CuGenDBv2

Gene ID	Carg17176
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein LTV1 homolog
Genome location	Carg_Chr01:12835838..12841107
RNA-Seq Expression	Carg17176
Synteny	Carg17176
Gene Ontology terms	GO:0042274 - ribosomal small subunit biogenesis (biological process)
InterPro domains	IPR007307 - Low temperature viability protein Ltv1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6608572.1 Protein LTV1-like protein, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-152

82.27

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Query:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA
        MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF          GGPA
Subjt:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA

Query:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGT---------------------------------
        SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGT                                 
Subjt:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGT---------------------------------

Query:  --------------------IWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQ
                            +WDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQ
Subjt:  --------------------IWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQ

Query:  QKRKLHGQESKEEKKERKAAVKEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM
        QKRKLHGQESKEEKKERKAAVKEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM
Subjt:  QKRKLHGQESKEEKKERKAAVKEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM

KAG7037890.1 Protein LTV1-like protein [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-162

100

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Query:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGFGGPASLPENVRREI
        MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGFGGPASLPENVRREI
Subjt:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGFGGPASLPENVRREI

Query:  LELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGTIWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSK
        LELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGTIWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSK
Subjt:  LELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGTIWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSK

Query:  NSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAVKEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM
        NSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAVKEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM
Subjt:  NSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAVKEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM

XP_022940362.1 protein LTV1 homolog [Cucurbita moschata]

6.9e-132

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Query:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA
        MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF          GGPA
Subjt:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA

Query:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGT---------------------------------
        SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGT                                 
Subjt:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGT---------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------------I
                                                                                                           +
Subjt:  ---------------------------------------------------------------------------------------------------I

Query:  WDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAV
        WDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAV
Subjt:  WDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAV

Query:  KEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM
        KEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM
Subjt:  KEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM

XP_022981924.1 protein LTV1 homolog [Cucurbita maxima]

7.7e-131

54.63

Show/hide

Query:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA
        MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF          GGPA
Subjt:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA

Query:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGT---------------------------------
        SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDA+GVIVSQGT                                 
Subjt:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGT---------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------------I
                                                                                                           +
Subjt:  ---------------------------------------------------------------------------------------------------I

Query:  WDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAV
        WDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAV
Subjt:  WDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAV

Query:  KEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM
        KEARREARRTKKELKELY GETHRAQKVVAVSGPASIHLM
Subjt:  KEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM

XP_023525399.1 protein LTV1 homolog [Cucurbita pepo subsp. pepo]

5.9e-131

54.63

Show/hide

Query:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA
        MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF          GGPA
Subjt:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA

Query:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGT---------------------------------
        SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGV+VSQGT                                 
Subjt:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGT---------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------------I
                                                                                                           +
Subjt:  ---------------------------------------------------------------------------------------------------I

Query:  WDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAV
        WDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHG ESKEEKKERKAAV
Subjt:  WDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAV

Query:  KEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM
        KEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM
Subjt:  KEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L517 Uncharacterized protein

2.0e-108

47.13

Show/hide

Query:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA
        MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLP FDDGPVDASGSA ++E+PNSIFADA +DYD+EENGGF          GG +
Subjt:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA

Query:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVS------------------------------------
        SLPENVR++ILELGFPDDGYNYLLHLR+IKNTGGGS FY NPKAKLNQ+PRDEKAYDAS +IVS                                    
Subjt:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVS------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------QGT
                                                                                                         +  
Subjt:  -------------------------------------------------------------------------------------------------QGT

Query:  IWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAA
        +WDCETIVSTCSNLNNHPGKI+APE+TRRKKLAETV+GALNS N +ITL+GKEKLPV+FLPHGRK VDKVKD  +L+TE QKRK HGQESKEEKKERKAA
Subjt:  IWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAA

Query:  VKEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM
        +KEARREARRTKKE K LYK E HRAQKVVA SGPASIHLM
Subjt:  VKEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM

A0A1S3BKZ8 protein LTV1 homolog

6.8e-109

47.13

Show/hide

Query:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA
        MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLP FDDGPVDASGSA ++E+PNSIFADA +DYD+EENGGF          GG +
Subjt:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA

Query:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVS------------------------------------
        SLPENVRREILELGFPDDGYNYLLHLR+IKNTGGGS FY NPKAKLNQ+PRDEKAYDAS ++VS                                    
Subjt:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVS------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------QGT
                                                                                                         +  
Subjt:  -------------------------------------------------------------------------------------------------QGT

Query:  IWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAA
        +WDCETIVSTCSNLNNHPGKI+APE+TRRKKLAETV+GALNS N +ITL+GKEKLPV+FLPHGRK V+KVKD  +L+TE QKRK HGQESKEEKKERKAA
Subjt:  IWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAA

Query:  VKEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM
        +KEARREARRTKKE+K LYK E HRAQKVVA SGPASIHLM
Subjt:  VKEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM

A0A5D3CI19 Protein LTV1-like protein

6.8e-109

47.13

Show/hide

Query:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA
        MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLP FDDGPVDASGSA ++E+PNSIFADA +DYD+EENGGF          GG +
Subjt:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA

Query:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVS------------------------------------
        SLPENVRREILELGFPDDGYNYLLHLR+IKNTGGGS FY NPKAKLNQ+PRDEKAYDAS ++VS                                    
Subjt:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVS------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------QGT
                                                                                                         +  
Subjt:  -------------------------------------------------------------------------------------------------QGT

Query:  IWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAA
        +WDCETIVSTCSNLNNHPGKI+APE+TRRKKLAETV+GALNS N +ITL+GKEKLPV+FLPHGRK V+KVKD  +L+TE QKRK HGQESKEEKKERKAA
Subjt:  IWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAA

Query:  VKEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM
        +KEARREARRTKKE+K LYK E HRAQKVVA SGPASIHLM
Subjt:  VKEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM

A0A6J1FJD8 protein LTV1 homolog

3.4e-132

Show/hide

Query:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA
        MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF          GGPA
Subjt:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA

Query:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGT---------------------------------
        SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGT                                 
Subjt:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGT---------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------------I
                                                                                                           +
Subjt:  ---------------------------------------------------------------------------------------------------I

Query:  WDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAV
        WDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAV
Subjt:  WDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAV

Query:  KEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM
        KEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM
Subjt:  KEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM

A0A6J1J360 protein LTV1 homolog

3.7e-131

54.63

Show/hide

Query:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA
        MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF          GGPA
Subjt:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGF----------GGPA

Query:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGT---------------------------------
        SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDA+GVIVSQGT                                 
Subjt:  SLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGT---------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------------------------------------------I
                                                                                                           +
Subjt:  ---------------------------------------------------------------------------------------------------I

Query:  WDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAV
        WDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAV
Subjt:  WDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAV

Query:  KEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM
        KEARREARRTKKELKELY GETHRAQKVVAVSGPASIHLM
Subjt:  KEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM

SwissProt top hits

e value

%identity

Alignment

Q0VC06 Protein LTV1 homolog

1.2e-04

28.51

Show/hide

Query:  DDYDDEE-----NGGFGGPASLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGTIWDCETIVSTCSN
        + YDD+E     N    G   +  N   E+L   + +   N  + L  ++        + +    +N+L   E+    + V+      WDCE+I ST SN
Subjt:  DDYDDEE-----NGGFGGPASLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGTIWDCETIVSTCSN

Query:  LNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPH---GRKVVDKVK--DNGSL-KTEQQKRKLHGQESKEEKKERKAAVKEARRE
        + NHP  I                     K   I L  K  +P++ LP      K V++++  +N  L KT  Q R    +ESKE+K+ RK A+KE R+E
Subjt:  LNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPH---GRKVVDKVK--DNGSL-KTEQQKRKLHGQESKEEKKERKAAVKEARRE

Query:  ARRTKKELKELYKGETHRAQK
         R  KK  K  +K E  R +K
Subjt:  ARRTKKELKELYKGETHRAQK

Q4V838 Protein LTV1 homolog

3.0e-05

34.23

Show/hide

Query:  DEKAYDASGVIVSQ-GTIWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGR----KVVDKVKDNGSLKTE
        DE   D   +++ +    WDCE+I+ST SNL NHP  I  P                  K  +I +  K  +P+D LP GR    K V++++   S    
Subjt:  DEKAYDASGVIVSQ-GTIWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGR----KVVDKVKDNGSLKTE

Query:  QQKRKLHGQESKEEKKERKAAVKEARREARRTKKELKELYKGETHRAQK
        +        ESKEE+K RK A+KE R+E R  KK  K  +K E  R  K
Subjt:  QQKRKLHGQESKEEKKERKAAVKEARREARRTKKELKELYKGETHRAQK

Q68FR7 Protein LTV1 homolog

1.5e-04

32.68

Show/hide

Query:  NQLPRDEKAYDASGVIVSQGTIWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKD----NGS
        N+L   EK    + V+      WDCE+I ST SNL NHP  I                     K   I L  K  +P+  LP       +V+     N S
Subjt:  NQLPRDEKAYDASGVIVSQGTIWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKD----NGS

Query:  LKTEQQKRKLHGQESKEEKKERKAAVKEARREARRTKKELKELYKGETHRAQK
           +   +     ESKE+KK RK A+KE R+E R  KK  K  +K E  R +K
Subjt:  LKTEQQKRKLHGQESKEEKKERKAAVKEARREARRTKKELKELYKGETHRAQK

Q6NSQ7 Protein LTV1 homolog

5.2e-05

32.03

Show/hide

Query:  NQLPRDEKAYDASGVIVSQGTIWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKD----NGS
        N+L   EK    + V+      WDCE+I ST SNL NHP  I                     K   I L  K  +P++ LP       +V+     NGS
Subjt:  NQLPRDEKAYDASGVIVSQGTIWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKD----NGS

Query:  LKTEQQKRKLHGQESKEEKKERKAAVKEARREARRTKKELKELYKGETHRAQK
           +   +     E+KE+K+ RK A+KE R+E R  KK  K  +K E  R +K
Subjt:  LKTEQQKRKLHGQESKEEKKERKAAVKEARREARRTKKELKELYKGETHRAQK

Q96GA3 Protein LTV1 homolog

3.4e-04

26.94

Show/hide

Query:  DDYDDEE-----NGGFGGPASLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGTIWDCETIVSTCSN
        + YDD+E     N    G   +  N  +E+L   + +   N  + L  ++          +    +N+L   E+    + V+      WDCE+I ST SN
Subjt:  DDYDDEE-----NGGFGGPASLPENVRREILELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGTIWDCETIVSTCSN

Query:  LNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPH---GRKVVDKVK-DNGSLKTEQQKRKLHGQESKEEKKERKAAVKEARREAR
        L NHP  I                     K   I +  K  +P++ LP      K  ++++  NGS   +   +     ESKE+K+ RK A+KE R+E R
Subjt:  LNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPH---GRKVVDKVK-DNGSLKTEQQKRKLHGQESKEEKKERKAAVKEARREAR

Query:  RTKKELKELYKGETHRAQK
          KK  K  +K E  R +K
Subjt:  RTKKELKELYKGETHRAQK

Arabidopsis top hits

e value

%identity

Alignment

AT3G49990.1 unknown protein

1.6e-49

32.61

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Query:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGFGGPASLPENVRREI
        MGKKKF DKKK+ATF+L  RD+SDP Y      D++F+RVD +    PV  +G ++       EE  +S F DAP++ D   +      +SLP +VR+EI
Subjt:  MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGFGGPASLPENVRREI

Query:  LELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVS----------------------------------------------
        LELG+PDDGYNYL HLR+IKNTGGGS FY NPK ++ QLPRD KAYDAS V +S                                              
Subjt:  LELGFPDDGYNYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVS----------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------QGTIWDCETIVSTCSNLNNHPGKIVAPEITRRKK
                                                                          +    DCETIVST SNL+N PGKI+A E  R+KK
Subjt:  ------------------------------------------------------------------QGTIWDCETIVSTCSNLNNHPGKIVAPEITRRKK

Query:  LAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAVKEARREARRTKKELKELYKGETHRAQKVVA
        L+ET++ AL+S   +I L+G+E++PV+FLP  R     VK     K E  KRK HGQESKEEKKERK AVK  +REAR  KK+ K LY GET RAQ+ VA
Subjt:  LAETVSGALNSKNSMITLKGKEKLPVDFLPHGRKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAVKEARREARRTKKELKELYKGETHRAQKVVA

Query:  VSGPAS
         SGP+S
Subjt:  VSGPAS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGGAAGAAGAAGTTCTTCGACAAGAAGAAATCCGCAACTTTCCAATTACTTGCGCGTGACTCATCCGATCCCAATTACGATGGAACTGCCGCCACCGACCGTGTTTT
TGTTCGTGTCGACAACCACTCTTATACTCTCCCTGTCTTCGACGATGGTCCTGTCGATGCTTCCGGTTCTGCCTCCTTTGAGGAAAACCCTAACTCGATCTTTGCCGATG
CTCCTGACGATTACGACGATGAAGAGAACGGAGGTTTTGGTGGACCTGCGTCGTTACCGGAAAATGTTAGAAGGGAAATTCTCGAGCTGGGTTTTCCTGACGATGGTTAC
AATTATTTGCTGCATCTTCGGGATATTAAGAATACTGGTGGTGGTTCGGCGTTTTATAATAACCCCAAGGCCAAGCTGAATCAGCTTCCACGCGATGAGAAGGCGTATGA
TGCCTCCGGAGTGATTGTTTCTCAAGGAACCATTTGGGACTGTGAAACTATTGTTTCTACATGTTCTAATCTCAATAACCATCCTGGAAAGATTGTAGCTCCTGAAATAA
CCAGAAGGAAGAAGTTGGCTGAAACTGTCTCTGGAGCCCTTAATTCTAAAAATTCTATGATAACTCTCAAGGGGAAAGAGAAGCTACCAGTGGACTTTCTACCTCATGGT
CGAAAAGTTGTTGACAAAGTGAAAGATAATGGCAGCTTGAAAACTGAACAACAGAAGAGAAAGCTGCACGGTCAGGAGTCCAAGGAAGAGAAGAAGGAGAGGAAGGCTGC
TGTCAAGGAAGCACGACGTGAAGCACGGCGCACAAAAAAAGAATTGAAGGAACTTTACAAGGGGGAAACTCATCGTGCTCAGAAAGTAGTTGCTGTTTCTGGTCCAGCAT
CTATTCATCTTATGTGA

mRNA sequence

Show/hide mRNA sequence

TTTTGGAGCAGAGGGTTTATCTCACAAATCCGCAGCGCAGAGTCTACTGATATTCTTCGATTCGCAATGGGGAAGAAGAAGTTCTTCGACAAGAAGAAATCCGCAACTTT
CCAATTACTTGCGCGTGACTCATCCGATCCCAATTACGATGGAACTGCCGCCACCGACCGTGTTTTTGTTCGTGTCGACAACCACTCTTATACTCTCCCTGTCTTCGACG
ATGGTCCTGTCGATGCTTCCGGTTCTGCCTCCTTTGAGGAAAACCCTAACTCGATCTTTGCCGATGCTCCTGACGATTACGACGATGAAGAGAACGGAGGTTTTGGTGGA
CCTGCGTCGTTACCGGAAAATGTTAGAAGGGAAATTCTCGAGCTGGGTTTTCCTGACGATGGTTACAATTATTTGCTGCATCTTCGGGATATTAAGAATACTGGTGGTGG
TTCGGCGTTTTATAATAACCCCAAGGCCAAGCTGAATCAGCTTCCACGCGATGAGAAGGCGTATGATGCCTCCGGAGTGATTGTTTCTCAAGGAACCATTTGGGACTGTG
AAACTATTGTTTCTACATGTTCTAATCTCAATAACCATCCTGGAAAGATTGTAGCTCCTGAAATAACCAGAAGGAAGAAGTTGGCTGAAACTGTCTCTGGAGCCCTTAAT
TCTAAAAATTCTATGATAACTCTCAAGGGGAAAGAGAAGCTACCAGTGGACTTTCTACCTCATGGTCGAAAAGTTGTTGACAAAGTGAAAGATAATGGCAGCTTGAAAAC
TGAACAACAGAAGAGAAAGCTGCACGGTCAGGAGTCCAAGGAAGAGAAGAAGGAGAGGAAGGCTGCTGTCAAGGAAGCACGACGTGAAGCACGGCGCACAAAAAAAGAAT
TGAAGGAACTTTACAAGGGGGAAACTCATCGTGCTCAGAAAGTAGTTGCTGTTTCTGGTCCAGCATCTATTCATCTTATGTGAGGGAGAGCTTCTTGATGCTACATAATT
GGACAATTTTTCATTGTGACAAAGATCGAAATACTGGGGAGAAGTTCTTGAAACAATTCTTATATGGAACGAAGTAGAGACCATGATCTATATGCTTGGAGAAGGGAGAG
TAGACAAGAAATGGGACAATCTGTTCAATGATTCCTTGGTGTCCACCACGGACCAATTCTTTATATGTTTAGTTTAAAGAGAGCTTCTGTAACTCATCTTGAAATGTTCC
AATCAAAGCATATTTATTTTAAACTAAAGTCGGTTGCTTCAACTTGTACTTTGGCAAGGACCATAAATAGTCGAGTTTACAAGTGGCAAGATAATCGTGTATTTTTGTTT
ACTCCTATGGCAATTTAAGTTTAAAGTGATGACAATTCTTCTTGAATGAATCTATTCAGTGTTCTTTGTATGTTTATTCAAAATGAACCATCCTCTTTTTCCAGGTCCTC
AACGATTGGACCAACGAATCGAATCTAGAGGGAAGGAGAAGCTCTCAGACAAAGGTAACAATCCAAACCAAAACTACGAAAAGTTCATTTCTTATATCTTCGGATTACTC
CCTGAATACATCTTACTATTGCGATTTCTATCTTCTCTTAGCAATTTAATAGTATTGTAACCATGTGTGGCACCATTTGTAAAGGATGATACAATGAAAGTATATATAGT
TAGCGTCATATGAAGAGCAAGTGTATTACGATAGCATCACACCAGAACAACTCGATGTTTCAGGGTCTTGCTTGGACTTCATGGGGAATGGGGTCTGCATATCCTCCTCC
AAACACAGGGGTTGGGTTCCAGTACCCGTAGTCTGCTACAATTTCTGACAGAACCTTGAAACGACTGTGATCTCCCTTCACCTCAGATTCATGGATGCCATGAGGGGTTG
TCGAGGGTGCCGCTGATAATGGCGACAACAAACGTGATCCTGCAGCTGTTTTGGATAATGCTGTTATTATAGTGAACGTCATTACACCGAAGAATAAAGAGTAAAGAAAG
GAAGCAAGTGTCACTCCTGCCATGCTATATCTGTGTGGTATCTAACTCCCTGCAGTTCAAGATTGTCCCAAGTTTTAAAGGCAATGAAGTGTCCTAATTTATGAGGCGTG
GGACTTGGTTGAGGACTGGATCAAAGCATGAGCAGTGTTTGAACTAAATTGAATTTTCCTGTCATGCGAGGTGGATGACATGTCATGTTTCTTTCATGCATGTGGTGTTT
TATTAAAATGGATTTGCAAAATGAGAATCCACTTGCATGAGACTATCATTGATTCATTCTCCTCCCTAATCGATGTAGGAGTGAATTGTGGGATC

Protein sequence

Show/hide protein sequence

MGKKKFFDKKKSATFQLLARDSSDPNYDGTAATDRVFVRVDNHSYTLPVFDDGPVDASGSASFEENPNSIFADAPDDYDDEENGGFGGPASLPENVRREILELGFPDDGY
NYLLHLRDIKNTGGGSAFYNNPKAKLNQLPRDEKAYDASGVIVSQGTIWDCETIVSTCSNLNNHPGKIVAPEITRRKKLAETVSGALNSKNSMITLKGKEKLPVDFLPHG
RKVVDKVKDNGSLKTEQQKRKLHGQESKEEKKERKAAVKEARREARRTKKELKELYKGETHRAQKVVAVSGPASIHLM

Carg17176 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome