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Carg16836 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16836
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSpindle pole body-associated protein
Genome locationCarg_Chr19:193883..197217
RNA-Seq ExpressionCarg16836
SyntenyCarg16836
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571465.1 hypothetical protein SDJN03_28193, partial [Cucurbita argyrosperma subsp. sororia]6.5e-7999.35Show/hide
Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKV
        LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRK+
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKV

KAG7011228.1 hypothetical protein SDJN02_26131 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-87100Show/hide
Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

XP_022963485.1 uncharacterized protein LOC111463803 [Cucurbita moschata]2.9e-8799.4Show/hide
Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWT+T
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

XP_022967429.1 uncharacterized protein LOC111466970 [Cucurbita maxima]4.2e-8698.2Show/hide
Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQ VSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        LTGSLVIASSWLLIKSIAVTAVVLALIC+WWYIFLYSYPKAY+DMIAERRRKVSDGVEDTFGVKRTQ
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

XP_023553740.1 uncharacterized protein LOC111811218 [Cucurbita pepo subsp. pepo]9.4e-8698.2Show/hide
Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQ VSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        LTG LVIASSWLLIKSIAVTAVVL LICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

TrEMBL top hitse value%identityAlignment
A0A0A0KED9 Uncharacterized protein2.9e-7282.74Show/hide
Query:  MGTVSLFLATSLRSHHFP-STQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTI
        MG VS FLA+SLR + FP STQTLLSNFAASSQ +SFTP CT+FR K++VFGKQS N+++SQFLDENG VNDMDGYLNYHSFEYDSVWDTKP+WCQPWTI
Subjt:  MGTVSLFLATSLRSHHFP-STQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTI

Query:  TLTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        TLTG LVIASSW+ IKSIAVTAV+L LIC WWYIFLYSYPKAY++MIAERRRKVSDG+EDTFGVKRTQ
Subjt:  TLTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

A0A1S3BLE6 uncharacterized protein LOC103491324 isoform X12.9e-7282.74Show/hide
Query:  MGTVSLFLATSLRSHHFP-STQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTI
        MG +SL LATSL S+HFP STQTLLSNFAASSQ +SFTPKCT+FR K++VFGKQS  +++SQFLDENG V+DMDGYLNYHSFEYDSVWDTKPSWCQPWTI
Subjt:  MGTVSLFLATSLRSHHFP-STQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTI

Query:  TLTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        TLTG LVIASSW+ IKS+AVTAV+L LIC WWYIFLYSYPKAY++MIAERRRKVSDG+EDTFGVKRTQ
Subjt:  TLTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

A0A6J1CY32 uncharacterized protein LOC1110152751.2e-6777.51Show/hide
Query:  MGTVSLFLATSLRSHHFP--STQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWT
        +  V LFLATSLRSHHFP  STQTLL+NF A+SQ VS TP+CT+FRRK+VVFGKQS+N +ESQFLDENG V+DMDGYLNY S EYDSVWDTKPSWCQPWT
Subjt:  MGTVSLFLATSLRSHHFP--STQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWT

Query:  ITLTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        ITLTG L+ ASSW +IKSIAVTAV+L++I  WWYIFLYSYPKAY++MIAERR+KV+DG EDTFGV++TQ
Subjt:  ITLTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

A0A6J1HI50 uncharacterized protein LOC1114638031.4e-8799.4Show/hide
Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWT+T
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

A0A6J1HWP2 uncharacterized protein LOC1114669702.0e-8698.2Show/hide
Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQ VSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ
        LTGSLVIASSWLLIKSIAVTAVVLALIC+WWYIFLYSYPKAY+DMIAERRRKVSDGVEDTFGVKRTQ
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02725.1 unknown protein2.7e-3848.73Show/hide
Query:  SLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGS
        SL ++    S   P T+ LLS  +  +   SF  K  R   K   FG       +S+F+DE G V+DM+G+L+  S EYDSVWDTKPSWCQPWTI LTG 
Subjt:  SLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGS

Query:  LVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFG
         ++A SW+++ S+ V+++ + +I +WWYIFLYSYPK+Y++MIAERR++V+DG ED +G
Subjt:  LVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFG

AT4G02725.2 unknown protein5.0e-2947.06Show/hide
Query:  SLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGS
        SL ++    S   P T+ LLS  +  +   SF  K  R   K   FG       +S+F+DE G V+DM+G+L+  S EYDSVWDTKPSWCQPWTI LTG 
Subjt:  SLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGS

Query:  LVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPK
         ++A SW+++ S+ V+++ + +I +WWYIFLYSYPK
Subjt:  LVIASSWLLIKSIAVTAVVLALICSWWYIFLYSYPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACCGTTTCTCTATTCCTCGCAACGTCCCTACGATCGCATCATTTTCCTTCAACACAAACCCTTCTTTCTAACTTCGCAGCTTCGTCGCAAGCCGTTTCGTTTAC
TCCCAAATGCACTAGATTCCGCCGGAAAAGCGTTGTTTTCGGGAAGCAATCAAGCAACGAGGATGAATCTCAGTTTCTAGATGAAAATGGTGCCGTCAATGATATGGATG
GATATTTGAATTACCACTCTTTCGAATATGACTCCGTTTGGGATACAAAGCCTTCTTGGTGTCAACCATGGACTATAACACTGACAGGATCACTAGTAATTGCCTCTAGC
TGGTTACTTATAAAGTCGATAGCAGTGACCGCAGTAGTACTCGCATTGATATGCTCATGGTGGTACATCTTTCTTTACTCATACCCAAAGGCTTATACTGATATGATTGC
GGAGCGAAGAAGAAAGGTTAGTGATGGAGTTGAAGACACATTTGGAGTGAAAAGGACACAGTGA
mRNA sequenceShow/hide mRNA sequence
AAAGCTTACTGGAACTCCCCAATTCGGCAGCTCAGCTCCATGCCGCCATAATCAGCAGACTACTTGGAAGTGGCCGCCATACAAAAACCCAAATCTATGGGAACCGTTTC
TCTATTCCTCGCAACGTCCCTACGATCGCATCATTTTCCTTCAACACAAACCCTTCTTTCTAACTTCGCAGCTTCGTCGCAAGCCGTTTCGTTTACTCCCAAATGCACTA
GATTCCGCCGGAAAAGCGTTGTTTTCGGGAAGCAATCAAGCAACGAGGATGAATCTCAGTTTCTAGATGAAAATGGTGCCGTCAATGATATGGATGGATATTTGAATTAC
CACTCTTTCGAATATGACTCCGTTTGGGATACAAAGCCTTCTTGGTGTCAACCATGGACTATAACACTGACAGGATCACTAGTAATTGCCTCTAGCTGGTTACTTATAAA
GTCGATAGCAGTGACCGCAGTAGTACTCGCATTGATATGCTCATGGTGGTACATCTTTCTTTACTCATACCCAAAGGCTTATACTGATATGATTGCGGAGCGAAGAAGAA
AGGTTAGTGATGGAGTTGAAGACACATTTGGAGTGAAAAGGACACAGTGATTACCACCTGCTTCTCTTCTTCTACGAGGCTTTTGCTGGCTTCTGTGTGCTACGTGCTCT
ATGATCTATAAAGAACTGTAAACGCAGGTGGTATGAGAAACATATAGCTAAGTGAACCAAGTGTTTCTTCTTCAGACTCTTAAACCAATGCATAGTTCTTTTAAAATCTT
TGATTTTAGATATGATTCATTTTGGTTCCAGGACTTTCAAAATATTCGTTTTAGTCCTTGTACTTTTAAAAAGTGATTGTTATGATCTATGTTTGCGAACTTTTTCTTTT
GTCGTAAAGTAAAAAATTAATACAAAATTCATAGTCTTCCACGTACAAGATAATTATATAACTTTTGT
Protein sequenceShow/hide protein sequence
MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQAVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASS
WLLIKSIAVTAVVLALICSWWYIFLYSYPKAYTDMIAERRRKVSDGVEDTFGVKRTQ