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Carg16972 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16972
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr10:5232951..5234608
RNA-Seq ExpressionCarg16972
SyntenyCarg16972
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023885.1 hypothetical protein SDJN02_14912, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-123100Show/hide
Query:  MENRMILEDMRSCTTEHAAKLNLHNHPCSSNRFLARSTVAFLVGSGRTPMNCKSKSPNREKQFKTDSIYSKSLVLSAKELKIHIQSMVKYNTLSDIRRSM
        MENRMILEDMRSCTTEHAAKLNLHNHPCSSNRFLARSTVAFLVGSGRTPMNCKSKSPNREKQFKTDSIYSKSLVLSAKELKIHIQSMVKYNTLSDIRRSM
Subjt:  MENRMILEDMRSCTTEHAAKLNLHNHPCSSNRFLARSTVAFLVGSGRTPMNCKSKSPNREKQFKTDSIYSKSLVLSAKELKIHIQSMVKYNTLSDIRRSM

Query:  AGIRETQSEGAIDFEAKIRVILILDKNTEALLTLLHHLLEPTAAINGRRFGIAANIRQARGKADELRLQKELAGEAADCRRQREPLEMVKNREREMVGME
        AGIRETQSEGAIDFEAKIRVILILDKNTEALLTLLHHLLEPTAAINGRRFGIAANIRQARGKADELRLQKELAGEAADCRRQREPLEMVKNREREMVGME
Subjt:  AGIRETQSEGAIDFEAKIRVILILDKNTEALLTLLHHLLEPTAAINGRRFGIAANIRQARGKADELRLQKELAGEAADCRRQREPLEMVKNREREMVGME

Query:  LLGVLGKEENGSKGVKREREEERPNDSLRLSRSYFVM
        LLGVLGKEENGSKGVKREREEERPNDSLRLSRSYFVM
Subjt:  LLGVLGKEENGSKGVKREREEERPNDSLRLSRSYFVM
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATCGAATGATCTTGGAGGACATGCGGAGTTGCACGACTGAACATGCTGCCAAACTGAATCTCCATAATCATCCCTGCTCCTCCAATCGGTTTCTTGCTCGTTC
CACCGTCGCTTTTCTCGTTGGCAGTGGACGCACTCCCATGAACTGTAAATCAAAATCACCGAACAGAGAGAAACAGTTCAAAACCGATTCAATCTACTCTAAGAGTTTGG
TGCTAAGTGCAAAAGAGCTGAAAATCCATATACAAAGCATGGTTAAATACAATACACTCAGTGATATTAGAAGGAGCATGGCAGGCATTAGGGAGACCCAAAGCGAGGGA
GCCATTGATTTTGAGGCCAAGATTAGGGTCATCCTTATCCTTGATAAGAACACAGAGGCACTTCTTACTCTTCTGCACCACCTGCTTGAGCCCACTGCAGCAATCAATGG
TAGGCGTTTTGGCATCGCCGCTAACATAAGGCAGGCAAGGGGCAAGGCCGATGAGTTGAGGCTGCAAAAGGAGCTAGCAGGAGAAGCAGCAGATTGCAGAAGACAAAGAG
AGCCATTGGAGATGGTGAAGAACAGAGAGAGGGAGATGGTGGGAATGGAGCTGTTGGGTGTTTTGGGGAAGGAGGAGAACGGAAGCAAAGGTGTTAAAAGGGAGAGGGAA
GAGGAGAGGCCAAATGATTCTCTGCGTTTATCAAGGAGCTATTTTGTCATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATCGAATGATCTTGGAGGACATGCGGAGTTGCACGACTGAACATGCTGCCAAACTGAATCTCCATAATCATCCCTGCTCCTCCAATCGGTTTCTTGCTCGTTC
CACCGTCGCTTTTCTCGTTGGCAGTGGACGCACTCCCATGAACTGTAAATCAAAATCACCGAACAGAGAGAAACAGTTCAAAACCGATTCAATCTACTCTAAGAGTTTGG
TGCTAAGTGCAAAAGAGCTGAAAATCCATATACAAAGCATGGTTAAATACAATACACTCAGTGATATTAGAAGGAGCATGGCAGGCATTAGGGAGACCCAAAGCGAGGGA
GCCATTGATTTTGAGGCCAAGATTAGGGTCATCCTTATCCTTGATAAGAACACAGAGGCACTTCTTACTCTTCTGCACCACCTGCTTGAGCCCACTGCAGCAATCAATGG
TAGGCGTTTTGGCATCGCCGCTAACATAAGGCAGGCAAGGGGCAAGGCCGATGAGTTGAGGCTGCAAAAGGAGCTAGCAGGAGAAGCAGCAGATTGCAGAAGACAAAGAG
AGCCATTGGAGATGGTGAAGAACAGAGAGAGGGAGATGGTGGGAATGGAGCTGTTGGGTGTTTTGGGGAAGGAGGAGAACGGAAGCAAAGGTGTTAAAAGGGAGAGGGAA
GAGGAGAGGCCAAATGATTCTCTGCGTTTATCAAGGAGCTATTTTGTCATGTGA
Protein sequenceShow/hide protein sequence
MENRMILEDMRSCTTEHAAKLNLHNHPCSSNRFLARSTVAFLVGSGRTPMNCKSKSPNREKQFKTDSIYSKSLVLSAKELKIHIQSMVKYNTLSDIRRSMAGIRETQSEG
AIDFEAKIRVILILDKNTEALLTLLHHLLEPTAAINGRRFGIAANIRQARGKADELRLQKELAGEAADCRRQREPLEMVKNREREMVGMELLGVLGKEENGSKGVKRERE
EERPNDSLRLSRSYFVM