; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg17175 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg17175
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionglycine-rich RNA-binding protein 2-like
Genome locationCarg_Chr01:12834553..12835357
RNA-Seq ExpressionCarg17175
SyntenyCarg17175
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608571.1 hypothetical protein SDJN03_01913, partial [Cucurbita argyrosperma subsp. sororia]3.7e-9589.96Show/hide
Query:  MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNK-----------------IFFGVAVYGSRAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSK
        MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNK                 +FFGVAVYGSRAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSK
Subjt:  MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNK-----------------IFFGVAVYGSRAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSK

Query:  QNRGGGGGYGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRL
        QNRGGGGGYGWGW     GGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRL
Subjt:  QNRGGGGGYGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRL

Query:  DCPLHCGGPCFYDCRYMCKAHCRRRRRRL
        DCPLHCGGPCFYDCRYMCKAHCRRRRRRL
Subjt:  DCPLHCGGPCFYDCRYMCKAHCRRRRRRL

KAG7037889.1 hypothetical protein SDJN02_01520, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-101100Show/hide
Query:  MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKIFFGVAVYGSRAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGWGGGG
        MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKIFFGVAVYGSRAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGWGGGG
Subjt:  MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKIFFGVAVYGSRAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGWGGGG

Query:  GGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYM
        GGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYM
Subjt:  GGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYM

Query:  CKAHCRRRRRRL
        CKAHCRRRRRRL
Subjt:  CKAHCRRRRRRL

XP_008455258.1 PREDICTED: keratin, type II cytoskeletal 1 [Cucumis melo]3.9e-5277.6Show/hide
Query:  IFFGVAVYGSR-AEGLKNG------TFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGGG
        +     +YGSR AEGL NG      TFLTFSELP+ NAGE RNSS NT+TVEVSKQN GGGGG G+GW G G GGGGGGGGGGGGGGGGGGGGWGWGGGG
Subjt:  IFFGVAVYGSR-AEGLKNG------TFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGGG

Query:  GGWWKWGCGGQP---KSGRR-GGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
        GGWWKWGCGG+P   K GRR   GRRKNV RK++YNE+DY MGEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC R
Subjt:  GGWWKWGCGGQP---KSGRR-GGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR

XP_011659711.1 keratin, type II cytoskeletal 2 epidermal [Cucumis sativus]4.3e-5174.05Show/hide
Query:  IFFGVAVYGSR-AEGLKNG------TFLTFSELPRGNAGEGRNSSGNTTTVEVSKQN-RGGGGGYGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGG
        +     + GSR AEGL NG      TFLTFSELP+ NAGE RNSS N+TTVEVSKQN  GGGGGYGWGW      G GGGGGGGGGGGGGGGGGWGWGGG
Subjt:  IFFGVAVYGSR-AEGLKNG------TFLTFSELPRGNAGEGRNSSGNTTTVEVSKQN-RGGGGGYGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGG

Query:  GGGWWKWGCGGQPKSGRRG----GGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRR
        GGGWWKWGCGGQPKS R G     G  +NV  KR+Y+E+DY MGEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC RR
Subjt:  GGGWWKWGCGGQPKSGRRG----GGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRR

XP_022940700.1 glycine-rich RNA-binding protein 2-like [Cucurbita moschata]3.9e-8988.58Show/hide
Query:  MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKI------------FFGVAVYGSRAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGG
        MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNK             + G+AVYGSRAEGLKNGTFLTFSELP GNAGEGRNSSGNTTTVEVSKQNRGG
Subjt:  MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKI------------FFGVAVYGSRAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGG

Query:  GGGYGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLH
        GGGYGWGW      GGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRKNVDRKRIYNEEDYS+GEFAECMVKGRCRGMRLDCPLH
Subjt:  GGGYGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLH

Query:  CGGPCFYDCRYMCKAHCRR
        CGGPCFYDCR+MCKAHCRR
Subjt:  CGGPCFYDCRYMCKAHCRR

TrEMBL top hitse value%identityAlignment
A0A0A0K766 Uncharacterized protein2.1e-5174.05Show/hide
Query:  IFFGVAVYGSR-AEGLKNG------TFLTFSELPRGNAGEGRNSSGNTTTVEVSKQN-RGGGGGYGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGG
        +     + GSR AEGL NG      TFLTFSELP+ NAGE RNSS N+TTVEVSKQN  GGGGGYGWGW      G GGGGGGGGGGGGGGGGGWGWGGG
Subjt:  IFFGVAVYGSR-AEGLKNG------TFLTFSELPRGNAGEGRNSSGNTTTVEVSKQN-RGGGGGYGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGG

Query:  GGGWWKWGCGGQPKSGRRG----GGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRR
        GGGWWKWGCGGQPKS R G     G  +NV  KR+Y+E+DY MGEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC RR
Subjt:  GGGWWKWGCGGQPKSGRRG----GGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRR

A0A1S3C029 keratin, type II cytoskeletal 11.9e-5277.6Show/hide
Query:  IFFGVAVYGSR-AEGLKNG------TFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGGG
        +     +YGSR AEGL NG      TFLTFSELP+ NAGE RNSS NT+TVEVSKQN GGGGG G+GW G G GGGGGGGGGGGGGGGGGGGGWGWGGGG
Subjt:  IFFGVAVYGSR-AEGLKNG------TFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGGG

Query:  GGWWKWGCGGQP---KSGRR-GGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
        GGWWKWGCGG+P   K GRR   GRRKNV RK++YNE+DY MGEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC R
Subjt:  GGWWKWGCGGQP---KSGRR-GGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR

A0A251R9W7 Uncharacterized protein3.1e-3156.84Show/hide
Query:  AEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNR------------GGGGGYGWGWGGGGGGGGG----GGGGGGGGGGGGGGGGWGWGGGGG-
        ++G    + L  +E+P G  G+ RN +  + T +V   N+            GGGGGY WGWGGGGGGGGG    GGGGGGGGGGGGGGGGWGWGGGGG 
Subjt:  AEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNR------------GGGGGYGWGWGGGGGGGGG----GGGGGGGGGGGGGGGGWGWGGGGG-

Query:  -GWWKWGCGGQPKSGRRGGGRRKN---------VDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRRR
         GWWKWGCGG    G R G R  +            KR ++E DY++GEFA+CM KGRC+GMRLDCPLHCGGPC+YDC+YMCKAHC+RRR
Subjt:  -GWWKWGCGGQPKSGRRGGGRRKN---------VDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRRR

A0A6J1FRC8 glycine-rich RNA-binding protein 2-like1.9e-8988.58Show/hide
Query:  MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKI------------FFGVAVYGSRAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGG
        MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNK             + G+AVYGSRAEGLKNGTFLTFSELP GNAGEGRNSSGNTTTVEVSKQNRGG
Subjt:  MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKI------------FFGVAVYGSRAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGG

Query:  GGGYGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLH
        GGGYGWGW      GGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRKNVDRKRIYNEEDYS+GEFAECMVKGRCRGMRLDCPLH
Subjt:  GGGYGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLH

Query:  CGGPCFYDCRYMCKAHCRR
        CGGPCFYDCR+MCKAHCRR
Subjt:  CGGPCFYDCRYMCKAHCRR

A0A7J7HUV4 Uncharacterized protein1.8e-3168.57Show/hide
Query:  NTTTVEV----SKQNRGGGGG---YGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRKNVDRKRIYNEEDYSMG
        N T V V    +K NRGGGGG   +GWGW    GGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWW WGC    +  R+  G   ++  KR++N EDY +G
Subjt:  NTTTVEV----SKQNRGGGGG---YGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRKNVDRKRIYNEEDYSMG

Query:  EFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
        EFA+CMV+GRCRGMRLDCPLHCGGPCFYDC++MCKAHCRR
Subjt:  EFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G75550.1 glycine-rich protein5.4e-2056.16Show/hide
Query:  EGRNSSGNTTTVEV-----SKQNRGGGGGYGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPK-SGRRGGGRRKNVDRKRIYNE
        +  N+  N+TT  V      +   GG G Y WGWGGGGGGGGGGGGGGGGGGGGGGG GWG GGGGGGW+KWGCGG  K  GR G G             
Subjt:  EGRNSSGNTTTVEV-----SKQNRGGGGGYGWGWGGGGGGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPK-SGRRGGGRRKNVDRKRIYNE

Query:  EDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
         ++   E+AEC  +G+C G RL+CP HCGG CFYDC ++CK HCRR
Subjt:  EDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACTCGCAAAAGAAGTCGATTTGGTGAATGTGGGCAACAGTGCTTTAGTTAAGCGGTATGGCGTTGTTGATTTTGCAATGCAAGTGGGGGGACAGAACAAAATTTT
TTTTGGAGTAGCGGTTTATGGGTCGAGAGCTGAGGGTTTGAAAAATGGCACTTTCTTAACATTCTCCGAGCTGCCACGGGGAAATGCAGGGGAGGGGAGAAACAGTTCTG
GTAATACTACTACGGTTGAGGTTAGCAAGCAGAACAGGGGAGGAGGCGGTGGGTATGGGTGGGGATGGGGCGGAGGCGGTGGAGGTGGAGGTGGAGGGGGTGGAGGTGGT
GGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGATGGGGATGGGGAGGAGGGGGAGGTGGGTGGTGGAAATGGGGTTGTGGTGGACAGCCAAAATCTGGCAGACGCGGCGG
TGGGAGAAGGAAAAATGTAGACAGGAAGAGAATATACAATGAGGAAGATTACAGTATGGGAGAATTTGCGGAATGTATGGTGAAAGGAAGATGCAGAGGCATGAGATTGG
ACTGTCCGCTTCACTGCGGCGGGCCTTGCTTTTACGACTGTCGATACATGTGCAAGGCTCACTGCCGACGCCGACGCCGACGCCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACACTCGCAAAAGAAGTCGATTTGGTGAATGTGGGCAACAGTGCTTTAGTTAAGCGGTATGGCGTTGTTGATTTTGCAATGCAAGTGGGGGGACAGAACAAAATTTT
TTTTGGAGTAGCGGTTTATGGGTCGAGAGCTGAGGGTTTGAAAAATGGCACTTTCTTAACATTCTCCGAGCTGCCACGGGGAAATGCAGGGGAGGGGAGAAACAGTTCTG
GTAATACTACTACGGTTGAGGTTAGCAAGCAGAACAGGGGAGGAGGCGGTGGGTATGGGTGGGGATGGGGCGGAGGCGGTGGAGGTGGAGGTGGAGGGGGTGGAGGTGGT
GGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGATGGGGATGGGGAGGAGGGGGAGGTGGGTGGTGGAAATGGGGTTGTGGTGGACAGCCAAAATCTGGCAGACGCGGCGG
TGGGAGAAGGAAAAATGTAGACAGGAAGAGAATATACAATGAGGAAGATTACAGTATGGGAGAATTTGCGGAATGTATGGTGAAAGGAAGATGCAGAGGCATGAGATTGG
ACTGTCCGCTTCACTGCGGCGGGCCTTGCTTTTACGACTGTCGATACATGTGCAAGGCTCACTGCCGACGCCGACGCCGACGCCTGTAA
Protein sequenceShow/hide protein sequence
MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKIFFGVAVYGSRAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGWGGGGGGGGGGGGGG
GGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSGRRGGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRRRRRL