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Carg17030 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17030
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationCarg_Chr09:4223663..4226592
RNA-Seq ExpressionCarg17030
SyntenyCarg17030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591893.1 Acetyltransferase, partial [Cucurbita argyrosperma subsp. sororia]8.7e-54100Show/hide
Query:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG
        MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG
Subjt:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG

Query:  AEQAATGDANSQGSKLM
        AEQAATGDANSQGSKLM
Subjt:  AEQAATGDANSQGSKLM
XP_022140674.1 uncharacterized protein LOC111011272 [Momordica charantia]6.9e-4380.67Show/hide
Query:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPV-SPS
        MD+ATKFLRT+T+A+NN TLINVCLV+SFGALSARSIKQQREIEALEAEKDSLLNSNK+LKK+MWDWKQQL+++AS++SALVPLARIKAIYGE P+ SP+
Subjt:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPV-SPS

Query:  GAEQAATGDANSQGSKLMV
        GA  AAT D NSQGSK +V
Subjt:  GAEQAATGDANSQGSKLMV
XP_022937146.1 uncharacterized protein LOC111443531 [Cucurbita moschata]3.0e-54100Show/hide
Query:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG
        MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG
Subjt:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG

Query:  AEQAATGDANSQGSKLMV
        AEQAATGDANSQGSKLMV
Subjt:  AEQAATGDANSQGSKLMV
XP_022976887.1 uncharacterized protein LOC111477117 [Cucurbita maxima]1.8e-5194.07Show/hide
Query:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG
        MDLA+KFLRT+T+ATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNK+LKKTMWDWKQQLYS+ASTDSAL+PLARIKAIY EAPVSPSG
Subjt:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG

Query:  AEQAATGDANSQGSKLMV
        AEQAATGDANSQGSKLMV
Subjt:  AEQAATGDANSQGSKLMV
XP_038897052.1 uncharacterized protein LOC120085226 [Benincasa hispida]3.5e-4788.14Show/hide
Query:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG
        MDLA+KFLRTVT+ATNNNTLINVCLV+SFGALSARSIKQQREIEALEAEK SLLNSNK+LKKTMWDWKQQL+++ASTDSALVPLARIKAIYGEAP+SPSG
Subjt:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG

Query:  AEQAATGDANSQGSKLMV
            AT DANSQGSKLMV
Subjt:  AEQAATGDANSQGSKLMV
TrEMBL top hitse value%identityAlignment
A0A0A0L380 Uncharacterized protein5.2e-3679Show/hide
Query:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG
        MD A+KFLR++ +ATN NT+INVCLV+SF AL+ARSIKQ+R+IEALE EK+SLLNSNK+LKKTMWDWKQQL+++AST+SALVPLARIKAIYGEAP+SPSG
Subjt:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG
A0A1S3B9R7 uncharacterized protein LOC1034875831.2e-4077.97Show/hide
Query:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG
        MDLA+KFLR +++  N NTLINVCLV SF ALSARSIKQ+R+IEALEAEK+SLL+SNK+LKKTMWDWKQQL+++AST SALVPLARIKAIYGEAP+SPSG
Subjt:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG

Query:  AEQAATGDANSQGSKLMV
        A  AAT DA S+ SKLMV
Subjt:  AEQAATGDANSQGSKLMV
A0A6J1CGB8 uncharacterized protein LOC1110112723.4e-4380.67Show/hide
Query:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPV-SPS
        MD+ATKFLRT+T+A+NN TLINVCLV+SFGALSARSIKQQREIEALEAEKDSLLNSNK+LKK+MWDWKQQL+++AS++SALVPLARIKAIYGE P+ SP+
Subjt:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPV-SPS

Query:  GAEQAATGDANSQGSKLMV
        GA  AAT D NSQGSK +V
Subjt:  GAEQAATGDANSQGSKLMV
A0A6J1F9J6 uncharacterized protein LOC1114435311.5e-54100Show/hide
Query:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG
        MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG
Subjt:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG

Query:  AEQAATGDANSQGSKLMV
        AEQAATGDANSQGSKLMV
Subjt:  AEQAATGDANSQGSKLMV
A0A6J1IGY3 uncharacterized protein LOC1114771178.8e-5294.07Show/hide
Query:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG
        MDLA+KFLRT+T+ATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNK+LKKTMWDWKQQLYS+ASTDSAL+PLARIKAIY EAPVSPSG
Subjt:  MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSG

Query:  AEQAATGDANSQGSKLMV
        AEQAATGDANSQGSKLMV
Subjt:  AEQAATGDANSQGSKLMV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48200.1 unknown protein7.9e-2143.22Show/hide
Query:  LATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDAST--DSALVPLARIKAIYGEAPVSPSG
        +A K    ++ A NNN +IN CL +SF  L  RS KQQ+ +EAL  +K+SL  SNK++K TMW+WKQQL+++A++  ++A+VPL+ +KAIYGE   + + 
Subjt:  LATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDAST--DSALVPLARIKAIYGEAPVSPSG

Query:  AEQAATGDANSQGSKLMV
        +   A  D+     K+M+
Subjt:  AEQAATGDANSQGSKLMV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTGGCCACCAAATTTCTTCGCACTGTAACCAGCGCCACCAACAACAACACCCTAATCAACGTCTGTTTGGTCATTTCCTTTGGCGCATTGAGCGCAAGATCAAT
CAAGCAGCAGCGGGAAATCGAAGCTCTGGAGGCTGAGAAAGATTCGCTTCTCAATTCCAATAAATCGCTGAAGAAAACCATGTGGGATTGGAAGCAACAGCTATACTCTG
ATGCCTCAACAGATTCCGCTTTGGTACCTCTCGCCAGGATCAAAGCTATCTATGGCGAAGCTCCGGTATCCCCGTCCGGAGCAGAACAAGCTGCAACCGGAGATGCAAAT
TCACAAGGCTCCAAACTCATGGTTTAA
mRNA sequenceShow/hide mRNA sequence
AAAGCCCACGAAGATCTTTCTTCCCCCAAAAGAGGAAGACAACGGCGACGCGGCTGAAAAACCTCAGGGTTCCCCGATCTTCACTGCAGAATGGACTTGGCCACCAAATT
TCTTCGCACTGTAACCAGCGCCACCAACAACAACACCCTAATCAACGTCTGTTTGGTCATTTCCTTTGGCGCATTGAGCGCAAGATCAATCAAGCAGCAGCGGGAAATCG
AAGCTCTGGAGGCTGAGAAAGATTCGCTTCTCAATTCCAATAAATCGCTGAAGAAAACCATGTGGGATTGGAAGCAACAGCTATACTCTGATGCCTCAACAGATTCCGCT
TTGGTACCTCTCGCCAGGATCAAAGCTATCTATGGCGAAGCTCCGGTATCCCCGTCCGGAGCAGAACAAGCTGCAACCGGAGATGCAAATTCACAAGGCTCCAAACTCAT
GGTTTAATCTTAGTTTATTAGTTAGTTGACTCTAGTTTCTGAAGTTTTGTTCCCAAGTTCATGTTCATTTGCCATTAACCCCTCGAGAATAAAGCAGCTATTTAGTACTG
TGGTCAAAAGCTCTAAGATACAATCTTTTACATCTATTTTATAATATATTATCAAAAAATGAAAAATATAATACAAAAATAGTTTAGAAGTTCTATTTTGCTCTATATAC
GTTACAATTTTTT
Protein sequenceShow/hide protein sequence
MDLATKFLRTVTSATNNNTLINVCLVISFGALSARSIKQQREIEALEAEKDSLLNSNKSLKKTMWDWKQQLYSDASTDSALVPLARIKAIYGEAPVSPSGAEQAATGDAN
SQGSKLMV