; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16954 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16954
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRho GTPase-activating gacO-like protein
Genome locationCarg_Chr10:5085273..5085689
RNA-Seq ExpressionCarg16954
SyntenyCarg16954
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590227.1 hypothetical protein SDJN03_15650, partial [Cucurbita argyrosperma subsp. sororia]6.8e-66100Show/hide
Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

XP_022960708.1 uncharacterized protein LOC111461426 [Cucurbita moschata]2.0e-6599.28Show/hide
Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRK TVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

XP_022988232.1 uncharacterized protein LOC111485534 [Cucurbita maxima]3.7e-6497.1Show/hide
Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRKLT+TNHDDAGSGEEEKIPAQKRRGRPQKPLKDE+DEEE EKIEDDDSENVKGCDIVSKEMK PPAAENGKRRRRSSQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

XP_023516906.1 uncharacterized protein LOC111780671 [Cucurbita pepo subsp. pepo]2.6e-6599.28Show/hide
Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE EKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

XP_038879962.1 uncharacterized protein LOC120071662 [Benincasa hispida]3.0e-6194.2Show/hide
Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDDAGSGEEEKIP QKRRGRPQKPLKDEIDEEE EKIED+DSEN+KG DIVSKEMKSPPAAENGKRRRR+SQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKP RAAEAGVNC+
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

TrEMBL top hitse value%identityAlignment
A0A0A0LXE8 Uncharacterized protein4.2e-6193.48Show/hide
Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE EKIED+DSEN+KG DIVSKEMK+PPAAENGKRRRR+SQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKP RAAEAGV+C+
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

A0A1S3BRW6 uncharacterized protein LOC1034925114.2e-6193.48Show/hide
Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE EKIED+DSEN+KG DIVSKEMK+PPAAENGKRRRR+SQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKP RAAEAGV+C+
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

A0A5A7TJZ9 Uncharacterized protein4.2e-6193.48Show/hide
Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEE EKIED+DSEN+KG DIVSKEMK+PPAAENGKRRRR+SQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKP RAAEAGV+C+
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

A0A6J1H9S1 uncharacterized protein LOC1114614269.6e-6699.28Show/hide
Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRK TVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

A0A6J1JCI2 uncharacterized protein LOC1114855341.8e-6497.1Show/hide
Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        MGRGRGKGRKLT+TNHDDAGSGEEEKIPAQKRRGRPQKPLKDE+DEEE EKIEDDDSENVKGCDIVSKEMK PPAAENGKRRRRSSQVKEKLDPVKDENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
        DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR
Subjt:  DGTRSSTDESTRSNGFRHNGSRRKSKPHRAAEAGVNCR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G42190.1 unknown protein1.5e-2348.59Show/hide
Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMK---SPPAAENGKRRRRSSQVKEKLDPVKD
        M RGRGKG+K   +  +D GSG+EEKIPA +RRGRPQKP+KD+ +EEE    E+DD E V+  ++  ++ +       +++ K R+R        D  ++
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMK---SPPAAENGKRRRRSSQVKEKLDPVKD

Query:  ENGDGTRSSTDESTRSN--GFRHNGSRRKSKPHRAAEAGVNC
        ENG G++ +TD+STRS   GFR NGSRRKSKP RAAEA V C
Subjt:  ENGDGTRSSTDESTRSN--GFRHNGSRRKSKPHRAAEAGVNC

AT3G57930.1 unknown protein9.0e-2450Show/hide
Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        M RGRGKG++   T  +D GSGEEEKIPA ++RGRPQKP+KDE +EEE E ++  D E  K  D            ENG++R++  + KE  +  ++ENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSN---GFRHNGSRRKSKPHRAAEAGVNC
         G++SST++S +S+   GFR NGSRRK+KP RAAEA V C
Subjt:  DGTRSSTDESTRSN---GFRHNGSRRKSKPHRAAEAGVNC

AT3G57930.2 unknown protein9.0e-2450Show/hide
Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG
        M RGRGKG++   T  +D GSGEEEKIPA ++RGRPQKP+KDE +EEE E ++  D E  K  D            ENG++R++  + KE  +  ++ENG
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENG

Query:  DGTRSSTDESTRSN---GFRHNGSRRKSKPHRAAEAGVNC
         G++SST++S +S+   GFR NGSRRK+KP RAAEA V C
Subjt:  DGTRSSTDESTRSN---GFRHNGSRRKSKPHRAAEAGVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGAGGTCGGGGAAAGGGGAGGAAGTTGACCGTGACGAATCACGATGATGCTGGAAGCGGTGAGGAAGAGAAGATCCCTGCACAAAAGCGAAGGGGAAGGCCACA
GAAGCCATTGAAGGACGAGATCGACGAGGAGGAAACCGAAAAGATAGAAGACGACGACAGCGAGAACGTGAAAGGCTGCGACATTGTGAGCAAGGAGATGAAAAGCCCAC
CTGCAGCAGAGAATGGGAAAAGAAGGAGAAGAAGCTCACAAGTGAAAGAAAAGCTCGATCCGGTGAAAGACGAAAACGGGGACGGAACACGGTCGAGCACCGATGAATCA
ACAAGATCAAACGGATTTCGTCACAACGGAAGCAGGCGAAAAAGCAAGCCCCATCGAGCTGCTGAAGCGGGCGTGAACTGCAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGAGGTCGGGGAAAGGGGAGGAAGTTGACCGTGACGAATCACGATGATGCTGGAAGCGGTGAGGAAGAGAAGATCCCTGCACAAAAGCGAAGGGGAAGGCCACA
GAAGCCATTGAAGGACGAGATCGACGAGGAGGAAACCGAAAAGATAGAAGACGACGACAGCGAGAACGTGAAAGGCTGCGACATTGTGAGCAAGGAGATGAAAAGCCCAC
CTGCAGCAGAGAATGGGAAAAGAAGGAGAAGAAGCTCACAAGTGAAAGAAAAGCTCGATCCGGTGAAAGACGAAAACGGGGACGGAACACGGTCGAGCACCGATGAATCA
ACAAGATCAAACGGATTTCGTCACAACGGAAGCAGGCGAAAAAGCAAGCCCCATCGAGCTGCTGAAGCGGGCGTGAACTGCAGGTAA
Protein sequenceShow/hide protein sequence
MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEETEKIEDDDSENVKGCDIVSKEMKSPPAAENGKRRRRSSQVKEKLDPVKDENGDGTRSSTDES
TRSNGFRHNGSRRKSKPHRAAEAGVNCR