; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg16994 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg16994
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionserine/arginine-rich splicing factor 11 isoform X1
Genome locationCarg_Chr11:6935038..6938183
RNA-Seq ExpressionCarg16994
SyntenyCarg16994
Gene Ontology termsGO:0016853 - isomerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588567.1 hypothetical protein SDJN03_17132, partial [Cucurbita argyrosperma subsp. sororia]3.7e-7298.9Show/hide
Query:  MAASSSSASPYTSDSSSSSS--RRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKK
        MAASSSSASPYTSDSSSSSS  RRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKK
Subjt:  MAASSSSASPYTSDSSSSSS--RRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKK

Query:  ERERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_022931719.1 serine/arginine-rich splicing factor 11 isoform X1 [Cucurbita moschata]4.4e-7399.44Show/hide
Query:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER
        MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDR+ALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER
Subjt:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER

Query:  ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_022970036.1 probable splicing factor, arginine/serine-rich 7 isoform X1 [Cucurbita maxima]3.4e-7399.44Show/hide
Query:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER
        MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER
Subjt:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER

Query:  ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERSKS+HHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_023531665.1 probable splicing factor, arginine/serine-rich 7 isoform X1 [Cucurbita pepo subsp. pepo]1.2e-73100Show/hide
Query:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER
        MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER
Subjt:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER

Query:  ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_023531666.1 probable splicing factor, arginine/serine-rich 7 isoform X2 [Cucurbita pepo subsp. pepo]6.4e-7299.44Show/hide
Query:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER
        MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKK R
Subjt:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER

Query:  ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

TrEMBL top hitse value%identityAlignment
A0A6J1C3K8 serine/arginine-rich splicing factor 111.5e-6391.8Show/hide
Query:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTK--K
        MAASSSSA+ +TSDSSSSSSRRRRRRR+RR+KDRDALRIRKKSRSHSKRRRRHRRSSS+SLSSSDSES+YSRS SSSQSEPE SGRSKRHKKND TK  K
Subjt:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTK--K

Query:  ERERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLARE-DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSKS HHKRRKHKAKEKQPEERSSSPVQLSKFLARE DDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLARE-DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1EV15 serine/arginine-rich splicing factor 11 isoform X12.1e-7399.44Show/hide
Query:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER
        MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDR+ALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER
Subjt:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER

Query:  ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1F093 NKAP family protein isoform X21.2e-7198.89Show/hide
Query:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER
        MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDR+ALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKK R
Subjt:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER

Query:  ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1HZG5 probable splicing factor, arginine/serine-rich 7 isoform X11.6e-7399.44Show/hide
Query:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER
        MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER
Subjt:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER

Query:  ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERSKS+HHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1I4D4 NKAP family protein isoform X28.9e-7298.89Show/hide
Query:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER
        MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKK R
Subjt:  MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKER

Query:  ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERSKS+HHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G27860.1 unknown protein4.9e-3058.92Show/hide
Query:  MAASSSSASPYTSDSSSSSSRRR--RRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTK-
        MAASSSS+S   S  SS S RRR  RR   R ++DRD+L++RKKSRS SK+RRR + SS +        SD S S SSS+S      +S+RHKK++  K 
Subjt:  MAASSSSASPYTSDSSSSSSRRR--RRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTK-

Query:  -KERERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLARE-DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
         K++ERSKS  HKR K++ ++K   E SS PV+LSKFL R+ DDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+SFD
Subjt:  -KERERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLARE-DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

AT5G27860.2 unknown protein4.9e-3058.92Show/hide
Query:  MAASSSSASPYTSDSSSSSSRRR--RRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTK-
        MAASSSS+S   S  SS S RRR  RR   R ++DRD+L++RKKSRS SK+RRR + SS +        SD S S SSS+S      +S+RHKK++  K 
Subjt:  MAASSSSASPYTSDSSSSSSRRR--RRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTK-

Query:  -KERERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLARE-DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
         K++ERSKS  HKR K++ ++K   E SS PV+LSKFL R+ DDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+SFD
Subjt:  -KERERSKSRHHKRRKHKAKEKQPEERSSSPVQLSKFLARE-DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCCTCGTCTTCATCGGCATCACCCTACACTTCCGATTCATCGTCTTCCTCTTCTCGTCGTCGCCGTCGCCGTAGAACTCGCCGTGAAAAAGATCGGGACGCTCT
TAGGATTCGCAAGAAGTCTCGCTCTCATTCTAAGCGTCGTCGCAGGCACCGCCGCTCCTCCTCCAATTCTTTATCTTCCTCCGACTCCGAATCCGATTACTCCCGAAGCC
ATAGCTCTTCTCAAAGCGAGCCTGAAATGTCAGGCCGTTCAAAGCGGCATAAGAAGAATGATGGAACGAAGAAGGAGAGGGAGCGAAGTAAGAGTCGTCACCATAAAAGG
CGTAAGCATAAAGCTAAAGAGAAACAGCCAGAAGAGAGAAGTAGCAGCCCTGTGCAGCTGTCTAAGTTTTTAGCGCGGGAGGATGATGGTACTCGACGGAGTGCTGTCTC
TGGCAAAAAGATATTGTTGAAACTTGATAAATCAAAGGAAGACAAAGCTGAGGAAAACAAACGAAATGAATTGCTGAAGTTCTTGAACTCTAGCTTTGACTAA
mRNA sequenceShow/hide mRNA sequence
CCCTCCTCTCTCTCTCTCTCTCTCTCCCTCTCGCTCTGATCGATGGCGGCCTCGTCTTCATCGGCATCACCCTACACTTCCGATTCATCGTCTTCCTCTTCTCGTCGTCG
CCGTCGCCGTAGAACTCGCCGTGAAAAAGATCGGGACGCTCTTAGGATTCGCAAGAAGTCTCGCTCTCATTCTAAGCGTCGTCGCAGGCACCGCCGCTCCTCCTCCAATT
CTTTATCTTCCTCCGACTCCGAATCCGATTACTCCCGAAGCCATAGCTCTTCTCAAAGCGAGCCTGAAATGTCAGGCCGTTCAAAGCGGCATAAGAAGAATGATGGAACG
AAGAAGGAGAGGGAGCGAAGTAAGAGTCGTCACCATAAAAGGCGTAAGCATAAAGCTAAAGAGAAACAGCCAGAAGAGAGAAGTAGCAGCCCTGTGCAGCTGTCTAAGTT
TTTAGCGCGGGAGGATGATGGTACTCGACGGAGTGCTGTCTCTGGCAAAAAGATATTGTTGAAACTTGATAAATCAAAGGAAGACAAAGCTGAGGAAAACAAACGAAATG
AATTGCTGAAGTTCTTGAACTCTAGCTTTGACTAATGGGTTGGGTATCCTTGAAATGAAGTTAAGAGGCAAATGATAGAAGAATGGAATATTAGCTGCTGCTGCATGAAA
AAATCAGTACAACCAATAGCTGTGTTGAATAAGTTGTAGAGACATTCAAGCTTGTGAGCTTTCTTCTTCCCTTGATTGATGTTTTGACGCATATGGATTGAGATCTATTT
TAATTATGAAAAGGAATTGATTTTATTTGATTGGTTGGGATGGAATGAATGATTGATTGGTTATTAGTTAAGATTAGATTATGGTAACATTAATCTTTGTATTTGCATAA
ATTATTGTGTTTTTTAGGATATACATGAGAGTGACTCACCCTTATCGAAAACTTATGGGGAGTTTTT
Protein sequenceShow/hide protein sequence
MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNSLSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKKERERSKSRHHKR
RKHKAKEKQPEERSSSPVQLSKFLAREDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD