; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17060 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17060
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr09:4384286..4384900
RNA-Seq ExpressionCarg17060
SyntenyCarg17060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024793.1 hypothetical protein SDJN02_13612, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-108100Show/hide
Query:  MTLVFYSENECNEMRSYPDFTFQNGMPCQYNFLHKVSVSERPDCRSQEQLWRNLAFLYLLPPWPIPYTFPFFWFHFCSLPSQFCLIPITFHGLPTSRIPP
        MTLVFYSENECNEMRSYPDFTFQNGMPCQYNFLHKVSVSERPDCRSQEQLWRNLAFLYLLPPWPIPYTFPFFWFHFCSLPSQFCLIPITFHGLPTSRIPP
Subjt:  MTLVFYSENECNEMRSYPDFTFQNGMPCQYNFLHKVSVSERPDCRSQEQLWRNLAFLYLLPPWPIPYTFPFFWFHFCSLPSQFCLIPITFHGLPTSRIPP

Query:  LLLLVKFITRFFTAFQQLLQFFWTTYRLPEPFVPIILIFFLVLMLSSIFLVLRFFVCLHHHILGIIFIVVVVVISFNPLHYHIFVTGSILVVVVWGITAQ
        LLLLVKFITRFFTAFQQLLQFFWTTYRLPEPFVPIILIFFLVLMLSSIFLVLRFFVCLHHHILGIIFIVVVVVISFNPLHYHIFVTGSILVVVVWGITAQ
Subjt:  LLLLVKFITRFFTAFQQLLQFFWTTYRLPEPFVPIILIFFLVLMLSSIFLVLRFFVCLHHHILGIIFIVVVVVISFNPLHYHIFVTGSILVVVVWGITAQ

Query:  LLLL
        LLLL
Subjt:  LLLL
TrEMBL top hitse value%identityAlignment
A0A0A0L4L0 Uncharacterized protein9.6e-4656.85Show/hide
Query:  MRSYPDFTFQNGMPCQYNFLHKVSVSERPDCRSQEQLWRNLAFLYLLPPWPIPYTFPFFWFHFCSLPSQFCLIPITFHGLPTSRIPPLLLLVKFITRFFT
        +RSYP+FT QN MPCQYNFLHK+ +SERP CRSQEQLWRNL  LYLLPPWPIP   PFF FHF  LPS F LIP+ FHG   S  P +LLL++ I+ F T
Subjt:  MRSYPDFTFQNGMPCQYNFLHKVSVSERPDCRSQEQLWRNLAFLYLLPPWPIPYTFPFFWFHFCSLPSQFCLIPITFHGLPTSRIPPLLLLVKFITRFFT

Query:  AFQQLLQFFWTTYRLPEPFVPIILIFFLVLMLSSIFLVLRFFV------CLHHHILGIIFIVVVVVISFNPLHYHIFVTGSILVVVVWGITAQLLLL
        AF+QLL+ FWTTY LP+P +P+ LIFF  L+   +F+++ F +       LH+ IL  + +V+  ++S NPL  HI V  SI   +VWGIT+QLLLL
Subjt:  AFQQLLQFFWTTYRLPEPFVPIILIFFLVLMLSSIFLVLRFFV------CLHHHILGIIFIVVVVVISFNPLHYHIFVTGSILVVVVWGITAQLLLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTTGTATTCTATTCTGAAAATGAATGCAATGAGATGAGATCATACCCCGATTTCACCTTCCAAAATGGCATGCCTTGTCAATACAATTTCCTTCACAAGGTTTC
TGTAAGTGAAAGGCCTGACTGTAGATCTCAAGAACAGCTCTGGAGGAATTTGGCTTTTCTTTATCTTCTTCCTCCATGGCCCATACCCTATACGTTCCCATTCTTCTGGT
TTCACTTTTGCTCTCTTCCCTCTCAATTCTGTCTCATCCCCATCACCTTCCATGGCCTTCCTACTTCCCGCATTCCGCCCCTTCTGCTTCTCGTAAAATTCATCACTCGC
TTCTTCACTGCGTTTCAACAGCTTCTCCAGTTCTTCTGGACTACTTATCGCCTTCCTGAACCTTTCGTCCCAATAATCCTCATCTTCTTCCTCGTTTTGATGCTCTCCTC
CATCTTCCTCGTCCTCCGCTTCTTCGTTTGTCTCCATCACCACATCCTCGGCATCATCTTCATAGTCGTCGTCGTTGTCATCAGTTTCAATCCACTCCATTACCACATTT
TCGTCACTGGGTCGATTCTCGTTGTCGTCGTCTGGGGCATCACAGCCCAACTCCTCCTCCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCTTGTATTCTATTCTGAAAATGAATGCAATGAGATGAGATCATACCCCGATTTCACCTTCCAAAATGGCATGCCTTGTCAATACAATTTCCTTCACAAGGTTTC
TGTAAGTGAAAGGCCTGACTGTAGATCTCAAGAACAGCTCTGGAGGAATTTGGCTTTTCTTTATCTTCTTCCTCCATGGCCCATACCCTATACGTTCCCATTCTTCTGGT
TTCACTTTTGCTCTCTTCCCTCTCAATTCTGTCTCATCCCCATCACCTTCCATGGCCTTCCTACTTCCCGCATTCCGCCCCTTCTGCTTCTCGTAAAATTCATCACTCGC
TTCTTCACTGCGTTTCAACAGCTTCTCCAGTTCTTCTGGACTACTTATCGCCTTCCTGAACCTTTCGTCCCAATAATCCTCATCTTCTTCCTCGTTTTGATGCTCTCCTC
CATCTTCCTCGTCCTCCGCTTCTTCGTTTGTCTCCATCACCACATCCTCGGCATCATCTTCATAGTCGTCGTCGTTGTCATCAGTTTCAATCCACTCCATTACCACATTT
TCGTCACTGGGTCGATTCTCGTTGTCGTCGTCTGGGGCATCACAGCCCAACTCCTCCTCCTCTAA
Protein sequenceShow/hide protein sequence
MTLVFYSENECNEMRSYPDFTFQNGMPCQYNFLHKVSVSERPDCRSQEQLWRNLAFLYLLPPWPIPYTFPFFWFHFCSLPSQFCLIPITFHGLPTSRIPPLLLLVKFITR
FFTAFQQLLQFFWTTYRLPEPFVPIILIFFLVLMLSSIFLVLRFFVCLHHHILGIIFIVVVVVISFNPLHYHIFVTGSILVVVVWGITAQLLLL