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Carg16862 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16862
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr19:367704..369602
RNA-Seq ExpressionCarg16862
SyntenyCarg16862
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571489.1 Histone H1.2, partial [Cucurbita argyrosperma subsp. sororia]2.9e-0495.83Show/hide
Query:  MSDKLKPEFLHRNITFSMWPNPRM
        +SDKLKPEFLHRNITFSMWPNPRM
Subjt:  MSDKLKPEFLHRNITFSMWPNPRM
KAG7011252.1 hypothetical protein SDJN02_26156, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-63100Show/hide
Query:  MSDKLKPEFLHRNITFSMWPNPRMKMEKKLLFFRWDDVKLEMMKKFGSQNAMNSVRVRRFVQLFSLIYDKLIWSSYSQRPNFYTSCITAFVQSGCQRVIY
        MSDKLKPEFLHRNITFSMWPNPRMKMEKKLLFFRWDDVKLEMMKKFGSQNAMNSVRVRRFVQLFSLIYDKLIWSSYSQRPNFYTSCITAFVQSGCQRVIY
Subjt:  MSDKLKPEFLHRNITFSMWPNPRMKMEKKLLFFRWDDVKLEMMKKFGSQNAMNSVRVRRFVQLFSLIYDKLIWSSYSQRPNFYTSCITAFVQSGCQRVIY

Query:  ANMTGTGVSDFAVSWLHIQSST
        ANMTGTGVSDFAVSWLHIQSST
Subjt:  ANMTGTGVSDFAVSWLHIQSST
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGATAAATTGAAGCCAGAATTTCTCCATCGAAATATTACATTTTCCATGTGGCCAAACCCCAGAATGAAAATGGAGAAGAAACTGTTATTTTTCAGATGGGATGA
TGTCAAACTTGAAATGATGAAAAAGTTTGGTTCACAAAATGCCATGAATTCTGTTAGGGTTCGTAGATTCGTGCAATTGTTTTCATTGATCTACGATAAACTAATCTGGT
CATCCTATTCACAGCGACCTAATTTCTATACAAGTTGTATCACTGCATTTGTTCAGTCGGGTTGTCAAAGGGTGATTTATGCTAACATGACCGGAACTGGAGTCTCAGAT
TTTGCAGTTTCATGGCTACATATTCAGTCAAGCACATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGATAAATTGAAGCCAGAATTTCTCCATCGAAATATTACATTTTCCATGTGGCCAAACCCCAGAATGAAAATGGAGAAGAAACTGTTATTTTTCAGATGGGATGA
TGTCAAACTTGAAATGATGAAAAAGTTTGGTTCACAAAATGCCATGAATTCTGTTAGGGTTCGTAGATTCGTGCAATTGTTTTCATTGATCTACGATAAACTAATCTGGT
CATCCTATTCACAGCGACCTAATTTCTATACAAGTTGTATCACTGCATTTGTTCAGTCGGGTTGTCAAAGGGTGATTTATGCTAACATGACCGGAACTGGAGTCTCAGAT
TTTGCAGTTTCATGGCTACATATTCAGTCAAGCACATGA
Protein sequenceShow/hide protein sequence
MSDKLKPEFLHRNITFSMWPNPRMKMEKKLLFFRWDDVKLEMMKKFGSQNAMNSVRVRRFVQLFSLIYDKLIWSSYSQRPNFYTSCITAFVQSGCQRVIYANMTGTGVSD
FAVSWLHIQSST