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Carg16867 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16867
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionbet1-like SNARE 1-1
Genome locationCarg_Chr19:505408..507898
RNA-Seq ExpressionCarg16867
SyntenyCarg16867
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR000727 - Target SNARE coiled-coil homology domain
IPR039897 - BET1-like protein
IPR039899 - BET1, SNARE domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151976.1 bet1-like SNARE 1-1 [Cucumis sativus]3.9e-5797.56Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVALFDGIEEGGVRAS SYSSHEIEEHDNEAAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
        RPKMFSLVALFV IFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

XP_008454511.1 PREDICTED: bet1-like SNARE 1-1 [Cucumis melo]8.8e-5796.75Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVALFDGIEEGGVRAS SY+SHEIEEHDNEAAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
        RPKMFSLVALFV IFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

XP_022146012.1 bet1-like SNARE 1-1 [Momordica charantia]8.8e-5796.75Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRE+RNNRVALFDGIEEGGVRASSS+SSHEIEEHDNEAAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
         PKMFSLVALFVAIFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

XP_022963635.1 bet1-like SNARE 1-1 [Cucurbita moschata]4.2e-59100Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
        RPKMFSLVALFVAIFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

XP_038887294.1 bet1-like SNARE 1-1 [Benincasa hispida]1.4e-5798.37Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
         PKMFSLVALFVAIFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

TrEMBL top hitse value%identityAlignment
A0A0A0LBA5 t-SNARE coiled-coil homology domain-containing protein1.9e-5797.56Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVALFDGIEEGGVRAS SYSSHEIEEHDNEAAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
        RPKMFSLVALFV IFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

A0A5A7VLV2 Bet1-like SNARE 1-14.3e-5796.75Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVALFDGIEEGGVRAS SY+SHEIEEHDNEAAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
        RPKMFSLVALFV IFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

A0A6J1CYB1 bet1-like SNARE 1-14.3e-5796.75Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRE+RNNRVALFDGIEEGGVRASSS+SSHEIEEHDNEAAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
         PKMFSLVALFVAIFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

A0A6J1HIJ8 bet1-like SNARE 1-12.0e-59100Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
        RPKMFSLVALFVAIFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

A0A6J1HRZ5 bet1-like SNARE 1-12.0e-59100Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
        RPKMFSLVALFVAIFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

SwissProt top hitse value%identityAlignment
O35152 BET1-like protein1.5e-0635Show/hide
Query:  RASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTV--FDPKSRPKMFSLVALFVAIFFIVYYL
        RA SS +  EI + +N+     L  +V  LK L  DI+ + E  NR LD M +D  S  G+L+G++ RF TV      +R  +  +  + +  FFI+ YL
Subjt:  RASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTV--FDPKSRPKMFSLVALFVAIFFIVYYL

Q3MHP8 BET1-like protein9.6e-0635.92Show/hide
Query:  RASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSRPKMFSLVA--LFVAIFFIVYY
        RA S  +  EI + +N+     L  +V  LK L  DI+ + E  NR LD M +D  S  G+L+G++ RF T+    +   K+   VA  L VA F + Y 
Subjt:  RASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSRPKMFSLVA--LFVAIFFIVYY

Query:  LTR
        L+R
Subjt:  LTR

Q5RBX2 BET1-like protein3.3e-0634.95Show/hide
Query:  RASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSRPKMF--SLVALFVAIFFIVYY
        RA S  +  EI + +N+     L  +V  LK L  DI+++ E  NR LD M +D  S  G+L+G++ RF T+    +   K+     V L VA F + Y+
Subjt:  RASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSRPKMF--SLVALFVAIFFIVYY

Query:  LTR
        L+R
Subjt:  LTR

Q94CG2 Bet1-like SNARE 1-21.7e-3158.73Show/hide
Query:  MNARRELRNNRVALF---DGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFD
        MN RRE R +R +LF   DG+EEG +RASSSY+    +E DN+ AL  LQDRV  LKR+TGDI+EEVE+HNR+LD++GN MDS+RG++SGT++RFK VF+
Subjt:  MNARRELRNNRVALF---DGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFD

Query:  PKSRPKMFSLVALFVAIFFIVYYLTR
         KS  K   L+A FV +F I+YYL R
Subjt:  PKSRPKMFSLVALFVAIFFIVYYLTR

Q9M2J9 Bet1-like SNARE 1-11.4e-4474.8Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MN RRE R  R +LFDGIEEGG+RA+SSY SHEI EH+NE AL GLQDRV+LLKRL+GDINEEV++HNRMLDRMGNDMDSSRG LSGTMDRFKTVF+ KS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
          +M +LVA FV +F ++YYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

Arabidopsis top hitse value%identityAlignment
AT3G58170.1 BET1P/SFT1P-like protein 14A9.7e-4674.8Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MN RRE R  R +LFDGIEEGG+RA+SSY SHEI EH+NE AL GLQDRV+LLKRL+GDINEEV++HNRMLDRMGNDMDSSRG LSGTMDRFKTVF+ KS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
          +M +LVA FV +F ++YYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

AT4G14455.1 Target SNARE coiled-coil domain protein1.2e-3258.73Show/hide
Query:  MNARRELRNNRVALF---DGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFD
        MN RRE R +R +LF   DG+EEG +RASSSY+    +E DN+ AL  LQDRV  LKR+TGDI+EEVE+HNR+LD++GN MDS+RG++SGT++RFK VF+
Subjt:  MNARRELRNNRVALF---DGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFD

Query:  PKSRPKMFSLVALFVAIFFIVYYLTR
         KS  K   L+A FV +F I+YYL R
Subjt:  PKSRPKMFSLVALFVAIFFIVYYLTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGCGAGAAGGGAATTGCGCAACAATAGGGTTGCTCTCTTCGATGGCATTGAGGAGGGTGGTGTTAGGGCCTCATCTTCATACTCCTCCCATGAAATTGAGGAGCA
TGATAATGAAGCAGCATTAGGAGGCTTGCAAGACAGAGTCCTCCTGTTGAAGAGGTTGACAGGTGACATAAATGAGGAGGTGGAGAGTCATAACCGCATGCTTGATAGGA
TGGGCAATGATATGGATTCATCAAGAGGAGTGTTGTCGGGCACTATGGATCGATTCAAGACGGTATTTGATCCCAAGTCAAGACCGAAGATGTTCTCACTAGTCGCACTT
TTCGTGGCAATTTTCTTCATCGTGTACTATCTCACAAGGTAA
mRNA sequenceShow/hide mRNA sequence
TTTAAGATTTTAGAAACTAAATTTATTAGGTTGAAAGTTTGATATTCGTTACCATTAATGTGTTCAATATATATCTCTTACTCCCCGTCAAGATTCGCCGATCGTCTCCA
TTTGTCACCGTTTCCAGTTCAGACCCTCCGTCAATTCTCGAACTTTCAGGCTTCAGCTATCCGATAATTGGTTCTGGAAAGTGCGTAGGCAACAGATCGAGAAATCTTTG
ATTCGAATTCAAGAACGCGCAGGGTTGGGCGTGGATTCTGTTTCGTTCCGGGAGAGTCATGAACGCGAGAAGGGAATTGCGCAACAATAGGGTTGCTCTCTTCGATGGCA
TTGAGGAGGGTGGTGTTAGGGCCTCATCTTCATACTCCTCCCATGAAATTGAGGAGCATGATAATGAAGCAGCATTAGGAGGCTTGCAAGACAGAGTCCTCCTGTTGAAG
AGGTTGACAGGTGACATAAATGAGGAGGTGGAGAGTCATAACCGCATGCTTGATAGGATGGGCAATGATATGGATTCATCAAGAGGAGTGTTGTCGGGCACTATGGATCG
ATTCAAGACGGTATTTGATCCCAAGTCAAGACCGAAGATGTTCTCACTAGTCGCACTTTTCGTGGCAATTTTCTTCATCGTGTACTATCTCACAAGGTAATCCTCCTGTC
TGGATATTGAAAATACTCGAGGTTTGCCCGGAAGACAATGATCACTATTGCTGCTTAGTTCTACCAGTATTATTACCTGTAAGTTTGGCATAGATGTTCTGTTGTTGATG
CCTGTGTGAATATGTTTCCTTGTACCAAACAAAAGTTGAATGAGTTTATCATGTGCTGCTCTTTAGTGAGCCGACGTTGATGGGGAGATATATAATCAGCAAACCAGTTT
GTTAGTTGGGAGTTTTATATCCTCCTTGCCTTATTTAGATTATCCGAAGCTATCA
Protein sequenceShow/hide protein sequence
MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVAL
FVAIFFIVYYLTR