| GenBank top hits | e value | %identity | Alignment |
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| XP_004150106.1 small nuclear ribonucleoprotein SmD1b [Cucumis sativus] | 2.1e-52 | 98.25 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG+P+GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| XP_004242330.1 small nuclear ribonucleoprotein SmD1b [Solanum lycopersicum] | 2.1e-52 | 97.37 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVD+SMNTHLKAVK+TLKGKNPVT+DHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| XP_022931093.1 small nuclear ribonucleoprotein SmD1b [Cucurbita moschata] | 9.3e-53 | 99.12 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKP+GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| XP_022963993.1 small nuclear ribonucleoprotein SmD1b-like [Cucurbita moschata] | 4.2e-53 | 100 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| XP_022967529.1 small nuclear ribonucleoprotein SmD1a [Cucurbita maxima] | 2.1e-52 | 99.12 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKP AGKPMGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1DVC4 Small nuclear ribonucleoprotein Sm D1 | 1.0e-52 | 98.25 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG+P+GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| A0A6J1EXE6 Small nuclear ribonucleoprotein Sm D1 | 4.5e-53 | 99.12 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKP+GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| A0A6J1HJI3 Small nuclear ribonucleoprotein Sm D1 | 2.0e-53 | 100 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| A0A6J1K070 Small nuclear ribonucleoprotein Sm D1 | 4.5e-53 | 99.12 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKP+GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| A0A7S9KJJ1 SmD1a | 1.0e-52 | 97.37 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVD+SMNTHLKAVK+TLKGKNPVT+DHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P62314 Small nuclear ribonucleoprotein Sm D1 | 8.0e-39 | 75.44 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
MKLVRFLMKL++ETV+IELKNGT VHGTITGVD+SMNTHLKAVK+TLK + PV ++ LS+RGNNIRY+ILPDSL L+TLLV+ P+VK KK A GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| Q3ZC10 Small nuclear ribonucleoprotein Sm D1 | 8.0e-39 | 75.44 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
MKLVRFLMKL++ETV+IELKNGT VHGTITGVD+SMNTHLKAVK+TLK + PV ++ LS+RGNNIRY+ILPDSL L+TLLV+ P+VK KK A GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| Q4R5F6 Small nuclear ribonucleoprotein Sm D1 | 8.0e-39 | 75.44 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
MKLVRFLMKL++ETV+IELKNGT VHGTITGVD+SMNTHLKAVK+TLK + PV ++ LS+RGNNIRY+ILPDSL L+TLLV+ P+VK KK A GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| Q9SSF1 Small nuclear ribonucleoprotein SmD1a | 1.1e-51 | 91.23 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVD+SMNTHLK VK++LKGKNPVT+DHLS+RGNNIRYYILPDSLNLETLLVE+TPRVKPKKP AGK +GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| Q9SY09 Small nuclear ribonucleoprotein SmD1b | 1.7e-52 | 93.86 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGK-PMG
MKLVRFLMKLNNETVSIELKNGT+VHGTITGVD+SMNTHLKAVKLTLKGKNPVT+DHLSVRGNNIRYYILPDSLNLETLLVE+TPR+KPKKPTAGK P G
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGK-PMG
Query: RGRGRGRGRGRGRG
RGRGRGRGRGRGRG
Subjt: RGRGRGRGRGRGRG
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 8.2e-07 | 29.2 | Show/hide |
Query: VRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGRGRG
V+ L + + V++ELK+G + G++ + + N L+ + T K ++H+ +RG+ +R+ ++PD L + R+K K + G GRG
Subjt: VRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGRGRG
Query: RGR---GRGRGRG
RG+ G GRG G
Subjt: RGR---GRGRGRG
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| AT3G07590.1 Small nuclear ribonucleoprotein family protein | 7.6e-53 | 91.23 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVD+SMNTHLK VK++LKGKNPVT+DHLS+RGNNIRYYILPDSLNLETLLVE+TPRVKPKKP AGK +GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| AT3G07590.2 Small nuclear ribonucleoprotein family protein | 7.6e-53 | 91.23 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVD+SMNTHLK VK++LKGKNPVT+DHLS+RGNNIRYYILPDSLNLETLLVE+TPRVKPKKP AGK +GR
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPMGR
Query: GRGRGRGRGRGRGR
GRGRGRGRGRGRGR
Subjt: GRGRGRGRGRGRGR
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 1.2e-53 | 93.86 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGK-PMG
MKLVRFLMKLNNETVSIELKNGT+VHGTITGVD+SMNTHLKAVKLTLKGKNPVT+DHLSVRGNNIRYYILPDSLNLETLLVE+TPR+KPKKPTAGK P G
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGK-PMG
Query: RGRGRGRGRGRGRG
RGRGRGRGRGRGRG
Subjt: RGRGRGRGRGRGRG
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| AT4G02840.2 Small nuclear ribonucleoprotein family protein | 3.2e-51 | 86.29 | Show/hide |
Query: MKLVRFLMKLNNETVSIELKNGTVVHGTIT----------GVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPK
MKLVRFLMKLNNETVSIELKNGT+VHGTIT GVD+SMNTHLKAVKLTLKGKNPVT+DHLSVRGNNIRYYILPDSLNLETLLVE+TPR+KPK
Subjt: MKLVRFLMKLNNETVSIELKNGTVVHGTIT----------GVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPK
Query: KPTAGK-PMGRGRGRGRGRGRGRG
KPTAGK P GRGRGRGRGRGRGRG
Subjt: KPTAGK-PMGRGRGRGRGRGRGRG
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