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Carg16843 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16843
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontitin-like isoform X2
Genome locationCarg_Chr19:230798..233773
RNA-Seq ExpressionCarg16843
SyntenyCarg16843
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571473.1 hypothetical protein SDJN03_28201, partial [Cucurbita argyrosperma subsp. sororia]6.0e-9287.67Show/hide
Query:  MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKA
        MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSET+KDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKA
Subjt:  MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKA

Query:  KQNDENPLLSESSSPIDVKYKGLYFESQKK------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG
        K NDENPLLSESSSP DVKYKGLYFESQKK                        YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG
Subjt:  KQNDENPLLSESSSPIDVKYKGLYFESQKK------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG

Query:  TGRDAERSAAKRKKITKTK
        TGRDAERSAAKRKKITKTK
Subjt:  TGRDAERSAAKRKKITKTK

KAG7011235.1 hypothetical protein SDJN02_26138 [Cucurbita argyrosperma subsp. argyrosperma]5.1e-99100Show/hide
Query:  MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKA
        MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKA
Subjt:  MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKA

Query:  KQNDENPLLSESSSPIDVKYKGLYFESQKKYEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPGTGRDAERSAAKRKKITKTK
        KQNDENPLLSESSSPIDVKYKGLYFESQKKYEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPGTGRDAERSAAKRKKITKTK
Subjt:  KQNDENPLLSESSSPIDVKYKGLYFESQKKYEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPGTGRDAERSAAKRKKITKTK

XP_022963493.1 uncharacterized protein LOC111463808 [Cucurbita moschata]3.0e-9187.21Show/hide
Query:  MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKA
        MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPF NDCIEPVIEEIAFSET+KDDEPPAEGRKHLDEPNSG+RDLHGKIDYVVKLLETQERTINALKA
Subjt:  MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKA

Query:  KQNDENPLLSESSSPIDVKYKGLYFESQKK------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG
        K NDENPLLSESSSPIDVKYKGLYFESQKK                        YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG
Subjt:  KQNDENPLLSESSSPIDVKYKGLYFESQKK------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG

Query:  TGRDAERSAAKRKKITKTK
        TGRDAERSAAKRKKITKTK
Subjt:  TGRDAERSAAKRKKITKTK

XP_022967404.1 uncharacterized protein LOC111466942 [Cucurbita maxima]4.7e-8985.39Show/hide
Query:  MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKA
        MELPDLPC+SSKKRAKKLYPSVTRRSERIRNAV PFENDCIEPVIEEIAFSET+KDDEPPAE RKHL+EPNSG+RDLHGKIDYVVKLLETQERTINALKA
Subjt:  MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKA

Query:  KQNDENPLLSESSSPIDVKYKGLYFESQKK------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG
        K NDENPLLSESSSPIDVKYKGLYFESQKK                        YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG
Subjt:  KQNDENPLLSESSSPIDVKYKGLYFESQKK------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG

Query:  TGRDAERSAAKRKKITKTK
        TGRDAERSAAKRKK+TKTK
Subjt:  TGRDAERSAAKRKKITKTK

XP_023553767.1 uncharacterized protein LOC111811239 [Cucurbita pepo subsp. pepo]1.2e-8984.93Show/hide
Query:  MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKA
        MELPDLPCTSSKKRAKKLYPSVTRRSERIRNA+TPFENDCIEPV EEIAFSET+KDDEPPAEGRKHLDEPNSG+RDLHGKIDYVVKLLETQERTINALKA
Subjt:  MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKA

Query:  KQNDENPLLSESSSPIDVKYKGLYFESQKK------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG
        K NDENPLLSESSSPIDV Y+GLYFES+KK                        YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG
Subjt:  KQNDENPLLSESSSPIDVKYKGLYFESQKK------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG

Query:  TGRDAERSAAKRKKITKTK
        TGRDAERSAAKRKK+TKTK
Subjt:  TGRDAERSAAKRKKITKTK

TrEMBL top hitse value%identityAlignment
A0A6J1DPQ4 uncharacterized protein LOC111022677 isoform X41.9e-5160.66Show/hide
Query:  TSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKAKQNDENPL
        +SSKKRAKK YPSV RRSERI+N V P++N  IEPV+EEIA S+++K+DEP A+G K LDEP S +++LHGKIDYVVKLLETQ R I            L
Subjt:  TSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKAKQNDENPL

Query:  LSESSSPIDVKYKGLYFESQKK------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPGTGRDAERS
        LSES SP +V+YK LY ESQKK                        YEKGN+N SEVLEK+KDV+LVSNLTKVTE+AVNASS+AIR+AMS G GR A+ S
Subjt:  LSESSSPIDVKYKGLYFESQKK------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPGTGRDAERS

Query:  AAKRKKITKTK
        AAK KK TKTK
Subjt:  AAKRKKITKTK

A0A6J1DQN4 uncharacterized protein LOC111022677 isoform X17.7e-5359.55Show/hide
Query:  TSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKAKQNDENPL
        +SSKKRAKK YPSV RRSERI+N V P++N  IEPV+EEIA S+++K+DEP A+G K LDEP S +++LHGKIDYVVKLLETQ R I  LK K      L
Subjt:  TSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKAKQNDENPL

Query:  LSESSSPIDVKYKGLYFESQKK---------------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSP
        LSES SP +V+YK LY ESQKK                                 YEKGN+N SEVLEK+KDV+LVSNLTKVTE+AVNASS+AIR+AMS 
Subjt:  LSESSSPIDVKYKGLYFESQKK---------------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSP

Query:  GTGRDAERSAAKRKKITKTK
        G GR A+ SAAK KK TKTK
Subjt:  GTGRDAERSAAKRKKITKTK

A0A6J1DS13 uncharacterized protein LOC111022677 isoform X37.0e-5462.09Show/hide
Query:  TSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKAKQNDENPL
        +SSKKRAKK YPSV RRSERI+N V P++N  IEPV+EEIA S+++K+DEP A+G K LDEP S +++LHGKIDYVVKLLETQ R I  LK K      L
Subjt:  TSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKAKQNDENPL

Query:  LSESSSPIDVKYKGLYFESQKK------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPGTGRDAERS
        LSES SP +V+YK LY ESQKK                        YEKGN+N SEVLEK+KDV+LVSNLTKVTE+AVNASS+AIR+AMS G GR A+ S
Subjt:  LSESSSPIDVKYKGLYFESQKK------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPGTGRDAERS

Query:  AAKRKKITKTK
        AAK KK TKTK
Subjt:  AAKRKKITKTK

A0A6J1HHY5 uncharacterized protein LOC1114638081.4e-9187.21Show/hide
Query:  MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKA
        MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPF NDCIEPVIEEIAFSET+KDDEPPAEGRKHLDEPNSG+RDLHGKIDYVVKLLETQERTINALKA
Subjt:  MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKA

Query:  KQNDENPLLSESSSPIDVKYKGLYFESQKK------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG
        K NDENPLLSESSSPIDVKYKGLYFESQKK                        YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG
Subjt:  KQNDENPLLSESSSPIDVKYKGLYFESQKK------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG

Query:  TGRDAERSAAKRKKITKTK
        TGRDAERSAAKRKKITKTK
Subjt:  TGRDAERSAAKRKKITKTK

A0A6J1HWL5 uncharacterized protein LOC1114669422.3e-8985.39Show/hide
Query:  MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKA
        MELPDLPC+SSKKRAKKLYPSVTRRSERIRNAV PFENDCIEPVIEEIAFSET+KDDEPPAE RKHL+EPNSG+RDLHGKIDYVVKLLETQERTINALKA
Subjt:  MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKA

Query:  KQNDENPLLSESSSPIDVKYKGLYFESQKK------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG
        K NDENPLLSESSSPIDVKYKGLYFESQKK                        YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG
Subjt:  KQNDENPLLSESSSPIDVKYKGLYFESQKK------------------------YEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPG

Query:  TGRDAERSAAKRKKITKTK
        TGRDAERSAAKRKK+TKTK
Subjt:  TGRDAERSAAKRKKITKTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTGCCAGACCTTCCCTGCACTTCCTCAAAGAAGAGAGCAAAGAAGTTATACCCTTCTGTTACTCGACGGTCCGAACGGATTCGGAATGCCGTTACTCCATTTGA
AAATGACTGCATCGAACCTGTGATTGAAGAAATAGCTTTTAGTGAGACTAAAAAAGATGATGAACCACCAGCTGAGGGGAGAAAGCATTTGGACGAGCCGAACTCGGGCA
AACGGGACTTGCACGGAAAGATTGATTATGTAGTTAAACTACTCGAAACTCAAGAACGAACCATAAACGCGTTGAAAGCTAAGCAGAATGATGAGAATCCATTGTTGAGT
GAAAGCTCATCACCAATAGATGTCAAATACAAGGGCTTGTACTTTGAATCCCAGAAAAAGTATGAGAAAGGGAATAGAAATATTTCTGAAGTGCTAGAGAAAATGAAGGA
TGTGATCTTAGTCTCCAATCTCACAAAAGTTACTGAATCAGCTGTCAACGCTTCTTCTCGAGCAATTCGTGATGCTATGTCTCCAGGCACGGGTCGTGATGCCGAGCGTT
CTGCAGCTAAGAGAAAGAAAATAACAAAAACAAAGTGA
mRNA sequenceShow/hide mRNA sequence
TTTCTTGGTTCGTTTAACGATGAGTTAGAGAGGGTTTGATGAAAAGACAGCGTTAAGCGTGACCTACTATTGACCATCGCCATCTTCTTCTCTCCATACTCGCTTCTTCA
AGGCTCTCGTCGGCTTCTGGGTCTGCTTTTGGTTCTACAGCTTAAGAGGTAAACCGACTCATTTTTGTCAAAGAACTTCATATCCAAAGGCACATAATCCCTCCTCCTTG
CAAATGGAGCTGCCAGACCTTCCCTGCACTTCCTCAAAGAAGAGAGCAAAGAAGTTATACCCTTCTGTTACTCGACGGTCCGAACGGATTCGGAATGCCGTTACTCCATT
TGAAAATGACTGCATCGAACCTGTGATTGAAGAAATAGCTTTTAGTGAGACTAAAAAAGATGATGAACCACCAGCTGAGGGGAGAAAGCATTTGGACGAGCCGAACTCGG
GCAAACGGGACTTGCACGGAAAGATTGATTATGTAGTTAAACTACTCGAAACTCAAGAACGAACCATAAACGCGTTGAAAGCTAAGCAGAATGATGAGAATCCATTGTTG
AGTGAAAGCTCATCACCAATAGATGTCAAATACAAGGGCTTGTACTTTGAATCCCAGAAAAAGTATGAGAAAGGGAATAGAAATATTTCTGAAGTGCTAGAGAAAATGAA
GGATGTGATCTTAGTCTCCAATCTCACAAAAGTTACTGAATCAGCTGTCAACGCTTCTTCTCGAGCAATTCGTGATGCTATGTCTCCAGGCACGGGTCGTGATGCCGAGC
GTTCTGCAGCTAAGAGAAAGAAAATAACAAAAACAAAGTGAAAAGAGCTGAAAATGTTGCATTAGTATAAACGGTCTCTCTTTCGAACACGAAAGCTCGTCCTCGTCCTC
TGTTGAGCTGTTATGTATATGTTTTTAAGACCGACTGATCTTGTTTTTCCAGTTATGACATGTTTCGGAGGTTGTTCAAACGGTATCGCCTTTCGCCCCTAAATGTATAA
GTAGTATAAAACA
Protein sequenceShow/hide protein sequence
MELPDLPCTSSKKRAKKLYPSVTRRSERIRNAVTPFENDCIEPVIEEIAFSETKKDDEPPAEGRKHLDEPNSGKRDLHGKIDYVVKLLETQERTINALKAKQNDENPLLS
ESSSPIDVKYKGLYFESQKKYEKGNRNISEVLEKMKDVILVSNLTKVTESAVNASSRAIRDAMSPGTGRDAERSAAKRKKITKTK