CuGenDBv2

Gene ID	Carg17027
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Genome location	Carg_Chr09:4213699..4215552
RNA-Seq Expression	Carg17027
Synteny	Carg17027
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_011653802.1 uncharacterized protein At4g08330, chloroplastic [Cucumis sativus]

2.0e-75

85.71

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Query:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF
        MRQSPVF DD+  GTHV++FSS SL PSSSRRDVYYSCGACGYELNLSS NRN STIGSKYGKSIKRGIISFLNIDESRFTQVD+LQCVPHFSK+SWGLF
Subjt:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF

Query:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSD-SSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI
        +RRIKLLCRKCGN+IGNA+++HT+SSPLVSDGSD SSLPNEVSRCMKYEVKIRALQPSSS+E  P +I
Subjt:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSD-SSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI

XP_022135315.1 uncharacterized protein At4g08330, chloroplastic [Momordica charantia]

1.8e-76

85.03

Show/hide

Query:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF
        M+QSPV  DD+++GTH  +FS+ SL  SSSRRDVYYSCGACGYELNLSSSNRN STIGSKYGKSIKRGIISFLN+DESRFTQVD+LQCVPHFSKHSWGLF
Subjt:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF

Query:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI
        +RR KLLCRKCGNHIGNA+TS  SS PLVSDGSDSSLP+EVSRCMKYEVKIRALQPSSSH+ GPPVI
Subjt:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI

XP_022937411.1 uncharacterized protein At4g08330, chloroplastic-like [Cucurbita moschata]

2.5e-91

100

Show/hide

Query:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF
        MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF
Subjt:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF

Query:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI
        QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI
Subjt:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI

XP_022976871.1 uncharacterized protein At4g08330, chloroplastic-like [Cucurbita maxima]

1.0e-87

97.6

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Query:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF
        MRQSPVF DDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF
Subjt:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF

Query:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI
        QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHET   VI
Subjt:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI

XP_023534843.1 uncharacterized protein At4g08330, chloroplastic-like [Cucurbita pepo subsp. pepo]

1.8e-89

98.8

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Query:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF
        MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF
Subjt:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF

Query:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI
        QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHET  PVI
Subjt:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L375 Uncharacterized protein

9.5e-76

85.71

Show/hide

Query:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF
        MRQSPVF DD+  GTHV++FSS SL PSSSRRDVYYSCGACGYELNLSS NRN STIGSKYGKSIKRGIISFLNIDESRFTQVD+LQCVPHFSK+SWGLF
Subjt:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF

Query:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSD-SSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI
        +RRIKLLCRKCGN+IGNA+++HT+SSPLVSDGSD SSLPNEVSRCMKYEVKIRALQPSSS+E  P +I
Subjt:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSD-SSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI

A0A5D3D741 Uncharacterized protein

1.2e-75

85.12

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Query:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF
        MRQSPVF DD+  GTH+++FSS SL PSSSRRDVYYSCGACGYELNLSS NRN STIGSKYGKSIKRGIISFLNIDESRFTQVD+LQCVPHFSK+SWGLF
Subjt:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF

Query:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSD-SSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI
        +RRIKLLCRKCGN+IGNA+++HT+SSPLVSDGSD SSLPNEVSRCMKYEVKIRALQPSSS+E  P +I
Subjt:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSD-SSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI

A0A6J1C0S6 uncharacterized protein At4g08330, chloroplastic

8.6e-77

85.03

Show/hide

Query:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF
        M+QSPV  DD+++GTH  +FS+ SL  SSSRRDVYYSCGACGYELNLSSSNRN STIGSKYGKSIKRGIISFLN+DESRFTQVD+LQCVPHFSKHSWGLF
Subjt:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF

Query:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI
        +RR KLLCRKCGNHIGNA+TS  SS PLVSDGSDSSLP+EVSRCMKYEVKIRALQPSSSH+ GPPVI
Subjt:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI

A0A6J1FA98 uncharacterized protein At4g08330, chloroplastic-like

1.2e-91

100

Show/hide

Query:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF
        MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF
Subjt:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF

Query:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI
        QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI
Subjt:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI

A0A6J1II32 uncharacterized protein At4g08330, chloroplastic-like

4.8e-88

97.6

Show/hide

Query:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF
        MRQSPVF DDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF
Subjt:  MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLF

Query:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI
        QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHET   VI
Subjt:  QRRIKLLCRKCGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI

SwissProt top hits

e value

%identity

Alignment

Q9STN5 Uncharacterized protein At4g08330, chloroplastic

2.3e-42

61.7

Show/hide

Query:  AFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLFQRRIKLLCRKCGNHIGNA
        +FSS S   SSS R V YSCG+CGYELNLSS+NR  STIGSKYGKS+K GIISF NIDE RF+QVD+ QC+PHFS++SWGLF+ R KLLCRKC N+IGNA
Subjt:  AFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLFQRRIKLLCRKCGNHIGNA

Query:  YTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSS
                 LV+  SD + P  +    KY+++IR+LQPSS+
Subjt:  YTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSS

Arabidopsis top hits

e value

%identity

Alignment

AT4G08330.1 unknown protein

1.6e-43

61.7

Show/hide

Query:  AFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLFQRRIKLLCRKCGNHIGNA
        +FSS S   SSS R V YSCG+CGYELNLSS+NR  STIGSKYGKS+K GIISF NIDE RF+QVD+ QC+PHFS++SWGLF+ R KLLCRKC N+IGNA
Subjt:  AFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLFQRRIKLLCRKCGNHIGNA

Query:  YTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSS
                 LV+  SD + P  +    KY+++IR+LQPSS+
Subjt:  YTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSS

AT4G08330.2 unknown protein.

3.6e-35

53.57

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Query:  FSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLFQRRIKLLCRKCGNHIGNAY
        F SPS   SSS   + +        +N SS+NR  STIGSKYGKS+K GIISF NIDE RF+QVD+ QC+PHFS++SWGLF+ R KLLCRKC N+IGNA 
Subjt:  FSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLFQRRIKLLCRKCGNHIGNAY

Query:  TSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSS
                LV+  SD + P  +    KY+++IR+LQPSS+
Subjt:  TSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGACAGTCGCCGGTCTTCGAAGACGATCACGTCGAAGGAACTCACGTTCGGGCCTTTTCGTCGCCTTCGCTCTGCCCTTCTTCTTCTCGCAGAGATGTTTATTACAG
CTGTGGTGCTTGTGGATATGAACTGAACTTGAGCTCTTCTAACCGCAATATATCGACCATTGGCTCTAAATATGGGAAATCAATAAAGCGAGGGATCATATCGTTTCTAA
ACATCGACGAGAGCAGATTTACACAGGTTGATCAACTTCAATGTGTGCCTCATTTCTCGAAGCACTCTTGGGGTCTGTTTCAACGTAGAATCAAACTACTGTGTCGAAAA
TGTGGAAACCATATTGGAAATGCTTACACTAGCCATACTTCCTCCTCCCCACTTGTTTCAGATGGATCAGATTCATCTTTGCCTAATGAAGTCTCTAGGTGCATGAAATA
TGAAGTGAAAATTCGTGCGTTACAACCCTCGTCCTCCCACGAAACCGGCCCCCCAGTTATTTAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MRQSPVFEDDHVEGTHVRAFSSPSLCPSSSRRDVYYSCGACGYELNLSSSNRNISTIGSKYGKSIKRGIISFLNIDESRFTQVDQLQCVPHFSKHSWGLFQRRIKLLCRK
CGNHIGNAYTSHTSSSPLVSDGSDSSLPNEVSRCMKYEVKIRALQPSSSHETGPPVI

Carg17027 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome