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Carg17159 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17159
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
Genome locationCarg_Chr01:12757038..12757848
RNA-Seq ExpressionCarg17159
SyntenyCarg17159
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037873.1 AAA-ATPase, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-51100Show/hide
Query:  MMSSPQESLSSSMTILSGVASLTVSITVADYWGSIDLNHPAIFDTPVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANY
        MMSSPQESLSSSMTILSGVASLTVSITVADYWGSIDLNHPAIFDTPVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANY
Subjt:  MMSSPQESLSSSMTILSGVASLTVSITVADYWGSIDLNHPAIFDTPVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANY

Query:  LKFDI
        LKFDI
Subjt:  LKFDI

XP_004147876.2 AAA-ATPase At3g50940 [Cucumis sativus]8.4e-2469.05Show/hide
Query:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        T+      YWGSIDLNHPA FDT  +NPET+KALI  L  F+ RKEYY+RVG+AWKR +LLY P GTGKSSL+A MANYLKFDI
Subjt:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

XP_008466531.1 PREDICTED: AAA-ATPase At3g50940-like [Cucumis melo]9.9e-2571.43Show/hide
Query:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        T+  +  DYWGSIDLNHPA FDT  +NPET+KALI  L  F+ RKEYYKRVG+AWKR +LLY P GTGKSSLVA +ANYLKFDI
Subjt:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

XP_022142231.1 AAA-ATPase At3g50940-like [Momordica charantia]2.0e-2572.62Show/hide
Query:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        T+  +  DYWGSIDLNHPA FDT  +NPET++ALI  L KF+ RK+YYKRVGKAWKR +LLY P GTGKSSLVA MANYLKFDI
Subjt:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

XP_038899291.1 AAA-ATPase At3g50940-like [Benincasa hispida]8.9e-2673.81Show/hide
Query:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        T+  +  DYWGSIDLNHPA FDT  +NPET+K LI  L KF+ RKEYYKRVGKAWKR +LLY P GTGKSSLVA MANYLKFDI
Subjt:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

TrEMBL top hitse value%identityAlignment
A0A0A0LG59 AAA domain-containing protein4.1e-2469.05Show/hide
Query:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        T+      YWGSIDLNHPA FDT  +NPET+KALI  L  F+ RKEYY+RVG+AWKR +LLY P GTGKSSL+A MANYLKFDI
Subjt:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

A0A1S3CSS5 AAA-ATPase At3g50940-like4.8e-2571.43Show/hide
Query:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        T+  +  DYWGSIDLNHPA FDT  +NPET+KALI  L  F+ RKEYYKRVG+AWKR +LLY P GTGKSSLVA +ANYLKFDI
Subjt:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

A0A2P5F6K3 Spastin3.4e-2367.86Show/hide
Query:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        TV  +  DYW  I+LNHPA F+T  +NPET+K LI  L +F+ RKEYY+RVGKAWKR +LLY P GTGKSSLVA MANYLKFDI
Subjt:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

A0A5D3D837 AAA-ATPase4.8e-2571.43Show/hide
Query:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        T+  +  DYWGSIDLNHPA FDT  +NPET+KALI  L  F+ RKEYYKRVG+AWKR +LLY P GTGKSSLVA +ANYLKFDI
Subjt:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

A0A6J1CLL4 AAA-ATPase At3g50940-like9.6e-2672.62Show/hide
Query:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        T+  +  DYWGSIDLNHPA FDT  +NPET++ALI  L KF+ RK+YYKRVGKAWKR +LLY P GTGKSSLVA MANYLKFDI
Subjt:  TVSITVADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

SwissProt top hitse value%identityAlignment
F4IQG2 AAA-ATPase At2g181904.5e-2058.67Show/hide
Query:  WGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        WG I+L HP+ F+T  ++P  +K +I  +++F+ R+E+YKRVGKAWKR +LLY P GTGKSSL+A MANYLKFD+
Subjt:  WGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

F4KID5 AAA-ATPase At5g177501.9e-1857.33Show/hide
Query:  WGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        W S+   HP+ F T  + P+ + +++  L +F+ RK+YYKRVGKAWKR + LY P GTGKSSLVA MANYLKFDI
Subjt:  WGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

