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Carg17142 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17142
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr01:12661240..12663147
RNA-Seq ExpressionCarg17142
SyntenyCarg17142
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037856.1 hypothetical protein SDJN02_01487, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-93100Show/hide
Query:  MDIIDTNHCCRLSESQVRTSKPTPTPIPKQIPSPIPTPTLTPELNQDSSPSSLSMLSVPQYIVFVKTTGFPEKLPAMYTSIFGLINCCPAMSFPFKNAAS
        MDIIDTNHCCRLSESQVRTSKPTPTPIPKQIPSPIPTPTLTPELNQDSSPSSLSMLSVPQYIVFVKTTGFPEKLPAMYTSIFGLINCCPAMSFPFKNAAS
Subjt:  MDIIDTNHCCRLSESQVRTSKPTPTPIPKQIPSPIPTPTLTPELNQDSSPSSLSMLSVPQYIVFVKTTGFPEKLPAMYTSIFGLINCCPAMSFPFKNAAS

Query:  ATTPDSQFMLHFFLEELIEMTTFSKSSQGDKRRKKSKFKYTTQKQRQQRNECMKGGGEFYHQNQYNRAQIAKTVKRKE
        ATTPDSQFMLHFFLEELIEMTTFSKSSQGDKRRKKSKFKYTTQKQRQQRNECMKGGGEFYHQNQYNRAQIAKTVKRKE
Subjt:  ATTPDSQFMLHFFLEELIEMTTFSKSSQGDKRRKKSKFKYTTQKQRQQRNECMKGGGEFYHQNQYNRAQIAKTVKRKE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATTATTGACACAAATCATTGCTGTCGGCTTTCTGAATCTCAAGTGCGCACGAGCAAGCCAACTCCTACACCAATACCCAAGCAGATACCAAGTCCGATTCCTAC
ACCAACCCTCACGCCCGAGTTGAACCAGGATAGTTCACCATCTTCTCTTTCCATGTTGTCTGTTCCCCAGTACATAGTTTTCGTTAAGACAACGGGGTTTCCAGAAAAGC
TACCAGCAATGTACACTTCAATTTTTGGACTGATAAATTGCTGTCCTGCAATGAGCTTTCCCTTCAAGAATGCAGCATCAGCAACAACCCCAGATTCACAGTTCATGCTC
CATTTTTTCTTAGAAGAATTGATAGAGATGACTACATTCAGCAAATCCAGCCAAGGAGATAAAAGGAGAAAGAAATCAAAATTCAAATATACAACACAGAAACAGAGGCA
GCAGAGGAATGAATGCATGAAAGGAGGTGGAGAATTCTACCACCAAAATCAATACAACAGGGCCCAAATTGCAAAAACTGTGAAGAGGAAGGAG
mRNA sequenceShow/hide mRNA sequence
ATGGATATTATTGACACAAATCATTGCTGTCGGCTTTCTGAATCTCAAGTGCGCACGAGCAAGCCAACTCCTACACCAATACCCAAGCAGATACCAAGTCCGATTCCTAC
ACCAACCCTCACGCCCGAGTTGAACCAGGATAGTTCACCATCTTCTCTTTCCATGTTGTCTGTTCCCCAGTACATAGTTTTCGTTAAGACAACGGGGTTTCCAGAAAAGC
TACCAGCAATGTACACTTCAATTTTTGGACTGATAAATTGCTGTCCTGCAATGAGCTTTCCCTTCAAGAATGCAGCATCAGCAACAACCCCAGATTCACAGTTCATGCTC
CATTTTTTCTTAGAAGAATTGATAGAGATGACTACATTCAGCAAATCCAGCCAAGGAGATAAAAGGAGAAAGAAATCAAAATTCAAATATACAACACAGAAACAGAGGCA
GCAGAGGAATGAATGCATGAAAGGAGGTGGAGAATTCTACCACCAAAATCAATACAACAGGGCCCAAATTGCAAAAACTGTGAAGAGGAAGGAG
Protein sequenceShow/hide protein sequence
MDIIDTNHCCRLSESQVRTSKPTPTPIPKQIPSPIPTPTLTPELNQDSSPSSLSMLSVPQYIVFVKTTGFPEKLPAMYTSIFGLINCCPAMSFPFKNAASATTPDSQFML
HFFLEELIEMTTFSKSSQGDKRRKKSKFKYTTQKQRQQRNECMKGGGEFYHQNQYNRAQIAKTVKRKE