; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16883 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16883
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionArabinose 5-phosphate isomerase
Genome locationCarg_Chr19:645392..646201
RNA-Seq ExpressionCarg16883
SyntenyCarg16883
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:1901135 - carbohydrate derivative metabolic process (biological process)
GO:0016853 - isomerase activity (molecular function)
GO:0097367 - carbohydrate derivative binding (molecular function)
InterPro domainsIPR000644 - CBS domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571529.1 putative arabinose 5-phosphate isomerase, partial [Cucurbita argyrosperma subsp. sororia]5.6e-52100Show/hide
Query:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG
        MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG
Subjt:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG

Query:  LVSAGL
        LVSAGL
Subjt:  LVSAGL

KAG7011273.1 putative arabinose 5-phosphate isomerase, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-52100Show/hide
Query:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG
        MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG
Subjt:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG

Query:  LVSAGL
        LVSAGL
Subjt:  LVSAGL

XP_022963934.1 probable arabinose 5-phosphate isomerase [Cucurbita moschata]5.6e-52100Show/hide
Query:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG
        MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG
Subjt:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG

Query:  LVSAGL
        LVSAGL
Subjt:  LVSAGL

XP_022967433.1 probable arabinose 5-phosphate isomerase [Cucurbita maxima]1.4e-5098.11Show/hide
Query:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG
        MDQLVELTSKGCGCLLVIDEE+HLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQ MLIGIITLHG
Subjt:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG

Query:  LVSAGL
        LVSAGL
Subjt:  LVSAGL

XP_023554677.1 probable arabinose 5-phosphate isomerase [Cucurbita pepo subsp. pepo]6.2e-5198.11Show/hide
Query:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG
        MDQLVELTSKGCGCLLVID+E+HLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG
Subjt:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG

Query:  LVSAGL
        LVSAGL
Subjt:  LVSAGL

TrEMBL top hitse value%identityAlignment
A0A5A7T8R2 Putative arabinose 5-phosphate isomerase3.1e-4892.45Show/hide
Query:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG
        MDQLVELTSKGCGCLLVID+E+ LIGTFTDGDLRRTLKASGEAIFKLTVG+MCNR PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQ +LIGI+TLHG
Subjt:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG

Query:  LVSAGL
        LVSAGL
Subjt:  LVSAGL

A0A6J1ESW7 probable arabinose 5-phosphate isomerase1.8e-4893.4Show/hide
Query:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG
        MDQLVELTSKGCGCLLVIDEE+HLIGTFTDGDLRRTLKASGE IFKLTVGQMCNR PRTIDPEAMAVDAMKKMEAPPSPVQFLPVIN Q MLIGI+TLHG
Subjt:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG

Query:  LVSAGL
        LVS+GL
Subjt:  LVSAGL

A0A6J1HLM5 probable arabinose 5-phosphate isomerase2.7e-52100Show/hide
Query:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG
        MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG
Subjt:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG

Query:  LVSAGL
        LVSAGL
Subjt:  LVSAGL

A0A6J1HV28 probable arabinose 5-phosphate isomerase6.7e-5198.11Show/hide
Query:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG
        MDQLVELTSKGCGCLLVIDEE+HLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQ MLIGIITLHG
Subjt:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG

Query:  LVSAGL
        LVSAGL
Subjt:  LVSAGL

A0A6J1K051 probable arabinose 5-phosphate isomerase1.8e-4893.4Show/hide
Query:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG
        MDQLVELTSKGCGCLLVIDEE+HLIGTFTDGDLRRTLKASGE IFKLTVGQMCNR PRTIDPEAMAVDAMKKMEAPPSPVQFLPVIN Q MLIGI+TLHG
Subjt:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG

Query:  LVSAGL
        LVS+GL
Subjt:  LVSAGL

SwissProt top hitse value%identityAlignment
O67500 Uncharacterized phosphosugar isomerase aq_15461.3e-1135.24Show/hide
Query:  DQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHGL
        + ++E+T+KG G   V++EE  L+G  TDGDLRR +   G +        +  +NP+TI P+ +A+ A++KME     +  L V+N++   IGI+ +H +
Subjt:  DQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHGL

Query:  VSAGL
        + A L
Subjt:  VSAGL

O84404 Uncharacterized protein CT_3995.3e-1338.32Show/hide
Query:  DQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVIN--QQAMLIGIITLH
        + L  L+S G GC+ V++E   L+G FTDGDLRR L   G  I    + Q+  RNP+ I  ++  + +++ ME+  +PV  LPV++  QQ  ++G++ +H
Subjt:  DQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVIN--QQAMLIGIITLH

Query:  GLVSAGL
         L  AGL
Subjt:  GLVSAGL

Q9M1T1 Probable arabinose 5-phosphate isomerase4.8e-4683.96Show/hide
Query:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG
        MDQLVELTSKGCGCLLV+DE   LIGTFTDGDLRRTLKASGEAIFKL+VG+MCNR PRTI PE MAV+AMKKME+PPSPVQFLPV+N+   LIGI+TLHG
Subjt:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG

Query:  LVSAGL
        LVSAGL
Subjt:  LVSAGL

Q9PJZ7 Uncharacterized protein TC_06795.3e-1337.38Show/hide
Query:  DQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVIN--QQAMLIGIITLH
        + L  L+S G GC+ V++E+  L+G FTDGDLRR L   G AI +  + Q+  R P+ I  ++  +  ++ ME+  +PV  LPV++   Q  ++G++ +H
Subjt:  DQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVIN--QQAMLIGIITLH

Query:  GLVSAGL
         L  AGL
Subjt:  GLVSAGL

Q9Z826 Uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB05472.6e-1237.76Show/hide
Query:  GCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVIN--QQAMLIGIITLHGLVSAGL
        GCGC+ ++D +  L+G FTDGDLRR+L + G  +  L++ ++   NPR I  ++    A++ ME+  SPV  LPV++  +   + G++ +H L  AGL
Subjt:  GCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVIN--QQAMLIGIITLHGLVSAGL

Arabidopsis top hitse value%identityAlignment
AT3G54690.1 Sugar isomerase (SIS) family protein3.4e-4783.96Show/hide
Query:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG
        MDQLVELTSKGCGCLLV+DE   LIGTFTDGDLRRTLKASGEAIFKL+VG+MCNR PRTI PE MAV+AMKKME+PPSPVQFLPV+N+   LIGI+TLHG
Subjt:  MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHG

Query:  LVSAGL
        LVSAGL
Subjt:  LVSAGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAATTAGTGGAGCTTACGAGCAAAGGATGCGGCTGCCTACTTGTCATAGATGAGGAACATCACCTGATTGGGACATTCACAGATGGTGATTTGCGGCGCACTCT
CAAAGCTAGTGGTGAAGCCATCTTCAAGCTCACCGTAGGCCAAATGTGCAACAGGAACCCGAGAACGATCGATCCCGAGGCGATGGCGGTCGACGCAATGAAAAAGATGG
AAGCACCGCCATCTCCTGTGCAATTTCTGCCTGTTATCAATCAGCAAGCTATGTTGATTGGCATTATCACATTACATGGCCTAGTTTCTGCAGGACTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCAATTAGTGGAGCTTACGAGCAAAGGATGCGGCTGCCTACTTGTCATAGATGAGGAACATCACCTGATTGGGACATTCACAGATGGTGATTTGCGGCGCACTCT
CAAAGCTAGTGGTGAAGCCATCTTCAAGCTCACCGTAGGCCAAATGTGCAACAGGAACCCGAGAACGATCGATCCCGAGGCGATGGCGGTCGACGCAATGAAAAAGATGG
AAGCACCGCCATCTCCTGTGCAATTTCTGCCTGTTATCAATCAGCAAGCTATGTTGATTGGCATTATCACATTACATGGCCTAGTTTCTGCAGGACTGTGAGTGGCATAT
GTCTCCCATTTCTTTGTCTGCATTAGAGGTTTCTATTTTTTGTGCAACACTGTTCATCATTGATAGCCCTGTCTAAGTGTAGTGATTACATAAGTGTAAGAAAACTCGAT
ACGTAGAGGATGAATCATGTCGTTTTCATATATTTGTCTTTATAGGGCATGTGAGAACCATTACTACTCTCGAAAACTCTCGAAAACATAGGTCAACGGATTTAGGCATA
TAACCTTGAGAAAGATGCTAGAAGTTTAAATATTTCTGATACGGATAGTGTTGAGCTTAGAATGAAGATGTTCGATCGTAAATCTCTCCACCATATACACATACTCAAGT
GAAAAATAAGTTAGATTCTACACGACCTGTAATGGCCCAAACCCACCTCTAGC
Protein sequenceShow/hide protein sequence
MDQLVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRNPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHGLVSAGL