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Carg17043 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17043
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr09:4284763..4285579
RNA-Seq ExpressionCarg17043
SyntenyCarg17043
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591905.1 hypothetical protein SDJN03_14251, partial [Cucurbita argyrosperma subsp. sororia]1.4e-41100Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSESLS
        MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSESLS
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSESLS

XP_022138625.1 uncharacterized protein LOC111009737 [Momordica charantia]9.1e-3893.62Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSESLS
        MGS E VKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAA+ASV  SES S
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSESLS

XP_022937150.1 uncharacterized protein LOC111443534 [Cucurbita moschata]3.0e-4198.94Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSESLS
        MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVN+SESLS
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSESLS

XP_022976612.1 uncharacterized protein LOC111476955 [Cucurbita maxima]4.0e-4197.87Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSESLS
        MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG+SACEREHAERQMKLLEAQNSAAEASVN+SESLS
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSESLS

XP_038899123.1 uncharacterized protein LOC120086511 [Benincasa hispida]1.2e-3793.68Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAAEASVNQSESLS
        MGSQE VKH+EECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL EAQNSAAEAS+N SES S
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAAEASVNQSESLS

TrEMBL top hitse value%identityAlignment
A0A0B2PI48 Uncharacterized protein2.4e-3689.01Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSE
        MG +E VKHLE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQN+AAE S+ ++E
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSE

A0A6A1UYF7 Uncharacterized protein1.3e-3793.33Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQS
        MG QE VKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAA+AS+N++
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQS

A0A6J1C9Z5 uncharacterized protein LOC1110097374.4e-3893.62Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSESLS
        MGS E VKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAA+ASV  SES S
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSESLS

A0A6J1FFR1 uncharacterized protein LOC1114435341.5e-4198.94Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSESLS
        MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVN+SESLS
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSESLS

A0A6J1IG79 uncharacterized protein LOC1114769551.9e-4197.87Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSESLS
        MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG+SACEREHAERQMKLLEAQNSAAEASVN+SESLS
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSESLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21930.1 unknown protein1.5e-3373.47Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVN----QSESLS
        MGSQE VKHLEEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE QMKLL+   +A   + N    +S S+S
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVN----QSESLS

AT3G42150.1 unknown protein2.7e-3273.12Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAAEASVNQSES
        MGSQ+ VKHLEEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE Q KLL ++QN+    +   +E+
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAAEASVNQSES

AT3G42150.2 unknown protein2.7e-3273.12Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAAEASVNQSES
        MGSQ+ VKHLEEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE Q KLL ++QN+    +   +E+
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAAEASVNQSES

AT3G42150.3 unknown protein2.7e-3273.12Show/hide
Query:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAAEASVNQSES
        MGSQ+ VKHLEEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G+S CEREHAE Q KLL ++QN+    +   +E+
Subjt:  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLL-EAQNSAAEASVNQSES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCCAAGAACAAGTGAAGCATCTTGAGGAGTGCTCAGTTTCAAATGCGCTGGGCACTTGGGTATTCTCAGTAGCAGGAGCGTTGCTAGCAATTCCAGTGGGAAT
AAAGAGGAAGTCACTGGCACCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTTGATATCATAATGGGAATCAGTGCCTGTGAAAGAGAACATGCTGAGCGTCAAATGA
AGCTATTAGAAGCCCAAAACTCTGCAGCCGAAGCTTCTGTTAACCAATCTGAGTCCCTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGCCAAGAACAAGTGAAGCATCTTGAGGAGTGCTCAGTTTCAAATGCGCTGGGCACTTGGGTATTCTCAGTAGCAGGAGCGTTGCTAGCAATTCCAGTGGGAAT
AAAGAGGAAGTCACTGGCACCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTTGATATCATAATGGGAATCAGTGCCTGTGAAAGAGAACATGCTGAGCGTCAAATGA
AGCTATTAGAAGCCCAAAACTCTGCAGCCGAAGCTTCTGTTAACCAATCTGAGTCCCTTTCTTGA
Protein sequenceShow/hide protein sequence
MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSESLS