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Carg16851 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16851
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc transporter 5
Genome locationCarg_Chr19:298456..298923
RNA-Seq ExpressionCarg16851
SyntenyCarg16851
Gene Ontology termsNA
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571480.1 hypothetical protein SDJN03_28208, partial [Cucurbita argyrosperma subsp. sororia]2.6e-82100Show/hide
Query:  MGRLEFAYTLAALLFVLALMIPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISPPSSPHGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSP
        MGRLEFAYTLAALLFVLALMIPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISPPSSPHGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSP
Subjt:  MGRLEFAYTLAALLFVLALMIPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISPPSSPHGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSP

Query:  IEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI
        IEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI
Subjt:  IEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI

ONH93644.1 hypothetical protein PRUPE_8G243700 [Prunus persica]2.7e-3149.4Show/hide
Query:  LEFAYTLAALLFVLALM-IPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPI---SPPSSP------------HGHGHDHDHNHDHDHGHGHHR
        +E    L   LFV +L+ +P+++AQ    PP+PLC+SQFALA+YACA LP  P PLP     PPSSP            H HGH H H H H H HGH+R
Subjt:  LEFAYTLAALLFVLALM-IPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPI---SPPSSP------------HGHGHDHDHNHDHDHGHGHHR

Query:  GHHHGHHHRSRSPIEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI
          H GHH  S SP E+ CCRW  Q+D+ECVC+ L HL  F+++P+H +TVA+ E C VTY+C   I+I
Subjt:  GHHHGHHHRSRSPIEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI

XP_020426347.1 uncharacterized protein LOC18767864 [Prunus persica]2.7e-3149.4Show/hide
Query:  LEFAYTLAALLFVLALM-IPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPI---SPPSSP------------HGHGHDHDHNHDHDHGHGHHR
        +E    L   LFV +L+ +P+++AQ    PP+PLC+SQFALA+YACA LP  P PLP     PPSSP            H HGH H H H H H HGH+R
Subjt:  LEFAYTLAALLFVLALM-IPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPI---SPPSSP------------HGHGHDHDHNHDHDHGHGHHR

Query:  GHHHGHHHRSRSPIEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI
          H GHH  S SP E+ CCRW  Q+D+ECVC+ L HL  F+++P+H +TVA+ E C VTY+C   I+I
Subjt:  GHHHGHHHRSRSPIEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI

XP_022155619.1 uncharacterized protein LOC111022709 [Momordica charantia]2.2e-4966.46Show/hide
Query:  MGRLEFAYTLAALLFVLALMIPEIDAQAWS-----YPPKPLCSSQFALASYACARLPLNPEPLPISPPSSP-HGHGHDHDHNHDHDHGHGHHRGHHHGHH
        MGR + A+ LAAL   + ++IP+++ QAWS      PP+PLCSSQFALASYACARLPLNPEP+PI PP SP    GH H H H H HGHGH   HHH   
Subjt:  MGRLEFAYTLAALLFVLALMIPEIDAQAWS-----YPPKPLCSSQFALASYACARLPLNPEPLPISPPSSP-HGHGHDHDHNHDHDHGHGHHRGHHHGHH

Query:  HRSRSPIEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI
        H + SP+ EECCRWAR+VDSECVCDAL HLANF++RPSH FTVAIT+DC+VTYSC GRIKI
Subjt:  HRSRSPIEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI

XP_022967638.1 uncharacterized protein LOC111467082 [Cucurbita maxima]6.3e-6887.1Show/hide
Query:  MGRLEFAYTLAALLFVLALMIPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISPPSSPHGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSP
        MGRLEFAY  AALLFVLALM P+I+AQAWSYPPKPLCSSQFALASYACARLPLN EPLPISPP SPH    +  H H H+HGHGHHRGHHHGHHHR+RSP
Subjt:  MGRLEFAYTLAALLFVLALMIPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISPPSSPHGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSP

Query:  IEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI
        IEEECCRWARQVD+ECVCDALAHLANFMVRPSHVFTVAITEDC+VTYSCIGRIKI
Subjt:  IEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI

TrEMBL top hitse value%identityAlignment
A0A251N5W9 Uncharacterized protein1.3e-3149.4Show/hide
Query:  LEFAYTLAALLFVLALM-IPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPI---SPPSSP------------HGHGHDHDHNHDHDHGHGHHR
        +E    L   LFV +L+ +P+++AQ    PP+PLC+SQFALA+YACA LP  P PLP     PPSSP            H HGH H H H H H HGH+R
Subjt:  LEFAYTLAALLFVLALM-IPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPI---SPPSSP------------HGHGHDHDHNHDHDHGHGHHR

Query:  GHHHGHHHRSRSPIEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI
          H GHH  S SP E+ CCRW  Q+D+ECVC+ L HL  F+++P+H +TVA+ E C VTY+C   I+I
Subjt:  GHHHGHHHRSRSPIEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI

A0A5E4EE79 PREDICTED: histidine-rich1.3e-3149.4Show/hide
Query:  LEFAYTLAALLFVLALM-IPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPI---SPPSSP------------HGHGHDHDHNHDHDHGHGHHR
        +E    L   LFV +L+ +P+++AQ    PP+PLC+SQFALA+YACA LP  P PLP     PPSSP            H HGH H H H H H HGH+R
Subjt:  LEFAYTLAALLFVLALM-IPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPI---SPPSSP------------HGHGHDHDHNHDHDHGHGHHR

Query:  GHHHGHHHRSRSPIEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI
          H GHH  S SP E+ CCRW  Q+D+ECVC+ L HL  F+++P+H +TVA+ E C VTY+C   I+I
Subjt:  GHHHGHHHRSRSPIEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI

A0A6J1DQT3 uncharacterized protein LOC1110227091.1e-4966.46Show/hide
Query:  MGRLEFAYTLAALLFVLALMIPEIDAQAWS-----YPPKPLCSSQFALASYACARLPLNPEPLPISPPSSP-HGHGHDHDHNHDHDHGHGHHRGHHHGHH
        MGR + A+ LAAL   + ++IP+++ QAWS      PP+PLCSSQFALASYACARLPLNPEP+PI PP SP    GH H H H H HGHGH   HHH   
Subjt:  MGRLEFAYTLAALLFVLALMIPEIDAQAWS-----YPPKPLCSSQFALASYACARLPLNPEPLPISPPSSP-HGHGHDHDHNHDHDHGHGHHRGHHHGHH

Query:  HRSRSPIEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI
        H + SP+ EECCRWAR+VDSECVCDAL HLANF++RPSH FTVAIT+DC+VTYSC GRIKI
Subjt:  HRSRSPIEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI

A0A6J1HVN1 uncharacterized protein LOC1114670823.0e-6887.1Show/hide
Query:  MGRLEFAYTLAALLFVLALMIPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISPPSSPHGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSP
        MGRLEFAY  AALLFVLALM P+I+AQAWSYPPKPLCSSQFALASYACARLPLN EPLPISPP SPH    +  H H H+HGHGHHRGHHHGHHHR+RSP
Subjt:  MGRLEFAYTLAALLFVLALMIPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISPPSSPHGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSP

Query:  IEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI
        IEEECCRWARQVD+ECVCDALAHLANFMVRPSHVFTVAITEDC+VTYSCIGRIKI
Subjt:  IEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI

M5W0Q1 Uncharacterized protein (Fragment)2.3e-3151.32Show/hide
Query:  LMIPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPI---SPPSSP------------HGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSPIEE
        L +P+++AQ    PP+PLC+SQFALA+YACA LP  P PLP     PPSSP            H HGH H H H H H HGH+R  H GHH  S SP E+
Subjt:  LMIPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPI---SPPSSP------------HGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSPIEE

Query:  ECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI
         CCRW  Q+D+ECVC+ L HL  F+++P+H +TVA+ E C VTY+C   I+I
Subjt:  ECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G63095.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.2e-2131.67Show/hide
Query:  PPKPLCSSQFALASYACARLPLN--PEPLPISPPSSP----------HGHGHDHDHNHDHD---------------------------------------
        PP+PLC+SQ+ALA+YAC+RLP++  P P PI+PP +P          H H HDHDH+HDHD                                       
Subjt:  PPKPLCSSQFALASYACARLPLN--PEPLPISPPSSP----------HGHGHDHDHNHDHD---------------------------------------

Query:  ----------------------------HGHGH------------------HRGHHHGHHHRSRSP--IEEECCRWARQVDSECVCDALAHLANFMVRPS
                                    H H H                  H  HHH HHHR R     ++ECC+W +Q+D+ECVCD L  L   + +P 
Subjt:  ----------------------------HGHGH------------------HRGHHHGHHHRSRSP--IEEECCRWARQVDSECVCDALAHLANFMVRPS

Query:  HVFTVAITEDCVVTYSCIGRI
        H +TV + E C+VT+ C GR+
Subjt:  HVFTVAITEDCVVTYSCIGRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCGGCTCGAATTCGCATACACATTAGCAGCATTATTGTTCGTTTTAGCTTTGATGATACCCGAGATAGATGCGCAAGCATGGTCATACCCTCCAAAACCCCTTTG
TTCTTCACAGTTTGCGCTCGCAAGCTACGCTTGTGCGAGGCTGCCTCTCAACCCAGAGCCCCTCCCAATTTCTCCGCCTTCTTCGCCCCACGGGCATGGGCACGACCACG
ACCACAACCACGACCACGACCATGGGCATGGACATCACCGTGGGCATCACCATGGGCACCACCACCGCAGCCGCTCGCCCATCGAAGAGGAATGTTGCCGATGGGCAAGG
CAAGTGGATAGCGAATGCGTGTGCGATGCATTAGCTCATTTGGCTAACTTCATGGTGCGTCCCTCACATGTGTTTACCGTGGCCATAACAGAAGATTGCGTTGTCACTTA
CTCGTGTATTGGACGAATTAAGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCGGCTCGAATTCGCATACACATTAGCAGCATTATTGTTCGTTTTAGCTTTGATGATACCCGAGATAGATGCGCAAGCATGGTCATACCCTCCAAAACCCCTTTG
TTCTTCACAGTTTGCGCTCGCAAGCTACGCTTGTGCGAGGCTGCCTCTCAACCCAGAGCCCCTCCCAATTTCTCCGCCTTCTTCGCCCCACGGGCATGGGCACGACCACG
ACCACAACCACGACCACGACCATGGGCATGGACATCACCGTGGGCATCACCATGGGCACCACCACCGCAGCCGCTCGCCCATCGAAGAGGAATGTTGCCGATGGGCAAGG
CAAGTGGATAGCGAATGCGTGTGCGATGCATTAGCTCATTTGGCTAACTTCATGGTGCGTCCCTCACATGTGTTTACCGTGGCCATAACAGAAGATTGCGTTGTCACTTA
CTCGTGTATTGGACGAATTAAGATTTGA
Protein sequenceShow/hide protein sequence
MGRLEFAYTLAALLFVLALMIPEIDAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISPPSSPHGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWAR
QVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI