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Carg17004 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17004
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMajor latex allergen Hev b 5-like
Genome locationCarg_Chr11:7136789..7137345
RNA-Seq ExpressionCarg17004
SyntenyCarg17004
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588522.1 hypothetical protein SDJN03_17087, partial [Cucurbita argyrosperma subsp. sororia]2.4e-6275.12Show/hide
Query:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSA--------------
        MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKP SLDSA              
Subjt:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSA--------------

Query:  ----------------------------------KPTSLDSDKPRSLDSDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAV--AGAKEVK
                                          KP SLDSDKPRSLDSDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAA   AGAKEVK
Subjt:  ----------------------------------KPTSLDSDKPRSLDSDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAV--AGAKEVK

Query:  SEAKAAKKDEKSA
        SEAKAAKKDEKSA
Subjt:  SEAKAAKKDEKSA

KAG7022371.1 hypothetical protein SDJN02_16102, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-72100Show/hide
Query:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSAKPTSLDSDKPRSLD
        MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSAKPTSLDSDKPRSLD
Subjt:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSAKPTSLDSDKPRSLD

Query:  SDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAVAGAKEVKSEAKAAKKDEKSA
        SDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAVAGAKEVKSEAKAAKKDEKSA
Subjt:  SDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAVAGAKEVKSEAKAAKKDEKSA

XP_022931727.1 patellin-1-like [Cucurbita moschata]7.1e-3868.29Show/hide
Query:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSAKPTSLDSDKPRSLD
        MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPP                                   
Subjt:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSAKPTSLDSDKPRSLD

Query:  SDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAVAGAKEV-KSEAKAAKKDEKSA
                     SLDSLLVEKEAEVPS+TKAEEQPPKEAAAVAGAKEV KSE KAAK+DEKSA
Subjt:  SDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAVAGAKEV-KSEAKAAKKDEKSA

XP_022970143.1 uncharacterized protein LOC111469128 [Cucurbita maxima]2.4e-4173.08Show/hide
Query:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSAKPTSLDSDKPRSLD
        MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVD VIDE  KDDTE VVVEEAKPPSLDSAKPPSLDSA P SLDSAKP            
Subjt:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSAKPTSLDSDKPRSLD

Query:  SDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAVAGAKEVKSEAKAA
                     SLDSLLVEK+AEVPS+TKAEEQPPK  A VAGA+EVK   ++A
Subjt:  SDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAVAGAKEVKSEAKAA

XP_023531836.1 coiled-coil domain-containing protein 8-like [Cucurbita pepo subsp. pepo]1.5e-5160.32Show/hide
Query:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPT-------------------
        MGACATKPKAKVDTAVIPAPE VDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKP SLDSAKPT                   
Subjt:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPT-------------------

Query:  ---------------------------------------------------------------------SLDSAKPTSLDSDKPRSLDSDKPRSLDSDKP
                                                                             SLDSAKP SLDS KPRSLDS KPRSLDSDKP
Subjt:  ---------------------------------------------------------------------SLDSAKPTSLDSDKPRSLDSDKPRSLDSDKP

Query:  RSLDSLLVEKEAEVPSLTKAEEQPPKEAAAVAGAKEV-KSEAKAAKKDEKSA
        RSLDSLLVEKEAEV S+TKAEEQPPK AAAV GA+EV KSE KAAKKDEKSA
Subjt:  RSLDSLLVEKEAEVPSLTKAEEQPPKEAAAVAGAKEV-KSEAKAAKKDEKSA

TrEMBL top hitse value%identityAlignment
A0A0A0K3E6 Uncharacterized protein6.1e-1145.29Show/hide
Query:  MGACATKPKAKV-DTAVIPAPEPVD-DMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSAKPTSLDSDKPRS
        MGACATKPK K  D A IPAPEP+D D+VKN EEVK VE+EK+ D   DEKKK++ EKVVV+E KPP                                 
Subjt:  MGACATKPKAKV-DTAVIPAPEPVD-DMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSAKPTSLDSDKPRS

Query:  LDSDKPRSLDSDKPRSLDSLLVEKEA----EVPSLTKAEEQP-PKEAAAVAGAKEV-KSEAKAAKKDEKS
                       SL SLLVEKEA    EV  + KAEE+P  KE AA     E+ KSE K  +KDEKS
Subjt:  LDSDKPRSLDSDKPRSLDSLLVEKEA----EVPSLTKAEEQP-PKEAAAVAGAKEV-KSEAKAAKKDEKS

