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Carg16976 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16976
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr10:5259353..5260735
RNA-Seq ExpressionCarg16976
SyntenyCarg16976
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017831.1 hypothetical protein SDJN02_19697 [Cucurbita argyrosperma subsp. argyrosperma]4.0e-0466.67Show/hide
Query:  LLGPEGG----RGIWWQSHIDWRKERVPARTLGPEG
        +L PEGG    +G+ W SHIDWR+ERVPARTLGP G
Subjt:  LLGPEGG----RGIWWQSHIDWRKERVPARTLGPEG
KAG7023889.1 hypothetical protein SDJN02_14916, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-68100Show/hide
Query:  MWDITMPKKAITNGIRARHRTMYQLSRCFLLGPEGGRGIWWQSHIDWRKERVPARTLGPEGRWIPSTGFLPKPYFTFSHALPLITSNCHSAPPSLPDVVS
        MWDITMPKKAITNGIRARHRTMYQLSRCFLLGPEGGRGIWWQSHIDWRKERVPARTLGPEGRWIPSTGFLPKPYFTFSHALPLITSNCHSAPPSLPDVVS
Subjt:  MWDITMPKKAITNGIRARHRTMYQLSRCFLLGPEGGRGIWWQSHIDWRKERVPARTLGPEGRWIPSTGFLPKPYFTFSHALPLITSNCHSAPPSLPDVVS

Query:  AAAIVSAFRRNLRRSSLSQSHARAIN
        AAAIVSAFRRNLRRSSLSQSHARAIN
Subjt:  AAAIVSAFRRNLRRSSLSQSHARAIN
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGACATCACAATGCCCAAAAAGGCCATTACAAATGGTATCAGAGCTAGACACCGGACGATGTACCAGCTTTCTCGCTGTTTCTTGCTGGGCCCCGAAGGGGGGAG
GGGGATTTGGTGGCAGTCCCACATCGATTGGAGGAAGGAAAGAGTGCCAGCGAGGACATTGGGCCCCGAAGGGCGGTGGATTCCATCCACTGGCTTTCTTCCTAAACCCT
ACTTCACCTTCAGCCACGCCCTCCCTCTCATTACCAGCAACTGTCACAGTGCTCCGCCGTCCCTGCCGGACGTCGTGTCAGCGGCTGCCATAGTCTCAGCCTTCCGACGA
AATTTACGCCGGTCGTCCCTCTCACAGTCTCACGCTCGAGCAATCAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGGACATCACAATGCCCAAAAAGGCCATTACAAATGGTATCAGAGCTAGACACCGGACGATGTACCAGCTTTCTCGCTGTTTCTTGCTGGGCCCCGAAGGGGGGAG
GGGGATTTGGTGGCAGTCCCACATCGATTGGAGGAAGGAAAGAGTGCCAGCGAGGACATTGGGCCCCGAAGGGCGGTGGATTCCATCCACTGGCTTTCTTCCTAAACCCT
ACTTCACCTTCAGCCACGCCCTCCCTCTCATTACCAGCAACTGTCACAGTGCTCCGCCGTCCCTGCCGGACGTCGTGTCAGCGGCTGCCATAGTCTCAGCCTTCCGACGA
AATTTACGCCGGTCGTCCCTCTCACAGTCTCACGCTCGAGCAATCAATTAG
Protein sequenceShow/hide protein sequence
MWDITMPKKAITNGIRARHRTMYQLSRCFLLGPEGGRGIWWQSHIDWRKERVPARTLGPEGRWIPSTGFLPKPYFTFSHALPLITSNCHSAPPSLPDVVSAAAIVSAFRR
NLRRSSLSQSHARAIN