVSYEEFARIMTIS
                                MIREADLDGDGRV+YEEFARIMTIS
Subjt:  ------------------------MIREADLDGDGRVSYEEFARIMTIS

TrEMBL top hitse value%identityAlignment
A0A0A0LLR3 Uncharacterized protein3.1e-4065.1Show/hide
Query:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------
        MAAEALTEDQIADFREAFCLIDKDADGFIT+EELGA IQ+LD HPTKNE+RDMISEVDVD+NGTIDF+EFLNVMARKMK                     
Subjt:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------

Query:  ------------------------MIREADLDGDGRVSYEEFARIMTIS
                                MIREADLDGDGRVSYEEFARIMTIS
Subjt:  ------------------------MIREADLDGDGRVSYEEFARIMTIS

A0A1S3BL89 calmodulin-like1.4e-4065.77Show/hide
Query:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------
        MAAEALTEDQIADFREAFCLIDKDADGFITVEELGA IQ+LD HPTKNE+RDMISEVDVD+NGTIDF+EFLNVMARKMK                     
Subjt:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------

Query:  ------------------------MIREADLDGDGRVSYEEFARIMTIS
                                MIREADLDGDGRVSYEEFARIMTIS
Subjt:  ------------------------MIREADLDGDGRVSYEEFARIMTIS

A0A5A7UTD2 Calmodulin-like3.1e-4065.1Show/hide
Query:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------
        MAAEALTEDQIADFREAFCLIDKDADGFITVEELGA IQ+LD HPTKNE+RDMISEVDVD+NGTIDF+EFLNVMARKMK                     
Subjt:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------

Query:  ------------------------MIREADLDGDGRVSYEEFARIMTIS
                                MIREADLDGDGRVSYEEFARIMTI+
Subjt:  ------------------------MIREADLDGDGRVSYEEFARIMTIS

A0A6J1HLH5 calmodulin-like2.3e-4369.8Show/hide
Query:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------
        MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK                     
Subjt:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------

Query:  ------------------------MIREADLDGDGRVSYEEFARIMTIS
                                MIREADLDGDGRVSYEEFARIMTIS
Subjt:  ------------------------MIREADLDGDGRVSYEEFARIMTIS

A0A6J1HUX6 calmodulin-like2.5e-4268.46Show/hide
Query:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------
        MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNG IDF+EFLNVMARKMK                     
Subjt:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK---------------------

Query:  ------------------------MIREADLDGDGRVSYEEFARIMTIS
                                MIREADLDGDGRVSYEEFARIMTIS
Subjt:  ------------------------MIREADLDGDGRVSYEEFARIMTIS

SwissProt top hitse value%identityAlignment
A2WN93 Calmodulin-19.2e-2644.14Show/hide
Query:  AEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK-----------------------
        A+ LT+DQIA+F+EAF L DKD DG IT +ELG  +++L  +PT+ E++DMI+EVD D NGTIDF EFLN+MARKMK                       
Subjt:  AEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK-----------------------

Query:  -----------------------MIREADLDGDGRVSYEEFARIM
                               MIREAD+DGDG+++YEEF ++M
Subjt:  -----------------------MIREADLDGDGRVSYEEFARIM

P04352 Calmodulin7.0e-2646.21Show/hide
Query:  EALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK------------------------
        E LTE+QIA+F+EAF L DKD DG IT +ELG  +++L  +PT+ E++DMISEVD D NGTIDF EFL +MARKMK                        
Subjt:  EALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK------------------------

Query:  ----------------------MIREADLDGDGRVSYEEFARIMT
                              MIREAD+DGDG+V+YEEF R+MT
Subjt:  ----------------------MIREADLDGDGRVSYEEFARIMT

P13868 Calmodulin-13.2e-2646.21Show/hide
Query:  AEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK-----------------------
        AE LTE+QIA+F+EAF L DKD DG IT +ELG  +++L  +PT+ E++DMISE D D NGTIDF EFLN+MARKMK                       
Subjt:  AEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK-----------------------

Query:  -----------------------MIREADLDGDGRVSYEEFARIM
                               MIREAD+DGDG+V+YEEF R+M
Subjt:  -----------------------MIREADLDGDGRVSYEEFARIM

P27161 Calmodulin1.1e-2646.9Show/hide
Query:  AEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK-----------------------
        AE LTE+QIA+F+EAF L DKD DG IT +ELG  +++L  +PT+ E++DMISEVD D NGTIDF EFLN+MARKMK                       
Subjt:  AEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK-----------------------

Query:  -----------------------MIREADLDGDGRVSYEEFARIM
                               MIREAD+DGDG+V+YEEF R+M
Subjt:  -----------------------MIREADLDGDGRVSYEEFARIM

P27163 Calmodulin-21.1e-2646.9Show/hide
Query:  AEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK-----------------------
        AE LTE+QIA+F+EAF L DKD DG IT +ELG  +++L  +PT+ E++DMISEVD D NGTIDF EFLN+MARKMK                       
Subjt:  AEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK-----------------------

Query:  -----------------------MIREADLDGDGRVSYEEFARIM
                               MIREAD+DGDG+V+YEEF R+M
Subjt:  -----------------------MIREADLDGDGRVSYEEFARIM

Arabidopsis top hitse value%identityAlignment
AT2G27030.1 calmodulin 53.2e-2642.76Show/hide
Query:  AEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK-----------------------
        A+ LT+DQI++F+EAF L DKD DG IT +ELG  +++L  +PT+ E++DMI+EVD D NGTIDF EFLN+MARKMK                       
Subjt:  AEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK-----------------------

Query:  -----------------------MIREADLDGDGRVSYEEFARIM
                               MI+EAD+DGDG+++YEEF ++M
Subjt:  -----------------------MIREADLDGDGRVSYEEFARIM

AT2G41110.1 calmodulin 23.2e-2642.76Show/hide
Query:  AEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK-----------------------
        A+ LT+DQI++F+EAF L DKD DG IT +ELG  +++L  +PT+ E++DMI+EVD D NGTIDF EFLN+MARKMK                       
Subjt:  AEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK-----------------------

Query:  -----------------------MIREADLDGDGRVSYEEFARIM
                               MI+EAD+DGDG+++YEEF ++M
Subjt:  -----------------------MIREADLDGDGRVSYEEFARIM

AT3G43810.1 calmodulin 71.5e-2643.45Show/hide
Query:  AEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK-----------------------
        A+ LT+DQI++F+EAF L DKD DG IT +ELG  +++L  +PT+ E++DMI+EVD D NGTIDF EFLN+MARKMK                       
Subjt:  AEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK-----------------------

Query:  -----------------------MIREADLDGDGRVSYEEFARIM
                               MIREAD+DGDG+++YEEF ++M
Subjt:  -----------------------MIREADLDGDGRVSYEEFARIM

AT4G14640.1 calmodulin 81.1e-2642.86Show/hide
Query:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKM----------------------
        M   ALT+DQI +F+EAFCL DKD DG ITVEEL   I++LD +PT+ E+ D+I+E+D DSNGTI+F EFLN+MA+K+                      
Subjt:  MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKM----------------------

Query:  ------------------------KMIREADLDGDGRVSYEEFARIM
                                +MI+EADLDGDG+V+Y+EF ++M
Subjt:  ------------------------KMIREADLDGDGRVSYEEFARIM

AT5G21274.1 calmodulin 61.5e-2643.45Show/hide
Query:  AEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK-----------------------
        A+ LT+DQI++F+EAF L DKD DG IT +ELG  +++L  +PT+ E++DMI+EVD D NGTIDF EFLN+MARKMK                       
Subjt:  AEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMK-----------------------

Query:  -----------------------MIREADLDGDGRVSYEEFARIM
                               MIREAD+DGDG+++YEEF ++M
Subjt:  -----------------------MIREADLDGDGRVSYEEFARIM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTGAAGCTCTTACAGAAGATCAGATCGCTGATTTTCGTGAAGCCTTCTGTTTAATCGACAAGGATGCTGATGGATTCATCACGGTGGAGGAGCTAGGGGCAGC
AATTCAGACATTGGATGGACACCCCACCAAGAATGAAGTTAGAGATATGATAAGTGAAGTCGATGTCGACAGTAACGGGACGATAGACTTTGAGGAGTTTCTAAATGTCA
TGGCAAGGAAAATGAAGATGATTCGAGAGGCCGATTTGGATGGCGATGGCCGAGTGAGTTACGAAGAGTTTGCAAGGATAATGACAATCAGTTGA
mRNA sequenceShow/hide mRNA sequence
CTGGGAAGATGATAATTTTCTTTGAGCGCGTTTGACTATTTCAATTTTTCCATTGAACAATCAACATTATTGTTCTCTTTTTTTCAGCTCACCTACTGATTGCAACATGT
ATATAAGAATATAAACGTTTGAATCGCATTTCACCACAAACTCCTTCGTTTTCTTCTTTCTCGTGTTCATTCTGTCCATTGTTGATTACAGCGACCGAGCTTTTATGGCT
GCTGAAGCTCTTACAGAAGATCAGATCGCTGATTTTCGTGAAGCCTTCTGTTTAATCGACAAGGATGCTGATGGATTCATCACGGTGGAGGAGCTAGGGGCAGCAATTCA
GACATTGGATGGACACCCCACCAAGAATGAAGTTAGAGATATGATAAGTGAAGTCGATGTCGACAGTAACGGGACGATAGACTTTGAGGAGTTTCTAAATGTCATGGCAA
GGAAAATGAAGATGATTCGAGAGGCCGATTTGGATGGCGATGGCCGAGTGAGTTACGAAGAGTTTGCAAGGATAATGACAATCAGTTGA
Protein sequenceShow/hide protein sequence
MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAAIQTLDGHPTKNEVRDMISEVDVDSNGTIDFEEFLNVMARKMKMIREADLDGDGRVSYEEFARIMTIS