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Carg17167 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17167
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionThioredoxin
Genome locationCarg_Chr01:12800636..12801725
RNA-Seq ExpressionCarg17167
SyntenyCarg17167
Gene Ontology termsGO:0006662 - glycerol ether metabolic process (biological process)
GO:0015035 - protein disulfide oxidoreductase activity (molecular function)
InterPro domainsIPR013766 - Thioredoxin domain
IPR017937 - Thioredoxin, conserved site
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608561.1 Thioredoxin H1, partial [Cucurbita argyrosperma subsp. sororia]1.8e-56100Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQNA
        KDQLQKIVLQNA
Subjt:  KDQLQKIVLQNA

KAG7037881.1 Thioredoxin H1 [Cucurbita argyrosperma subsp. argyrosperma]1.8e-56100Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQNA
        KDQLQKIVLQNA
Subjt:  KDQLQKIVLQNA

XP_022941032.1 thioredoxin H1-like [Cucurbita moschata]5.2e-5699.11Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTA WCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQNA
        KDQLQKIVLQNA
Subjt:  KDQLQKIVLQNA

XP_022982430.1 thioredoxin H1-like [Cucurbita maxima]7.5e-5597.32Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAGKGEVIAC TVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKK+SNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQNA
        KDQLQKIVLQ+A
Subjt:  KDQLQKIVLQNA

XP_023525273.1 thioredoxin H1-like [Cucurbita pepo subsp. pepo]1.2e-5598.21Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAGKGEVIAC TVGSWKQQ+LKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQNA
        KDQLQKIVLQNA
Subjt:  KDQLQKIVLQNA

TrEMBL top hitse value%identityAlignment
A0A5A7V9W3 Thioredoxin4.0e-4683.04Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MA K +VI C TV SWKQQLLKGKQS+KLIVVDFTAAWCGPCRA+APVF ELA+KMSNVIFLKVDVD+L  VAAEWGVSALPCFMFLKNG VVDRFVGAR
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQNA
        KD L+K+VL +A
Subjt:  KDQLQKIVLQNA

A0A6J1DWZ0 thioredoxin H1-like4.3e-4885.71Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        M  K EVIAC TVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAP+FAELA KMS+VIFLKVDVDEL  VAAEWGVSALPCF+FLKNG +VDRFVGAR
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQNA
        +D LQKI+LQ+A
Subjt:  KDQLQKIVLQNA

A0A6J1FL98 thioredoxin H1-like2.5e-5699.11Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTA WCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQNA
        KDQLQKIVLQNA
Subjt:  KDQLQKIVLQNA

A0A6J1IM69 thioredoxin H-type-like2.1e-4786.61Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MA    VI C TVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRA+AP FAELAKKMSNVIFLKVDVD+L  VAAEWGV ALPCFMFLKNGKVV RFVGAR
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQNA
        KD LQKIVLQ+A
Subjt:  KDQLQKIVLQNA

A0A6J1IZB4 thioredoxin H1-like3.6e-5597.32Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAGKGEVIAC TVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKK+SNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQNA
        KDQLQKIVLQ+A
Subjt:  KDQLQKIVLQNA

SwissProt top hitse value%identityAlignment
P29448 Thioredoxin H12.4e-3558.33Show/hide
Query:  KGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQ
        +G+VIAC TV +W +QL K  +S  L+VVDFTA+WCGPCR +AP FA+LAKK+ NV+FLKVD DEL +VA++W + A+P FMFLK GK++D+ VGA+KD+
Subjt:  KGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQ

Query:  LQKIVLQN
        LQ  + ++
Subjt:  LQKIVLQN

P29449 Thioredoxin H-type 11.3e-3355.96Show/hide
Query:  KGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQ
        +G+V  C  V  W +   KG ++ KL+VVDFTA+WCGPCR +AP+ A++AKKM +VIFLKVDVDEL  V+AEW V A+P F+F+K+GK VDR VGA+K++
Subjt:  KGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQ

Query:  LQKIVLQNA
        LQ+ ++++A
Subjt:  LQKIVLQNA

Q07090 Thioredoxin H-type 21.7e-3358.56Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MA +G+VI   TV +W + L KG    KLIVVDFTA+WCGPC+ +A  +AELAKKM  V FLKVDVDEL +VA +W V A+P FMFLK GK+VD+ VGA+
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQN
        KD+LQ+ + ++
Subjt:  KDQLQKIVLQN

Q39241 Thioredoxin H53.8e-3354.95Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAG+GEVIAC T+  W +++    +S KLIV+DFTA+WC PCR +APVFAE+AKK +NV+F K+DVDEL AVA E+ V A+P F+F+K G ++DR VGA 
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQN
        KD++ + ++++
Subjt:  KDQLQKIVLQN

Q43636 Thioredoxin H-type8.9e-3560Show/hide
Query:  AGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARK
        A +G+VI C TV +W +QL KG  +  LIVVDFTA+WCGPCR +AP  AELAKK+ NV FLKVDVDEL  VA EW V ++P FMFLK GK++D+ VGA+K
Subjt:  AGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARK

Query:  DQLQKIVLQN
        D+LQ+ + ++
Subjt:  DQLQKIVLQN

Arabidopsis top hitse value%identityAlignment
AT1G19730.1 Thioredoxin superfamily protein4.3e-3257.66Show/hide
Query:  AGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKK-MSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        A +G+VI C T   W  QL K K+SNKLIV+DFTA+WC PCR +AP+F +LAKK MS+ IF KVDVDEL +VA E+GV A+P F+F+K G+VVD+ VGA 
Subjt:  AGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKK-MSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQN
        K+ LQ  ++++
Subjt:  KDQLQKIVLQN

AT1G45145.1 thioredoxin H-type 52.7e-3454.95Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAG+GEVIAC T+  W +++    +S KLIV+DFTA+WC PCR +APVFAE+AKK +NV+F K+DVDEL AVA E+ V A+P F+F+K G ++DR VGA 
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQN
        KD++ + ++++
Subjt:  KDQLQKIVLQN

AT3G17880.1 tetraticopeptide domain-containing thioredoxin7.3e-2441.67Show/hide
Query:  GEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQL
        GEVI+  +    + +    K++++L+++ FTA WCGPCR M+P+++ LA + S V+FLKVD+D+   VAA W +S++P F F+++GK VD+ VGA K  L
Subjt:  GEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQL

Query:  QKIVLQNA
        ++ + Q++
Subjt:  QKIVLQNA

AT3G51030.1 thioredoxin H-type 11.7e-3658.33Show/hide
Query:  KGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQ
        +G+VIAC TV +W +QL K  +S  L+VVDFTA+WCGPCR +AP FA+LAKK+ NV+FLKVD DEL +VA++W + A+P FMFLK GK++D+ VGA+KD+
Subjt:  KGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQ

Query:  LQKIVLQN
        LQ  + ++
Subjt:  LQKIVLQN

AT5G42980.1 thioredoxin 35.2e-3055.77Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MA +GEVIAC TV  W ++L    +S KLIV+DFTA WC PCR +APVFA+LAKK  +V+F KVDVDEL  VA E+ V A+P F+F+K G++ +  VGA 
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQL
        K+++
Subjt:  KDQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGAAAGGGCGAAGTGATTGCGTGCCGTACCGTTGGATCATGGAAGCAGCAGCTCCTCAAAGGAAAACAATCCAATAAACTGATTGTTGTGGACTTCACTGCCGC
ATGGTGCGGTCCATGCCGTGCCATGGCTCCAGTTTTTGCGGAGTTGGCTAAGAAGATGAGTAATGTCATATTCTTGAAAGTCGATGTTGATGAATTGATGGCTGTTGCGG
CGGAATGGGGTGTGAGTGCACTCCCTTGCTTCATGTTCTTGAAGAATGGGAAGGTGGTGGACAGGTTTGTAGGCGCAAGAAAAGATCAGTTGCAGAAGATTGTATTACAG
AATGCCTAA
mRNA sequenceShow/hide mRNA sequence
TATCCGATTATGCCTTGGTTGTATTTGATCTGTCGAAACGCACTCCCATCGTCGAGCGTTGGAAGGAAATTTGTTCAGATTCTTGAAGATGAGAAAGCGGAGCGCTCGTA
GGCTTCCGGATGGTTCGATATGCGCCGCAAATGGGGTTTTGCTGTTTGCACGTTCATTTCCTTGTCTTCTTTTTCTACTACTACTACTATAAATTGAGACGATCGGATCG
ATAATGGCGGGAAAGGGCGAAGTGATTGCGTGCCGTACCGTTGGATCATGGAAGCAGCAGCTCCTCAAAGGAAAACAATCCAATAAACTGATTGTTGTGGACTTCACTGC
CGCATGGTGCGGTCCATGCCGTGCCATGGCTCCAGTTTTTGCGGAGTTGGCTAAGAAGATGAGTAATGTCATATTCTTGAAAGTCGATGTTGATGAATTGATGGCTGTTG
CGGCGGAATGGGGTGTGAGTGCACTCCCTTGCTTCATGTTCTTGAAGAATGGGAAGGTGGTGGACAGGTTTGTAGGCGCAAGAAAAGATCAGTTGCAGAAGATTGTATTA
CAGAATGCCTAATGGAAACTCTACGTTGGGGAGATTCCCTCATCTGTTCTTTGTTTTTTATGAAAATCAAAATTTTATGCAACTTTTGTGAGTTGCTAATAGTTGATGCA
TTTAGTTTGAACAATTTTTTTCTTCTGTGTTGGATTGTTTTTCAATCAGTTTACTATTACGAGACTATGTAATCAATGAACATCTATTCTTTTGTTGAATAAAAATGAG
Protein sequenceShow/hide protein sequence
MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTAAWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQLQKIVLQ
NA