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Carg17034 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17034
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr09:4239549..4240255
RNA-Seq ExpressionCarg17034
SyntenyCarg17034
Gene Ontology termsGO:0000077 - DNA damage checkpoint (biological process)
GO:0006281 - DNA repair (biological process)
GO:0033314 - mitotic DNA replication checkpoint (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591896.1 hypothetical protein SDJN03_14242, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3897.89Show/hide
Query:  MRRKLAPLRSLNGCSEVFAVKNRRRMESILRRNNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMRL
        MRRKLAPLRSLNGCSEVFAVKNRRRMESILRRNNYGEDEELCGSRNKKKRKSKRK TPQSRSSKK AKAKRAMNLTPKKIVHSEEATPTIPDMRL
Subjt:  MRRKLAPLRSLNGCSEVFAVKNRRRMESILRRNNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMRL

KAG6593418.1 hypothetical protein SDJN03_12894, partial [Cucurbita argyrosperma subsp. sororia]4.3e-2797.33Show/hide
Query:  MRRKLAPLRSLNGCSEVFAVKNRRRMESILRRNNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNL
        MRRKLAPLRSLNGCSEVFAVKNRRRMESILRRNNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKK AKAKRAMN+
Subjt:  MRRKLAPLRSLNGCSEVFAVKNRRRMESILRRNNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNL

KAG7024770.1 hypothetical protein SDJN02_13588 [Cucurbita argyrosperma subsp. argyrosperma]6.8e-41100Show/hide
Query:  MRRKLAPLRSLNGCSEVFAVKNRRRMESILRRNNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMRL
        MRRKLAPLRSLNGCSEVFAVKNRRRMESILRRNNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMRL
Subjt:  MRRKLAPLRSLNGCSEVFAVKNRRRMESILRRNNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMRL

XP_038898740.1 uncharacterized protein LOC120086264 isoform X1 [Benincasa hispida]3.4e-1682.54Show/hide
Query:  NNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMRL
        NN GE+EELCGS+ KKKRKSK K TPQSRSSKKQAK KRA+NLTPKKI+H EEATPTIPD+RL
Subjt:  NNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMRL

XP_038898741.1 uncharacterized protein LOC120086264 isoform X2 [Benincasa hispida]2.4e-1480.95Show/hide
Query:  NNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMRL
        NN GE+EELCGS+ KKKRKSK K TPQSRSSKK AK KRA+NLTPKKI+H EEATPTIPD+RL
Subjt:  NNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMRL

TrEMBL top hitse value%identityAlignment
A0A0A0L0K9 Uncharacterized protein5.0e-1377.78Show/hide
Query:  NNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMRL
        NN  E+EELCGS+ KKKRKSK KTTPQSRSSKK AK KRA+NLTPKKI++ EE TPTIPD+RL
Subjt:  NNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMRL

A0A5A7TUP8 Putative P-loop containing nucleoside triphosphate hydrolases superfamily protein5.0e-1377.78Show/hide
Query:  NNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMRL
        NN  E+EELCGS+ KKKRKSK KTTPQSRSSKK AK KRA+NLTPKKI++ EE TPTIPD+RL
Subjt:  NNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMRL

A0A5D3D6T0 Putative P-loop containing nucleoside triphosphate hydrolases superfamily protein5.0e-1377.78Show/hide
Query:  NNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMRL
        NN  E+EELCGS+ KKKRKSK KTTPQSRSSKK AK KRA+NLTPKKI++ EE TPTIPD+RL
Subjt:  NNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMRL

A0A6J1CDX4 uncharacterized protein LOC111010770 isoform X25.0e-1375.81Show/hide
Query:  NNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMR
        NN  EDEELCGS+ +KKR+SK KTTPQSRSSKK AK KRA+NLTPKKI+H++EA+PTIPD+R
Subjt:  NNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMR

A0A6J1CEE1 uncharacterized protein LOC111010770 isoform X11.7e-1376.19Show/hide
Query:  NNYGEDEELCGSRNKKKRKSKRKTTPQSRSS-KKQAKAKRAMNLTPKKIVHSEEATPTIPDMR
        NN  EDEELCGS+ +KKR+SK KTTPQSRSS KKQAK KRA+NLTPKKI+H++EA+PTIPD+R
Subjt:  NNYGEDEELCGSRNKKKRKSKRKTTPQSRSS-KKQAKAKRAMNLTPKKIVHSEEATPTIPDMR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGCGGAAGTTGGCGCCACTGAGATCGTTAAACGGTTGCTCAGAAGTGTTCGCCGTCAAGAACAGGAGGAGAATGGAGTCGATCCTGAGAAGGAACAATTACGGTGA
GGATGAGGAGTTATGCGGGAGTCGGAACAAGAAGAAAAGGAAGTCGAAGAGGAAGACGACGCCTCAGTCGAGAAGTTCGAAGAAGCAGGCGAAGGCAAAGCGAGCCATGA
ACTTGACGCCTAAGAAAATTGTTCATTCTGAAGAGGCAACACCGACAATTCCCGACATGCGTCTGTAG
mRNA sequenceShow/hide mRNA sequence
AAATTTAACTTCCCTTTTCCCACCCGAGGTTCCTGCTGTACTCCGGATCACGTTTCGTTACGAACAATGCTTAATCTCATTCTAAGAGATTCTCGACCCTAGCACCCACA
TTTCAGTAATCAGATCACTGACAATTAGGCGTAAATTCATGGACTGACCGGCTGAGCAATCGGGGAATGCGGCGGAAGTTGGCGCCACTGAGATCGTTAAACGGTTGCTC
AGAAGTGTTCGCCGTCAAGAACAGGAGGAGAATGGAGTCGATCCTGAGAAGGAACAATTACGGTGAGGATGAGGAGTTATGCGGGAGTCGGAACAAGAAGAAAAGGAAGT
CGAAGAGGAAGACGACGCCTCAGTCGAGAAGTTCGAAGAAGCAGGCGAAGGCAAAGCGAGCCATGAACTTGACGCCTAAGAAAATTGTTCATTCTGAAGAGGCAACACCG
ACAATTCCCGACATGCGTCTGTAG
Protein sequenceShow/hide protein sequence
MRRKLAPLRSLNGCSEVFAVKNRRRMESILRRNNYGEDEELCGSRNKKKRKSKRKTTPQSRSSKKQAKAKRAMNLTPKKIVHSEEATPTIPDMRL