; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16939 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16939
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNuclear transcription factor Y subunit
Genome locationCarg_Chr10:4806683..4809593
RNA-Seq ExpressionCarg16939
SyntenyCarg16939
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450422.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo]2.6e-11987.08Show/hide
Query:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPST+IYYEPW   MGY+ FPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +
Subjt:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS LPAMHGE LTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQP+GYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE---------------SSEQQHGSSLTIKASE
        KK IKARKPYLHESRHQHAIRRSRSSGGRFAKK+EADGKE                SEQQ GSSL  KASE
Subjt:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE---------------SSEQQHGSSLTIKASE

XP_008450423.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo]2.6e-11987.08Show/hide
Query:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPST+IYYEPW   MGY+ FPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +
Subjt:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS LPAMHGE LTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQP+GYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE---------------SSEQQHGSSLTIKASE
        KK IKARKPYLHESRHQHAIRRSRSSGGRFAKK+EADGKE                SEQQ GSSL  KASE
Subjt:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE---------------SSEQQHGSSLTIKASE

XP_022961152.1 nuclear transcription factor Y subunit A-1-like [Cucurbita moschata]4.0e-136100Show/hide
Query:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
Subjt:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESSEQQHGSSLTIKASE
        KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESSEQQHGSSLTIKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESSEQQHGSSLTIKASE

XP_022988191.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita maxima]1.5e-13599.61Show/hide
Query:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
Subjt:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSSNLPAMHGE LTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESSEQQHGSSLTIKASE
        KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESSEQQHGSSLTIKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESSEQQHGSSLTIKASE

XP_038879324.1 nuclear transcription factor Y subunit A-1-like [Benincasa hispida]2.1e-12189.14Show/hide
Query:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPST+IYYEPW   MGY+ FPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
Subjt:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS LPAMHGE LTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQP+GYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGK-----------ESSEQQHGSSLTIKASE
        KK IKARKPYLHESRHQHAIRRSRSSGGRFAKKNE DGK           E SEQQ+GSSLT +ASE
Subjt:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGK-----------ESSEQQHGSSLTIKASE

TrEMBL top hitse value%identityAlignment
A0A1S3BP85 Nuclear transcription factor Y subunit1.3e-11987.08Show/hide
Query:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPST+IYYEPW   MGY+ FPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +
Subjt:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS LPAMHGE LTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQP+GYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE---------------SSEQQHGSSLTIKASE
        KK IKARKPYLHESRHQHAIRRSRSSGGRFAKK+EADGKE                SEQQ GSSL  KASE
Subjt:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE---------------SSEQQHGSSLTIKASE

A0A1S3BPV3 Nuclear transcription factor Y subunit1.3e-11987.08Show/hide
Query:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPST+IYYEPW   MGY+ FPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +
Subjt:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS LPAMHGE LTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQP+GYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE---------------SSEQQHGSSLTIKASE
        KK IKARKPYLHESRHQHAIRRSRSSGGRFAKK+EADGKE                SEQQ GSSL  KASE
Subjt:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE---------------SSEQQHGSSLTIKASE

A0A5D3D5Q2 Nuclear transcription factor Y subunit1.3e-11987.08Show/hide
Query:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQL  DPNGAPST+IYYEPW   MGY+ FPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +
Subjt:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSS LPAMHGE LTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQP+GYPMVG PHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE---------------SSEQQHGSSLTIKASE
        KK IKARKPYLHESRHQHAIRRSRSSGGRFAKK+EADGKE                SEQQ GSSL  KASE
Subjt:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKE---------------SSEQQHGSSLTIKASE

A0A6J1H9E2 Nuclear transcription factor Y subunit1.9e-136100Show/hide
Query:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
Subjt:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESSEQQHGSSLTIKASE
        KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESSEQQHGSSLTIKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESSEQQHGSSLTIKASE

A0A6J1JCE0 Nuclear transcription factor Y subunit7.3e-13699.61Show/hide
Query:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
        MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ
Subjt:  MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQ

Query:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
        KMQHVSSNLPAMHGE LTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAE

Query:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESSEQQHGSSLTIKASE
        KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESSEQQHGSSLTIKASE
Subjt:  KKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESSEQQHGSSLTIKASE

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-73.6e-2344.38Show/hide
Query:  GSYRQDAQKMQHVSSNLP-AMHGESLTQSTQLELVG--HSIACASNPYQDPYYGGMMA--FYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGI
        GS+ +  Q+  H    +P A + ES+  S      G  +S+A    PY DPYY  + A     +  V   ++G     +PLP +  ++PVFVNAKQY GI
Subjt:  GSYRQDAQKMQHVSSNLP-AMHGESLTQSTQLELVG--HSIACASNPYQDPYYGGMMA--FYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGI

Query:  LRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRF--AKKNEADGKESSEQQ
        LRRRQ+RA+ E++ K+IK+RKPYLHESRH HAIRR R  GGRF  AKK +   ++SS ++
Subjt:  LRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRF--AKKNEADGKESSEQQ

Q8VY64 Nuclear transcription factor Y subunit A-46.2e-2346.79Show/hide
Query:  RQDAQKMQHVSSNLPAMHGESL-TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYP-----MVGAPHARMPLPIEIAQDPVFVNAKQYQGILR
        R D+Q    V S       ES+ T S   E + H +     PY DPYY  + A   + P  YP     ++G     +PL  +  ++PVFVNAKQY GILR
Subjt:  RQDAQKMQHVSSNLPAMHGESL-TQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYP-----MVGAPHARMPLPIEIAQDPVFVNAKQYQGILR

Query:  RRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRF--AKKNEADGKESSE
        RRQ+RAK EA  + IKA+KPY+HESRH HAIRR R  GGRF  AKK   D KE  E
Subjt:  RRQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRF--AKKNEADGKESSE

Q93ZH2 Nuclear transcription factor Y subunit A-35.4e-1933.09Show/hide
Query:  NQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSN
        +Q+ +  + A  +T+ Y    +S+ +   P   V     S+ SL       +S  G   +   ++ ++ D S   Q+TG  ++  +   D    + +S  
Subjt:  NQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSN

Query:  LPAMHGESLTQ-------STQLELVG----HSIACASN---PYQDPYYGGMMA--FYGHQPVGYP-MVGAPHARMPLPIEIAQ-DPVFVNAKQYQGILRR
          A  G  +TQ         Q  + G    H     +N    Y DP+YGG++A  +    P   P MV     R+PLP E+ + DPVFVNAKQY  I+RR
Subjt:  LPAMHGESLTQ-------STQLELVG----HSIACASN---PYQDPYYGGMMA--FYGHQPVGYP-MVGAPHARMPLPIEIAQ-DPVFVNAKQYQGILRR

Query:  RQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRF-------AKKNEADGKESSEQQHGSSLTIKAS
        RQ RAK EA+ KLI+ARKPYLHESRH HA++R R SGGRF        +  +A  +E  + + G  +  K +
Subjt:  RQARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRF-------AKKNEADGKESSEQQHGSSLTIKAS

Q945M9 Nuclear transcription factor Y subunit A-98.8e-4650Show/hide
Query:  MQSKSET-NNQLQSDPNGAPSTTI-YYEPWCSSMGYSPFPLPVVGGNASS-STSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ
        M SKS++  N++ S+ +G  S++I    PW  +         V  G+ SS S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLQSDPNGAPSTTI-YYEPWCSSMGYSPFPLPVVGGNASS-STSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ

Query:  DAQKMQHVSSNLPAMHGESLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
          Q+  H     P  H          +LVGH++  A SNPYQDPYY G+M  YGH P+G+ P  G PH+RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DAQKMQHVSSNLPAMHGESLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKK--NEADGKESSEQQHG
        KAE EKKLIK+RKPYLHESRHQHA+RR R +GGRFAKK   EA  +++ E+ +G
Subjt:  KAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKK--NEADGKESSEQQHG

Q9LXV5 Nuclear transcription factor Y subunit A-12.1e-4746.18Show/hide
Query:  MQSKSETNNQLQ-SDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + ++ +      +Y EPW  +  +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLQ-SDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ +G+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESS---EQQHGSSLTIKASE
        E E+K+I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E +  E +   +++ GS+     SE
Subjt:  EAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESS---EQQHGSSLTIKASE

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A96.3e-4750Show/hide
Query:  MQSKSET-NNQLQSDPNGAPSTTI-YYEPWCSSMGYSPFPLPVVGGNASS-STSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ
        M SKS++  N++ S+ +G  S++I    PW  +         V  G+ SS S +L       ESN  +S SN D     + V+KE Q T SP SAG Y  
Subjt:  MQSKSET-NNQLQSDPNGAPSTTI-YYEPWCSSMGYSPFPLPVVGGNASS-STSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQ

Query:  DAQKMQHVSSNLPAMHGESLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA
          Q+  H     P  H          +LVGH++  A SNPYQDPYY G+M  YGH P+G+ P  G PH+RMPLP E+AQ+PVFVNAKQYQ ILRRRQARA
Subjt:  DAQKMQHVSSNLPAMHGESLTQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARA

Query:  KAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKK--NEADGKESSEQQHG
        KAE EKKLIK+RKPYLHESRHQHA+RR R +GGRFAKK   EA  +++ E+ +G
Subjt:  KAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKK--NEADGKESSEQQHG

AT5G12840.1 nuclear factor Y, subunit A11.5e-4846.18Show/hide
Query:  MQSKSETNNQLQ-SDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + ++ +      +Y EPW  +  +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLQ-SDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ +G+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESS---EQQHGSSLTIKASE
        E E+K+I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E +  E +   +++ GS+     SE
Subjt:  EAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESS---EQQHGSSLTIKASE

AT5G12840.2 nuclear factor Y, subunit A13.3e-4847.57Show/hide
Query:  MQSKSETNNQLQ-SDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + ++ +      +Y EPW  +  +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA      A S R D
Subjt:  MQSKSETNNQLQ-SDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSNLPA-----MHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQ
           M+    N PA     MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ +G+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+
Subjt:  AQKMQHVSSNLPA-----MHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQ

Query:  ARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESS---EQQHGSSLTIKASE
        ARAKAE E+K+I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E +  E +   +++ GS+     SE
Subjt:  ARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESS---EQQHGSSLTIKASE

AT5G12840.3 nuclear factor Y, subunit A11.5e-4846.18Show/hide
Query:  MQSKSETNNQLQ-SDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + ++ +      +Y EPW  +  +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA  S  S  ++  +
Subjt:  MQSKSETNNQLQ-SDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA
               + ++  MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ +G+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQHVSSNLPAMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKA

Query:  EAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESS---EQQHGSSLTIKASE
        E E+K+I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E +  E +   +++ GS+     SE
Subjt:  EAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESS---EQQHGSSLTIKASE

AT5G12840.4 nuclear factor Y, subunit A13.3e-4847.57Show/hide
Query:  MQSKSETNNQLQ-SDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD
        MQSK    N+ + ++ +      +Y EPW  +  +   P     G  S+S+SL+ PN GSESND  S S +  +N E D   K+ QA      A S R D
Subjt:  MQSKSETNNQLQ-SDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQD

Query:  AQKMQHVSSNLPA-----MHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQ
           M+    N PA     MH + L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ +G+ P +G P  R  LP+++AQ+PV+VNAKQY+GILRRR+
Subjt:  AQKMQHVSSNLPA-----MHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGY-PMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQ

Query:  ARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESS---EQQHGSSLTIKASE
        ARAKAE E+K+I+ RKPYLHESRH+HA+RR+R+SGGRFAKK+E +  E +   +++ GS+     SE
Subjt:  ARAKAEAEKKLIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEADGKESS---EQQHGSSLTIKASE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAAAGTCAGAAACCAATAATCAGCTCCAATCTGATCCAAATGGTGCTCCATCCACGACTATCTATTATGAACCCTGGTGCAGTTCTATGGGGTACAGTCCTTT
TCCGTTACCTGTGGTTGGGGGAAATGCTTCCAGTTCGACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAATCTGTGTCTAATAATGATGTAAACG
ACGAAGAAGATGATGTTTCCAAAGAAGTGCAAGCTACTGGATCTCCTCATTCTGCAGGAAGCTACAGACAGGATGCTCAGAAGATGCAGCATGTCTCATCCAATTTGCCA
GCTATGCACGGTGAAAGTCTGACACAGTCGACACAACTTGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCCTATCAGGATCCATATTATGGGGGAATGATGGC
TTTCTATGGGCATCAGCCCGTGGGCTATCCTATGGTCGGAGCGCCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCAAAGCAAT
ACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCCGAGGCTGAAAAGAAGTTGATAAAAGCTAGAAAGCCATACCTTCACGAGTCTAGACACCAGCATGCCATA
AGAAGGTCGAGGAGCAGTGGAGGGCGTTTTGCGAAGAAAAATGAAGCTGATGGAAAGGAGAGTTCTGAACAGCAGCACGGAAGCTCCTTGACAATCAAGGCCTCTGAGTA
G
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCAAAGTCAGAAACCAATAATCAGCTCCAATCTGATCCAAATGGTGCTCCATCCACGACTATCTATTATGAACCCTGGTGCAGTTCTATGGGGTACAGTCCTTT
TCCGTTACCTGTGGTTGGGGGAAATGCTTCCAGTTCGACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCAAATGATGGCCAATCTGTGTCTAATAATGATGTAAACG
ACGAAGAAGATGATGTTTCCAAAGAAGTGCAAGCTACTGGATCTCCTCATTCTGCAGGAAGCTACAGACAGGATGCTCAGAAGATGCAGCATGTCTCATCCAATTTGCCA
GCTATGCACGGTGAAAGTCTGACACAGTCGACACAACTTGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCCTATCAGGATCCATATTATGGGGGAATGATGGC
TTTCTATGGGCATCAGCCCGTGGGCTATCCTATGGTCGGAGCGCCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTCGTGAATGCAAAGCAAT
ACCAAGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCCGAGGCTGAAAAGAAGTTGATAAAAGCTAGAAAGCCATACCTTCACGAGTCTAGACACCAGCATGCCATA
AGAAGGTCGAGGAGCAGTGGAGGGCGTTTTGCGAAGAAAAATGAAGCTGATGGAAAGGAGAGTTCTGAACAGCAGCACGGAAGCTCCTTGACAATCAAGGCCTCTGAGTA
GCAAACCTGCACCAGGCACTGGAGGTGAACGCCAAGACAATGACCAAAATTGGATCAGGGGGACGGGGGATCGTCGATCGCTTGTTCGTGCTTGTTTGTTGAAGTATTAC
TGCGTTCCTGGCAAGCGCGCTAGGCGGCAAATCATTCTTGGCTTTGATCTGTTGTTGTTGTGAAGGGGTAATAAAAGAAAGAATGTGGAATGATATGTGTGACTCGCAGG
ATTAGTTGAAAGTCCAAGAGCTTTCTTCATTCCACTCTTCTTGTTTGCCTTTTATTGTACAGAGTTTGTGGGAACTTTGACCTCTTGTATTGTATAGTAGGAGTGAAACT
AAATGAATCTTAAGGCTTAGGAAACTTATAGATTGTTATTCACAAAGCTTACGCTTTAAAGATTTTAGTTTTTAATATCCGAAGTTGGCAGATTATTGGTGCGTGCGGGT
GCGGATTACTTTTAGTGCTCGACAACGAAAATCGTTATCTATACTCTTTAACTGTGTATCTCGTCTTAATAATATTTTAGAACTTTCGAAAGTTTCTTTTTTACCATTAG
GATATGGATGAAAACAATTTATTTACATTCCAGGTTCCATCGCCTTCTCTTCAATCTCTTTCTTCTATTCTTTTATCTCGAGAACTAATAAATAAACAAAATGAGCTCTT
TCATTTCTATACTAAACTCATTTAGATATGCTCTCTTCAAAACTTGATAGAAAGA
Protein sequenceShow/hide protein sequence
MQSKSETNNQLQSDPNGAPSTTIYYEPWCSSMGYSPFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSNLP
AMHGESLTQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPVGYPMVGAPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAI
RRSRSSGGRFAKKNEADGKESSEQQHGSSLTIKASE