Q8GW96 AAA-ATPase At2g181932.4e-2162.67Show/hide
Query:  WGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        WG I+L HP+ FDT  ++P  +K +I  L++F+ RKE+YKRVGKAWKR +LLY P GTGKSSL+A MANYLKFD+
Subjt:  WGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

Q9FN77 AAA-ATPase At5g177403.1e-2160.76Show/hide
Query:  VADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        +A  W S++  HP+ FDT  +N + ++++I  L +FVGRK++YKRVGKAWKR +LLY P GTGKSSLVA MANYLKFDI
Subjt:  VADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

Q9FN78 AAA-ATPase At5g177309.9e-2058.67Show/hide
Query:  WGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        W S++L HP+ FDT  +N E +++++G L +F+ RK++YKRVGK WKR +LLY P GTGK+SLVA +ANYLKFDI
Subjt:  WGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

Arabidopsis top hitse value%identityAlignment
AT2G18190.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein3.2e-2158.67Show/hide
Query:  WGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        WG I+L HP+ F+T  ++P  +K +I  +++F+ R+E+YKRVGKAWKR +LLY P GTGKSSL+A MANYLKFD+
Subjt:  WGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

AT2G18193.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.7e-2262.67Show/hide
Query:  WGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        WG I+L HP+ FDT  ++P  +K +I  L++F+ RKE+YKRVGKAWKR +LLY P GTGKSSL+A MANYLKFD+
Subjt:  WGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

AT5G17730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein7.1e-2158.67Show/hide
Query:  WGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        W S++L HP+ FDT  +N E +++++G L +F+ RK++YKRVGK WKR +LLY P GTGK+SLVA +ANYLKFDI
Subjt:  WGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

AT5G17740.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.2e-2260.76Show/hide
Query:  VADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        +A  W S++  HP+ FDT  +N + ++++I  L +FVGRK++YKRVGKAWKR +LLY P GTGKSSLVA MANYLKFDI
Subjt:  VADYWGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI

AT5G17750.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.3e-1957.33Show/hide
Query:  WGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI
        W S+   HP+ F T  + P+ + +++  L +F+ RK+YYKRVGKAWKR + LY P GTGKSSLVA MANYLKFDI
Subjt:  WGSIDLNHPAIFDT-PVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCGAGTCCTCAGGAGAGCTTGTCTTCGTCCATGACCATCCTATCGGGGGTGGCATCACTCACCGTCTCGATTACAGTGGCAGATTATTGGGGTTCAATCGATCT
TAATCATCCTGCAATATTTGACACACCCGTGAACCCGGAAACTCAGAAGGCACTAATCGGCTATCTCAAAAAGTTTGTTGGGAGGAAAGAGTACTATAAAAGAGTAGGAA
AGGCTTGGAAACGTGAGCATTTGTTGTATGAACCAAGAGGTACAGGGAAGTCAAGCTTGGTTGCTCCCATGGCTAACTATCTGAAGTTTGACATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGTCGAGTCCTCAGGAGAGCTTGTCTTCGTCCATGACCATCCTATCGGGGGTGGCATCACTCACCGTCTCGATTACAGTGGCAGATTATTGGGGTTCAATCGATCT
TAATCATCCTGCAATATTTGACACACCCGTGAACCCGGAAACTCAGAAGGCACTAATCGGCTATCTCAAAAAGTTTGTTGGGAGGAAAGAGTACTATAAAAGAGTAGGAA
AGGCTTGGAAACGTGAGCATTTGTTGTATGAACCAAGAGGTACAGGGAAGTCAAGCTTGGTTGCTCCCATGGCTAACTATCTGAAGTTTGACATTTAG
Protein sequenceShow/hide protein sequence
MMSSPQESLSSSMTILSGVASLTVSITVADYWGSIDLNHPAIFDTPVNPETQKALIGYLKKFVGRKEYYKRVGKAWKREHLLYEPRGTGKSSLVAPMANYLKFDI