A0A1S3BGT9 major latex allergen Hev b 5-like2.0e-0941.52Show/hide
Query:  MGACATKPKAKV-DTAVIPAPEPVD-DMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSAKPTSLDSDKPRS
        MGACATKPK K  D A IPAPEP+D D+VKN EE+KVVE+EK+VD   DEKKK+D EKV+VE+ K P                                 
Subjt:  MGACATKPKAKV-DTAVIPAPEPVD-DMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSAKPTSLDSDKPRS

Query:  LDSDKPRSLDSDKPRSLDSLLVEKE-----AEVPSLTKAEEQPPKE--AAAVAGAKEVKSEAKAAKKDEKS
                       SL SLLVEKE      EV  + KA+E+P  E   A    A+  +SE K  +K+EKS
Subjt:  LDSDKPRSLDSDKPRSLDSLLVEKE-----AEVPSLTKAEEQPPKE--AAAVAGAKEVKSEAKAAKKDEKS

A0A5A7TGB5 Major latex allergen Hev b 5-like7.2e-1269.01Show/hide
Query:  MGACATKPKAKV-DTAVIPAPEPVD-DMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDS
        MGACATKPK K  D A IPAPEP+D D+VKN EE+KVVE+EK+VD   DEKKK+D EKV+VE+ K PSL S
Subjt:  MGACATKPKAKV-DTAVIPAPEPVD-DMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDS

A0A6J1EUI1 patellin-1-like3.4e-3868.29Show/hide
Query:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSAKPTSLDSDKPRSLD
        MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPP                                   
Subjt:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSAKPTSLDSDKPRSLD

Query:  SDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAVAGAKEV-KSEAKAAKKDEKSA
                     SLDSLLVEKEAEVPS+TKAEEQPPKEAAAVAGAKEV KSE KAAK+DEKSA
Subjt:  SDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAVAGAKEV-KSEAKAAKKDEKSA

A0A6J1I303 uncharacterized protein LOC1114691281.1e-4173.08Show/hide
Query:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSAKPTSLDSDKPRSLD
        MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVD VIDE  KDDTE VVVEEAKPPSLDSAKPPSLDSA P SLDSAKP            
Subjt:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSAKPTSLDSDKPRSLD

Query:  SDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAVAGAKEVKSEAKAA
                     SLDSLLVEK+AEVPS+TKAEEQPPK  A VAGA+EVK   ++A
Subjt:  SDKPRSLDSDKPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAVAGAKEVKSEAKAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCCTGTGCCACCAAGCCTAAGGCCAAGGTAGATACGGCCGTCATCCCTGCACCCGAGCCTGTCGACGACATGGTGAAGAACACCGAGGAAGTTAAGGTCGTGGA
AGACGAGAAGAGGGTCGATGATGTAATTGATGAAAAGAAGAAGGACGACACCGAGAAAGTTGTCGTTGAGGAAGCCAAGCCTCCGTCTCTCGACTCCGCCAAGCCTCCGT
CTCTCGACTCCGCCAAGCCTACGTCTCTCGACTCCGCCAAGCCTACGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGAC
AAGCCTCGGTCTCTCGACTCCTTGCTCGTTGAGAAGGAAGCTGAAGTTCCGAGCTTGACGAAGGCGGAGGAGCAGCCACCGAAGGAGGCGGCGGCAGTGGCAGGGGCGAA
AGAAGTGAAGAGTGAAGCGAAAGCAGCGAAGAAGGATGAGAAGAGCGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGCCTGTGCCACCAAGCCTAAGGCCAAGGTAGATACGGCCGTCATCCCTGCACCCGAGCCTGTCGACGACATGGTGAAGAACACCGAGGAAGTTAAGGTCGTGGA
AGACGAGAAGAGGGTCGATGATGTAATTGATGAAAAGAAGAAGGACGACACCGAGAAAGTTGTCGTTGAGGAAGCCAAGCCTCCGTCTCTCGACTCCGCCAAGCCTCCGT
CTCTCGACTCCGCCAAGCCTACGTCTCTCGACTCCGCCAAGCCTACGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGACAAGCCTCGGTCTCTCGACTCCGAC
AAGCCTCGGTCTCTCGACTCCTTGCTCGTTGAGAAGGAAGCTGAAGTTCCGAGCTTGACGAAGGCGGAGGAGCAGCCACCGAAGGAGGCGGCGGCAGTGGCAGGGGCGAA
AGAAGTGAAGAGTGAAGCGAAAGCAGCGAAGAAGGATGAGAAGAGCGCATGA
Protein sequenceShow/hide protein sequence
MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSAKPPSLDSAKPTSLDSAKPTSLDSDKPRSLDSDKPRSLDSD
KPRSLDSLLVEKEAEVPSLTKAEEQPPKEAAAVAGAKEVKSEAKAAKKDEKSA