; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17073 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17073
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionExonuclease domain-containing protein
Genome locationCarg_Chr09:4458097..4461382
RNA-Seq ExpressionCarg17073
SyntenyCarg17073
Gene Ontology termsGO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000175 - 3'-5'-exoribonuclease activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024805.1 putative exonuclease domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-157100Show/hide
Query:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL
        MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL
Subjt:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL

Query:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFHRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQLW
        QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFHRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQLW
Subjt:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFHRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQLW

Query:  RKELGGVLDRAAFATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRNPNSPQHVKFRFENRI
        RKELGGVLDRAAFATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRNPNSPQHVKFRFENRI
Subjt:  RKELGGVLDRAAFATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRNPNSPQHVKFRFENRI

XP_004146041.1 uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis sativus]6.7e-12972.92Show/hide
Query:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL
        MF+RA LLK SSFYS+PCH L+P+SLS++ICSSPRTP +IRCHS+ P +H+PSSSA SE  DV  NRWRP CLY+T  +CTMMDDPLHIKKFNHDISREL
Subjt:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL

Query:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH
        QVDVA S HMRTQD ++FLVLDLEGKVEIIEFPVILVNAKT+ VTGFFH   RPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLV+H
Subjt:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH

Query:  QLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
        QLWRKELGGVLDRAAF                                            ATGM TMMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV DG
Subjt:  QLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG

Query:  AHLQITARRNPNSPQHVKFRFENRI
        AHLQ+TARRNP SPQHVKF FENRI
Subjt:  AHLQITARRNPNSPQHVKFRFENRI

XP_022935722.1 uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita moschata]3.8e-14884.31Show/hide
Query:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL
        MFVRAPLLKVSSFYS+PCHSLVPL LS+AICSSPRTPL+IRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL
Subjt:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL

Query:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH
        QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH   RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH
Subjt:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH

Query:  QLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
        QLWRKELGGVLDRAAF                                            ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
Subjt:  QLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG

Query:  AHLQITARRNPNSPQHVKFRFENRI
        AHLQITARRNPNSPQHVKFRFENRI
Subjt:  AHLQITARRNPNSPQHVKFRFENRI

XP_022976542.1 uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita maxima]2.7e-14683.08Show/hide
Query:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL
        MFVRAPLLKVSSFYS+PCHSLVPLSLS+AICSSPRTPLAIRCHSSLPTAH+PSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL
Subjt:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL

Query:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH
        QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH   RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH
Subjt:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH

Query:  QLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
        Q+WRK+LGGVLDRAAF                                            ATGM  MMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
Subjt:  QLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG

Query:  AHLQITARRNPNSPQHVKFRFENRI
        AHLQITARRNPNSPQHVKF FENRI
Subjt:  AHLQITARRNPNSPQHVKFRFENRI

XP_023535410.1 uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita pepo subsp. pepo]1.4e-14784.31Show/hide
Query:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL
        MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAH+PSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLH+KKFNHDISREL
Subjt:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL

Query:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH
        QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH   RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH
Subjt:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH

Query:  QLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
        QLWRKELGGVLDRAAF                                            ATGM TMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
Subjt:  QLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG

Query:  AHLQITARRNPNSPQHVKFRFENRI
        AHLQITARRNPNSPQ VKFRFENRI
Subjt:  AHLQITARRNPNSPQHVKFRFENRI

TrEMBL top hitse value%identityAlignment
A0A0A0L4N2 Exonuclease domain-containing protein3.2e-12972.92Show/hide
Query:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL
        MF+RA LLK SSFYS+PCH L+P+SLS++ICSSPRTP +IRCHS+ P +H+PSSSA SE  DV  NRWRP CLY+T  +CTMMDDPLHIKKFNHDISREL
Subjt:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL

Query:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH
        QVDVA S HMRTQD ++FLVLDLEGKVEIIEFPVILVNAKT+ VTGFFH   RPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLV+H
Subjt:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH

Query:  QLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
        QLWRKELGGVLDRAAF                                            ATGM TMMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV DG
Subjt:  QLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG

Query:  AHLQITARRNPNSPQHVKFRFENRI
        AHLQ+TARRNP SPQHVKF FENRI
Subjt:  AHLQITARRNPNSPQHVKFRFENRI

A0A1S3CJV9 uncharacterized exonuclease domain-containing protein At3g15140 isoform X11.0e-12772.31Show/hide
Query:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL
        MF+RA LLK+SSFYS+PCH L+P+SLS++ICSSPRTP +IRCHS+LP +H+PSSSAPS+  DV  NRWRP CLY+T  +CTMMDDPLHIKKFNHDISREL
Subjt:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL

Query:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH
        QVDVA S HMRTQD+++FLVLDLEGKVEIIEFPVILVNAKT+ VTGFFH   RPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILY DVIQQFEDWLV+H
Subjt:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH

Query:  QLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
        QLWRKE GGVLDRAAF                                            ATGM TMMRQLE+ LVGSHHLGIDDTKNIVRVLQRMV DG
Subjt:  QLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG

Query:  AHLQITARRNPNSPQHVKFRFENRI
        AHLQITARRNP SPQ VKF FENRI
Subjt:  AHLQITARRNPNSPQHVKFRFENRI

A0A6J1CCI3 uncharacterized exonuclease domain-containing protein At3g151401.7e-12272.26Show/hide
Query:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSA-PSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRE
        MF+RAPLLKVSSFYS+PC+ LVPLSL +++ SS RTP  IRCH+SLP AH+PSSSA P  S +   NRWRPMCLYYTQ KCTMMDDPLH+KKFNHDISR 
Subjt:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSA-PSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRE

Query:  LQVDVASSKHMRT--QDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWL
        LQV+ A S H RT  QDI+FFLVLDLEGKVEIIEFPVILV+AKTL VTGFFH   RPS MSERRINEYIEGKYGKFGVDRVWHDTAI YK+VIQQFEDWL
Subjt:  LQVDVASSKHMRT--QDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWL

Query:  VEHQLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMV
        VEHQLW+KELGG LDRAAF                                            ATGMTTMMRQLEIPL+GSHHLGIDDTKNIVRVLQRMV
Subjt:  VEHQLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMV

Query:  ADGAHLQITARRNPNSPQHVKFRFENRI
        ADGA LQITARRNPNSPQHVKF FENRI
Subjt:  ADGAHLQITARRNPNSPQHVKFRFENRI

A0A6J1F6E0 uncharacterized exonuclease domain-containing protein At3g151401.8e-14884.31Show/hide
Query:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL
        MFVRAPLLKVSSFYS+PCHSLVPL LS+AICSSPRTPL+IRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL
Subjt:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL

Query:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH
        QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH   RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH
Subjt:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH

Query:  QLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
        QLWRKELGGVLDRAAF                                            ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
Subjt:  QLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG

Query:  AHLQITARRNPNSPQHVKFRFENRI
        AHLQITARRNPNSPQHVKFRFENRI
Subjt:  AHLQITARRNPNSPQHVKFRFENRI

A0A6J1IG11 uncharacterized exonuclease domain-containing protein At3g151401.3e-14683.08Show/hide
Query:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL
        MFVRAPLLKVSSFYS+PCHSLVPLSLS+AICSSPRTPLAIRCHSSLPTAH+PSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL
Subjt:  MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISREL

Query:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH
        QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH   RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH
Subjt:  QVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEH

Query:  QLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
        Q+WRK+LGGVLDRAAF                                            ATGM  MMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
Subjt:  QLWRKELGGVLDRAAF--------------------------------------------ATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG

Query:  AHLQITARRNPNSPQHVKFRFENRI
        AHLQITARRNPNSPQHVKF FENRI
Subjt:  AHLQITARRNPNSPQHVKFRFENRI

SwissProt top hitse value%identityAlignment
Q5FVR4 3'-5' exoribonuclease 11.1e-0624.71Show/hide
Query:  EIIEFPVILVNAKTLDVTGFFHRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQL----------------------------
        EIIEFPV+L+N  +L++   F +  R      ++  E   G  G+ +   D A  +  V+++  +W+   +L                            
Subjt:  EIIEFPVILVNAKTLDVTGFFHRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQL----------------------------

Query:  ---------W---RKELGGVLDRAAFATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITAR
                 W   RK  G         T +T M+ +L +   G  H G+DD+KNI R+  RM+ DG  L+I  +
Subjt:  ---------W---RKELGGVLDRAAFATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITAR

Q7TMF2 3'-5' exoribonuclease 13.9e-0725.14Show/hide
Query:  EIIEFPVILVNAKTLDVTGFFHRPSRMS-ERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQL---------------------------
        EIIEFPV+L+N  TL++   F +  R     +++E+     G  G+ +   D A  +  V+++  +W+   +L                           
Subjt:  EIIEFPVILVNAKTLDVTGFFHRPSRMS-ERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQL---------------------------

Query:  ----------W---RKELGGVLDRAAFATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITAR
                  W   RK  G         T +T M+ +L +   G  H G+DD+KNI R+  RM+ DG  L+I  +
Subjt:  ----------W---RKELGGVLDRAAFATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITAR

Q8IV48 3'-5' exoribonuclease 12.6e-0625.14Show/hide
Query:  EIIEFPVILVNAKTLDVTGFFHRPSRMS-ERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWL--------------------------VEHQL-
        EIIEFPV+L+N  TL++   F +  R     +++++        G+ +   D A  +  V+++  DW+                          ++ QL 
Subjt:  EIIEFPVILVNAKTLDVTGFFHRPSRMS-ERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWL--------------------------VEHQL-

Query:  ----------W---RKELGGVLDRAAFATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITAR
                  W   RK  G         T +T M+ +L +   G  H G+DD+KNI R+  RM+ DG  L+I  +
Subjt:  ----------W---RKELGGVLDRAAFATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITAR

Q8W566 Uncharacterized exonuclease domain-containing protein At3g151401.6e-6944.38Show/hide
Query:  RAPLLKVSSF----YSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPS--ESLDVVHN-RWRPMCLYYTQSKCTMMDDPLHIKKFNHDI
        R  L ++S F    +S P  +L        +C+S  +       S   ++   SSS+PS    ++   N RWRPMCLYYT  KCT MDDP H++ FNHD 
Subjt:  RAPLLKVSSF----YSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPS--ESLDVVHN-RWRPMCLYYTQSKCTMMDDPLHIKKFNHDI

Query:  SRELQVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDW
        S+EL+V  A  +  ++Q+  FFLV+DLEGKVEI+EFP+++V+AKT++V   FH   RP++MSE+ IN+YIEGKYG+ GVDRVWHDTAI +K V+++FE W
Subjt:  SRELQVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDW

Query:  LVEHQLWRKELGGVLDRAAFAT--------------------------------------------GMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRM
        L EH LW K+    L+ AAF T                                            GM +MMRQ  I L+GSHHLGIDDTKNI RV+QRM
Subjt:  LVEHQLWRKELGGVLDRAAFAT--------------------------------------------GMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRM

Query:  VADGAHLQITARRNPNSPQHVKFRFENRI
        +++GA L++TARR+ ++ ++V+F F+NRI
Subjt:  VADGAHLQITARRNPNSPQHVKFRFENRI

Arabidopsis top hitse value%identityAlignment
AT3G15140.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-7044.38Show/hide
Query:  RAPLLKVSSF----YSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPS--ESLDVVHN-RWRPMCLYYTQSKCTMMDDPLHIKKFNHDI
        R  L ++S F    +S P  +L        +C+S  +       S   ++   SSS+PS    ++   N RWRPMCLYYT  KCT MDDP H++ FNHD 
Subjt:  RAPLLKVSSF----YSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPS--ESLDVVHN-RWRPMCLYYTQSKCTMMDDPLHIKKFNHDI

Query:  SRELQVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDW
        S+EL+V  A  +  ++Q+  FFLV+DLEGKVEI+EFP+++V+AKT++V   FH   RP++MSE+ IN+YIEGKYG+ GVDRVWHDTAI +K V+++FE W
Subjt:  SRELQVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFH---RPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDW

Query:  LVEHQLWRKELGGVLDRAAFAT--------------------------------------------GMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRM
        L EH LW K+    L+ AAF T                                            GM +MMRQ  I L+GSHHLGIDDTKNI RV+QRM
Subjt:  LVEHQLWRKELGGVLDRAAFAT--------------------------------------------GMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRM

Query:  VADGAHLQITARRNPNSPQHVKFRFENRI
        +++GA L++TARR+ ++ ++V+F F+NRI
Subjt:  VADGAHLQITARRNPNSPQHVKFRFENRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTGAGAGCGCCGCTGCTTAAGGTTTCGTCATTCTACTCAGTCCCATGTCATTCTCTGGTTCCGTTGTCTCTCTCTGCCGCAATTTGTTCTTCTCCACGGACACC
TTTAGCTATCCGATGTCATTCATCTCTCCCCACAGCCCACGATCCATCTTCTTCGGCTCCCTCTGAATCCCTCGATGTGGTGCATAATCGTTGGAGGCCCATGTGTTTGT
ATTACACACAGAGCAAGTGTACAATGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGCTCAAAACATATG
CGAACTCAGGATATTGAGTTTTTTCTGGTGCTTGATTTGGAGGGAAAAGTTGAAATAATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACACTGGATGTGACGGGTTT
TTTCCACAGGCCTTCAAGAATGAGTGAACGAAGGATAAATGAGTACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTACA
AGGATGTTATACAGCAGTTCGAAGACTGGCTGGTTGAGCATCAGCTATGGAGGAAGGAACTGGGCGGTGTTCTTGATCGAGCAGCATTCGCGACAGGAATGACGACGATG
ATGAGACAACTCGAAATACCCTTGGTGGGAAGCCATCATCTTGGTATAGATGACACAAAGAACATCGTGAGAGTGTTGCAGAGAATGGTCGCTGATGGTGCGCATTTGCA
GATCACTGCTCGTAGGAATCCCAATTCTCCTCAACATGTTAAGTTTCGTTTTGAGAACCGTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTGAGAGCGCCGCTGCTTAAGGTTTCGTCATTCTACTCAGTCCCATGTCATTCTCTGGTTCCGTTGTCTCTCTCTGCCGCAATTTGTTCTTCTCCACGGACACC
TTTAGCTATCCGATGTCATTCATCTCTCCCCACAGCCCACGATCCATCTTCTTCGGCTCCCTCTGAATCCCTCGATGTGGTGCATAATCGTTGGAGGCCCATGTGTTTGT
ATTACACACAGAGCAAGTGTACAATGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGCTCAAAACATATG
CGAACTCAGGATATTGAGTTTTTTCTGGTGCTTGATTTGGAGGGAAAAGTTGAAATAATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACACTGGATGTGACGGGTTT
TTTCCACAGGCCTTCAAGAATGAGTGAACGAAGGATAAATGAGTACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTACA
AGGATGTTATACAGCAGTTCGAAGACTGGCTGGTTGAGCATCAGCTATGGAGGAAGGAACTGGGCGGTGTTCTTGATCGAGCAGCATTCGCGACAGGAATGACGACGATG
ATGAGACAACTCGAAATACCCTTGGTGGGAAGCCATCATCTTGGTATAGATGACACAAAGAACATCGTGAGAGTGTTGCAGAGAATGGTCGCTGATGGTGCGCATTTGCA
GATCACTGCTCGTAGGAATCCCAATTCTCCTCAACATGTTAAGTTTCGTTTTGAGAACCGTATTTAA
Protein sequenceShow/hide protein sequence
MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHM
RTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFHRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFATGMTTM
MRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRNPNSPQHVKFRFENRI